Gene

KWMTBOMO06785

Pre Gene Modal

BGIBMGA012117

Annotation

PREDICTED:_uncharacterized_protein_C20orf24_homolog_[Plutella_xylostella]

Location

Bomo_Chr11(-):14872353-14873281      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.75

CDS

ATGTCCACAAAAGCTAAACAAACGGACAATATAAATAAAAATAAGTGCAACGAGTCAATATGGAAAAAAGCTCTTGATAAGAATTCCGAATGGCCTGACAAGGAAGAATTTTTAGACGTAATATATTGGATGCGCCAGGCTATAGGAATCATTTTGGGACTATCTTGGGGGCTGTTGCCATTGAAAGGATTTCTGGGACTGCTATTGTTTGTCATTTTGAATGCAGCAGTAATATATGTATACGTAAATAATTTCCACAACATTGATGAAGAGGAATATGGTGGGATGTGGGAAATTACTAAAGAAGGCTTTATGACTTCATTTGCTGGATTTTTAGTGACGTGGATTATAATGTACACAGGATTGCATTCGGAAAAATTATGA

Protein

MSTKAKQTDNINKNKCNESIWKKALDKNSEWPDKEEFLDVIYWMRQAIGIILGLSWGLLPLKGFLGLLLFVILNAAVIYVYVNNFHNIDEEEYGGMWEITKEGFMTSFAGFLVTWIIMYTGLHSEKL

Uniprot

H9JRF7   S4P7L3   A0A2A4J5N6   A0A212F816   A0A194QPM7   A0A194Q9E9   + More
E9JBC4   A0A087ZZK1   A0A3L8D8I4   A0A154PLJ0   E2AID3   A0A0L7QND4   A0A2H1V9Y6   A0A151JSJ6   F4WFX6   A0A151XBJ2   A0A2P8XEH9   A0A195BHA3   A0A158NL41   E2BKH5   A0A1B6KN63   A0A1B6F2H1   A0A067QXU3   A0A1B6K575   J3JX21   A0A1B6J0J1   A0A0L7L8Y9   A0A1B6C9C1   D6WF12   A0A069DNM7   E9FUC9   A0A0P4VND6   R4FLR2   A0A182JK09   A0A0V0GAF9   T1ISB2   U5ES66   A0A023F9H2   T1DGX0   A0A0P6FRD9   A0A0P6DPA1   A0A232F4K5   K7J5V7   A0A026WX51   A0A2M4AM78   A0A0P5FEN7   A0A0A9Y9A6   A0A182WMJ4   A0A182QUU4   A0A2M3ZBQ2   A0A3Q1G740   A0A3B4YW58   A0A3Q1CV86   A0A3P8SGX6   A0A023EFU4   W5JNI3   C3YGI4   A0A182MX43   A0A3B3ZVV8   A0A2A3EIG9   A0A182P0L5   A0A3Q3LZ50   A0A3Q1HFP9   A0A2M3ZAU3   A0A182NV25   A0A182UPS9   A0A0P7UL01   A0A182HXU5   A0A0L0CBG6   A0A182WS49   A0A182LHV9   Q7PCZ1   Q17PR8   A0A3B4YY35   A0A3B4UY02   T1GR59   A0A3Q3ELN2   A0A1D2MMH0   A0A3Q1BLG8   A0A182FCS8   A0A0K8TNV6   A0A3B4EUF0   A0A3Q2WGD6   A0A3P8RB09   A0A3P9DMN4   A0A3Q2XY05   A0A3Q4HB72   A0A2J7PJI9   I3KLI6   A0A2U9C020   A0A182U5N0   A0A3B4EV55   A0A3Q2V0N3   A0A1I8PD71   A0A3P8X156   A0A3B4EGC8   A0A2D0SHV0   A0A146NSK1   A0A3M6UBR5   A0A3Q2YWM4  

Pubmed

19121390    23622113    22118469    26354079    21282665    30249741    + More
20798317    21719571    29403074    21347285    24845553    22516182    23537049    26227816    18362917    19820115    26334808    21292972    27129103    25474469    24330624    28648823    20075255    24508170    25401762    26823975    24945155    20920257    23761445    18563158    25463417    26108605    20966253    9087549    12364791    14747013    17210077    17510324    27289101    26369729    25186727    24487278    30382153   

