SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06787  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012116
Annotation
PREDICTED:_SUMO-activating_enzyme_subunit_2_[Amyelois_transitella]
Full name
SUMO-activating enzyme subunit      
Location in the cell
Cytoplasmic   Reliability : 2.149 Nuclear   Reliability : 1.709
 

Sequence

CDS
ATGGTCGCGAGGGTCGCTGGCGTTTTCGATGAGAAATTGACAGAAGCTATTGCAAATTCTAAATTGCTGGTAGTGGGCGCCGGCGGCATTGGTTGTGAGATCCTTAAAAATCTCGTGCTAACCGGCTTCCCATATATTGAAATTATCGACCTTGATACTATCGACGTAAGCAACTTGAATCGTCAGTTTCTTTTTCACAAAGAGCATGTTGGGAAATCAAAGGCTCAAGTTGCAAAGGATAGCGCCCTTAGTTTCAACCCTAACGTAACAATCGTAGCTCACCATGACAGTGTAATCAGCAATGACTATGGTGTAAAATACTTCAAACAGTTCAACATTGTGATGAATGCACTGGACAATCGTGTTGCCCGTAACCATGTTAATAGATTGTGTCTTGCTGCTGATGTACCTCTTATAGAGACAGGTACAGCAGGATATGCTGGTCAGGTGGAGCTCATCAAGAAAGGTCTGACTCAATGTTATGAATGCCAGCCTAAAGCACCACAGAAATCATTCCCAGGTTGCACAATTCGTAATACACCTTCAGAACCTATTCACTGCATTGTATGGGCAAAACACCTCTTCAACCAATTGTTTGGAGAAGAAGACCCTGATCAAGATGTGAGTCCTGATACAGCTGACCCTGAGGCTGCAGGTGATGCTGGACAATCAGCGTTGTCTAATGAAAGTACTACTGCCGGTAATGTTGAAAGAAAAAGTACCAGAGCCTGGGCAGCAGAAACTAATTATGAACCAGAAAAGTTATTCACAAAATTATTTGGTGATGATATCCGTTACTTACTATCTATGGAGAATTTGTGGAAGAAACGTCGGCCTCCCACTCCACTGTCATGGGAAAATCTACCTGGAAAAGATGCTCCAAAAATTCAACATTCAGGGTTGCCAGACCAAAGAGTTTGGACAGTATATGAATGTGCACAAGTATTTGCAGCAAGCTGCAAGGCTCTACAGACAGATTTGAAATCGCGTCCGGGTGACGACCATCTTGTATGGGACAAAGATGAAAAAAGTGCCATGGATTTTGTAACTGCCTGTGCTAACATACGCGCACATATCTTTAATATACCACTAAAATCACGATTCGAAATCAAATCAATGGCAGGTAACATCATTCCGGCAATCGCAACGGCCAATGCAATAGTGGCTGGTCTGGCTGTGTTACGTGCACAGTCCATACTGAAAGGAGAAATAGAAAGCTGCACTAGTGTGTACTTGAGACCTAAAGTAAACCACAGGGGACAGCTTTTTGTTCCTGAAAAAACATTAACTCCACCTAATCCTAAGTGCTATGTCTGTCCCCCAAAGCCAGAAGTGGCTCTAGCATGCAACTTGAAAAAACTCACATTGAAAGACCTAGATACGGCTTTCAAAGAGGGCTTAAACATGCAAGCCCCAGACGCCAGTGTAGAAGGCAAAGGTCTTGTTATTTTATCTTCCGAACCAGGAGAAACTGAACACAACAATGACAAAACTCTGGAACAAATCGGCTTGAATGACGGCTGTGCATTACTTGTGGATGATTTCTTACAAAACTATGAAGTCAGGGTCAGACTGCAGCAGGAAGATGAAGAAAATTCTTGGCGGCTGGTAACAGATACCGATGAACCGATGCCGGCGCCTAAAGCAGCAGAAAATTCCGCTAACGGCTCCAATGGCGCTAAGGATCCTGCACCAGGACCTTCCAGATCTCGCCAGGACAGCGACAGTGATATGGAGATAATCGAGGAAGATGACGACGAACCCACAATGAAACCACCTAAGCGCAGGCGTGTCGAAATGTCAGATGAAGTTGTCGAAATATGTTAA
Protein
MVARVAGVFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAADVPLIETGTAGYAGQVELIKKGLTQCYECQPKAPQKSFPGCTIRNTPSEPIHCIVWAKHLFNQLFGEEDPDQDVSPDTADPEAAGDAGQSALSNESTTAGNVERKSTRAWAAETNYEPEKLFTKLFGDDIRYLLSMENLWKKRRPPTPLSWENLPGKDAPKIQHSGLPDQRVWTVYECAQVFAASCKALQTDLKSRPGDDHLVWDKDEKSAMDFVTACANIRAHIFNIPLKSRFEIKSMAGNIIPAIATANAIVAGLAVLRAQSILKGEIESCTSVYLRPKVNHRGQLFVPEKTLTPPNPKCYVCPPKPEVALACNLKKLTLKDLDTAFKEGLNMQAPDASVEGKGLVILSSEPGETEHNNDKTLEQIGLNDGCALLVDDFLQNYEVRVRLQQEDEENSWRLVTDTDEPMPAPKAAENSANGSNGAKDPAPGPSRSRQDSDSDMEIIEEDDDEPTMKPPKRRRVEMSDEVVEIC

Summary

Subunit
Heterodimer.
Similarity
Belongs to the ubiquitin-activating E1 family.
EMBL
BABH01016361    ODYU01001443    SOQ37643.1    KQ459252    KPJ02113.1    AGBW02014303    + More
OWR41906.1    RSAL01000107    RVE47291.1    GAIX01004929    JAA87631.1    NWSH01003386    PCG66409.1    NEVH01014359    PNF27775.1    KK852879    KDR14472.1    KZ288282    PBC29592.1    NNAY01003438    OXU19417.1    KQ435726    KOX78175.1    KQ414584    KOC70649.1    GECU01014816    JAS92890.1    CH477677    EAT37350.1    GAPW01000470    JAC13128.1    GL768105    EFZ12246.1    JXUM01056951    KQ561933    KXJ77119.1    ADTU01020341    KQ981652    KYN38631.1    DS231987    EDS30540.1    GL888190    EGI65454.1    GFDL01013939    JAV21106.1    DS235269    EEB14098.1    GL437703    EFN70089.1    KK107238    QOIP01000007    EZA54639.1    RLU20620.1    KQ981126    KYN09312.1    KQ982584    KYQ54419.1    KQ977890    KYM98974.1    LBMM01001137    KMQ96839.1    KQ976395    KYM93103.1    GL446209    EFN88226.1    GBYB01015168    JAG84935.1    GANO01000712    JAB59159.1    UFQS01000126    UFQT01000126    SSX00138.1    SSX20518.1    AXCM01002194    GECZ01027853    GECZ01023694    JAS41916.1    JAS46075.1    ADMH02001096    ETN64121.1    APCN01000707    GGFJ01002936    MBW52077.1    GGFJ01002934    MBW52075.1    GGFJ01002933    MBW52074.1    AAAB01008944    EAA10202.3    GGFK01007410    MBW40731.1    GGFK01007451    MBW40772.1    NEDP02076706    OWF35811.1    ATLV01021268    KE525315    KFB46233.1    AXCN02002080    HACG01044536    CEK91401.1    CVRI01000020    CRK91061.1    AJVK01009248    JH816675    EKC24155.1    JRES01000997    KNC26267.1    GEDC01007604    JAS29694.1    KB201262    ESO98215.1    GFDF01004660    JAV09424.1    LJIG01016014    KRT81872.1    PZQS01000012    PVD20729.1    LSMT01000246    PFX22234.1    GEZM01085156    JAV60173.1    CCAG010017310    JXJN01012081    RCHS01002146    RMX49378.1    GDIP01007383    JAM96332.1    GDIP01146787    JAJ76615.1    GDIP01239485    GDIP01230635    GDIP01071953    JAI83916.1    GDIP01120743    GDIP01082681    JAL82971.1    GDIP01124894    GDIP01038205    JAM65510.1    GDIP01222325    JAJ01077.1    GDIQ01068658    JAN26079.1    LRGB01000642    KZS17193.1    GDIP01071952    JAM31763.1    CCAG010007952   
Pfam
PF14732   UAE_UbL        + More
PF10585   UBA_e1_thiolCys
PF00899   ThiF
PF12796   Ank_2
PF16195   UBA2_C
PF07707   BACK
PF00651   BTB
Interpro
IPR023318   Ub_act_enz_dom_a_sf        + More
IPR000011   UBQ/SUMO-activ_enz_E1-like       
IPR028077   UAE_UbL_dom       
IPR019572   UBA_E1_Cys       
IPR035985   Ubiquitin-activating_enz       
IPR000594   ThiF_NAD_FAD-bd       
IPR033127   UBQ-activ_enz_E1_Cys_AS       
IPR030661   Uba2       
IPR036770   Ankyrin_rpt-contain_sf       
IPR020683   Ankyrin_rpt-contain_dom       
IPR002110   Ankyrin_rpt       
IPR032426   UBA2_C       
IPR011705   BACK       
IPR011333   SKP1/BTB/POZ_sf       
IPR000210   BTB/POZ_dom       
SUPFAM
SSF69572   SSF69572        + More
SSF48403   SSF48403       
SSF54695   SSF54695       
Gene 3D
PDB
3KYD     E-value=2.91026e-163,     Score=1478

Ontologies

Topology

Length:
608
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.71592
Exp number, first 60 AAs:
0.70552
Total prob of N-in:
0.05175
outside
1  -  608
 
 

Population Genetic Test Statistics

Pi
5.226232
Theta
14.376044
Tajima's D
-1.618822
CLR
1.291564
CSRT
0.0439978001099945
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 YPPARTPKTSYQQYNVCTCSLCAEEAGAAVRLVLVDGSPAYVATHTTRGRTRGQSRGGSRGQRTGPAAADEADALAYFAQLFRDIDAAKVLLYGIL 97.14 1e-17
25044914 VWSVPDCAPIQVIK 100.00 4e-06
26822097 AHIFNIPIK 100.00 6e-04
25044914 NTMEYCYK 100.00 6e-04
28556443 LQQEDEENSWR 100.00 6e-04
28556443 VPHLTLPATVYVSSIH 100.00 8e-04
28556443 IQHSGLPDQR 100.00 0.002
26822097 AWAAETNYEPEK 100.00 0.007
25044914 SAKPPVECNTQDSINFNTIYIR 100.00 0.007
28556443 LLVVGAGGIGCEILK 100.00 0.039
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