EMBL

BABH01016361    GAIX01004539    JAA88021.1    NWSH01003235    PCG66712.1    AGBW02009812    + More
OWR49861.1    KQ461185    KPJ07488.1    KQ459252    KPJ02128.1    GL770984    EFZ09875.1    QOIP01000011    RLU16817.1    KQ434938    KZC12148.1    GL439757    EFN66808.1    KQ414855    KOC60152.1    ODYU01001443    SOQ37647.1    KQ978530    KYN30327.1    GL888128    EGI66743.1    KQ982320    KYQ57742.1    PYGN01002498    PSN30382.1    KQ976488    KYM83534.1    ADTU01019238    GL448795    EFN83815.1    GEBQ01027084    JAT12893.1    GECZ01025395    JAS44374.1    KK852833    KDR15294.1    GECU01001393    JAT06314.1    APGK01042948    BT127789    KB741011    AEE62751.1    ENN75530.1    GECU01015002    JAS92704.1    JTDY01002235    KOB71830.1    GEDC01027202    GEDC01018468    JAS10096.1    JAS18830.1    KQ971319    EFA00303.1    GBGD01003479    JAC85410.1    GL732525    EFX88703.1    GDKW01002728    JAI53867.1    ACPB03001895    GAHY01002029    JAA75481.1    GECL01001364    JAP04760.1    JH431429    GANO01003386    JAB56485.1    GBBI01001063    JAC17649.1    GALA01000027    JAA94825.1    GDIQ01061579    JAN33158.1    GDIP01055427    GDIQ01074411    LRGB01000868    JAM48288.1    JAN20326.1    KZS15652.1    NNAY01000999    OXU25542.1    KK107078    EZA60423.1    GGFK01008572    MBW41893.1    GDIQ01255607    JAJ96117.1    GBHO01015931    GBRD01012107    GDHC01004615    JAG27673.1    JAG53717.1    JAQ14014.1    AXCN02001004    GGFM01005170    MBW25921.1    GAPW01005872    JAC07726.1    ADMH02000839    ETN64878.1    GG666511    EEN60705.1    AXCM01011154    KZ288230    PBC31593.1    GGFM01004860    MBW25611.1    JARO02001569    KPP75051.1    APCN01005350    JRES01000655    KNC29565.1    AAAB01008312    AAAB01008905    EAA03352.4    EAA09701.4    CH477189    EAT48773.1    CAQQ02004896    LJIJ01000841    ODM94217.1    GDAI01001554    JAI16049.1    NEVH01024946    PNF16507.1    AERX01002800    CP026253    AWP09811.1    GCES01152332    JAQ33990.1    RCHS01001811    RMX51137.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000005203    + More
UP000279307    UP000076502    UP000000311    UP000053825    UP000078492    UP000007755    UP000075809    UP000245037    UP000078540    UP000005205    UP000008237    UP000027135    UP000019118    UP000037510    UP000007266    UP000000305    UP000015103    UP000075880    UP000076858    UP000215335    UP000002358    UP000053097    UP000075920    UP000075886    UP000257200    UP000261400    UP000257160    UP000265080    UP000000673    UP000001554    UP000075883    UP000261520    UP000242457    UP000075885    UP000261640    UP000265040    UP000075884    UP000075903    UP000034805    UP000192224    UP000075840    UP000037069    UP000076407    UP000075882    UP000007062    UP000008820    UP000261360    UP000261420    UP000015102    UP000261660    UP000094527    UP000069272    UP000261460    UP000264840    UP000265100    UP000265160    UP000264820    UP000261580    UP000235965    UP000005207    UP000246464    UP000075902    UP000095300    UP000265120    UP000261440    UP000221080    UP000265000    UP000275408   

PRIDE

H9JRF7   

Pfam

PF07019   Rab5ip

Interpro

IPR010742   Rab5ip        + More
IPR029008   Rab5IP_fam       

ProteinModelPortal

H9JRF7   S4P7L3   A0A2A4J5N6   A0A212F816   A0A194QPM7   A0A194Q9E9   + More
E9JBC4   A0A087ZZK1   A0A3L8D8I4   A0A154PLJ0   E2AID3   A0A0L7QND4   A0A2H1V9Y6   A0A151JSJ6   F4WFX6   A0A151XBJ2   A0A2P8XEH9   A0A195BHA3   A0A158NL41   E2BKH5   A0A1B6KN63   A0A1B6F2H1   A0A067QXU3   A0A1B6K575   J3JX21   A0A1B6J0J1   A0A0L7L8Y9   A0A1B6C9C1   D6WF12   A0A069DNM7   E9FUC9   A0A0P4VND6   R4FLR2   A0A182JK09   A0A0V0GAF9   T1ISB2   U5ES66   A0A023F9H2   T1DGX0   A0A0P6FRD9   A0A0P6DPA1   A0A232F4K5   K7J5V7   A0A026WX51   A0A2M4AM78   A0A0P5FEN7   A0A0A9Y9A6   A0A182WMJ4   A0A182QUU4   A0A2M3ZBQ2   A0A3Q1G740   A0A3B4YW58   A0A3Q1CV86   A0A3P8SGX6   A0A023EFU4   W5JNI3   C3YGI4   A0A182MX43   A0A3B3ZVV8   A0A2A3EIG9   A0A182P0L5   A0A3Q3LZ50   A0A3Q1HFP9   A0A2M3ZAU3   A0A182NV25   A0A182UPS9   A0A0P7UL01   A0A182HXU5   A0A0L0CBG6   A0A182WS49   A0A182LHV9   Q7PCZ1   Q17PR8   A0A3B4YY35   A0A3B4UY02   T1GR59   A0A3Q3ELN2   A0A1D2MMH0   A0A3Q1BLG8   A0A182FCS8   A0A0K8TNV6   A0A3B4EUF0   A0A3Q2WGD6   A0A3P8RB09   A0A3P9DMN4   A0A3Q2XY05   A0A3Q4HB72   A0A2J7PJI9   I3KLI6   A0A2U9C020   A0A182U5N0   A0A3B4EV55   A0A3Q2V0N3   A0A1I8PD71   A0A3P8X156   A0A3B4EGC8   A0A2D0SHV0   A0A146NSK1   A0A3M6UBR5   A0A3Q2YWM4  

KEGG

101744103    no KO assigned | (RefSeq) uncharacterized protein C20orf24 homolog

GO

GO:0016021  

PANTHER

PTHR12906  

Length:

127

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

55.3609

Exp number, first 60 AAs:

15.55467

Total prob of N-in:

0.73511

POSSIBLE N-term signal

sequence

inside

1  -  40

TMhelix

41  -  59

outside

60  -  62

TMhelix

63  -  82

inside

83  -  102

TMhelix

103  -  122

outside

123  -  127

 

 

Pi

17.255011

Theta

24.518175

Tajima's D

-0.793826

CLR

0

CSRT

0.175541222938853

Interpretation

Uncertain