SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06778  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012119
Annotation
PREDICTED:_integrin-linked_protein_kinase_[Amyelois_transitella]
Location in the cell
Mitochondrial   Reliability : 2.462
 

Sequence

CDS
ATGTCGTGGGGCTCGCTGCACGCGCTGCTGCACGGCGGCGCGGGCGGGCGCGTGGTGGTGGACGCGGCGGCGGCGCTGCGGCTGGCGCACGACGTGGCGCGCGGCATGCGCTACCTGCACTCGCTGCAGCGGGACACCATCCTGCCCGCCTACCATCTCAACAGCAAACACATCATGATCGACGAAGACCTGACGGCCCGCATCAACATGGCGGACGCGAAGTTTTCGTTCCAAGAGCGCGGGCGGGTGTACGCGCCGGCGTGGATGGCCCCCGAGGCTCTGCTCAAGCCGGCCGCCAAGCGGAACTGGGAGGCCGCAGACATGTGGAGCTTCGCCGTGCTGTTGTGGGAGCTGGCCACCAGAGAGATACCATTCGCGGATCTGTCACCAATGGAGTGCGGCATGAAGATAGCGCTTGAAGGTCTTCGTATAAGCATACCTCCGGGCGTGTCGCCTCACATCTCGAAACTCATCAAGATCTGCATGAACGAGGATCCCGGGAAACGACCATCTTTCGAAATGATCCTACCGATTTTAGAGAAGATGAAACGCTGA
Protein
MSWGSLHALLHGGAGGRVVVDAAAALRLAHDVARGMRYLHSLQRDTILPAYHLNSKHIMIDEDLTARINMADAKFSFQERGRVYAPAWMAPEALLKPAAKRNWEAADMWSFAVLLWELATREIPFADLSPMECGMKIALEGLRISIPPGVSPHISKLIKICMNEDPGKRPSFEMILPILEKMKR

Summary

EMBL
BABH01016368    KQ459252    KPJ02131.1    NWSH01003235    PCG66709.1    ODYU01001443    + More
SOQ37650.1    DQ307189    ABC25089.1    KK853074    KDR11771.1    PYGN01000327    PSN48447.1    NEVH01012562    PNF30233.1    KA646166    AFP60795.1    AJVK01058967    ATLV01024501    KE525352    KFB51499.1    GAPW01002178    JAC11420.1    LJIG01001233    KRT85707.1    AXCN02000480    JRES01000036    KNC34690.1    EZ422744    ADD19020.1    GECL01002604    JAP03520.1    GDAI01002943    JAI14660.1    APCN01002307    AAAB01008960    EAA11332.2    AJWK01012393    UFQT01004167    SSX35547.1    CP012525    ALC44185.1    CH477191    EAT48622.1    JXUM01095997    JXUM01097423    KQ564341    KQ564236    KXJ72404.1    KXJ72544.1    CH379069    EAL29808.1    CH479212    EDW33201.1    OUUW01000009    SPP85340.1    GBGD01001449    JAC87440.1    GFTR01006313    JAW10113.1    GFDF01006485    JAV07599.1    GFDF01006484    JAV07600.1    GDKW01000975    JAI55620.1    ACPB03023230    KQ971331    EEZ99715.1    GAMC01009852    GAMC01009851    JAB96703.1    AXCM01005052    CH902618    EDV39763.1    ADMH02002078    ETN59472.1    GBBI01002227    JAC16485.1    GBHO01003613    GBRD01008500    GDHC01001625    JAG39991.1    JAG57321.1    JAQ17004.1    GGFK01009067    MBW42388.1    CH480826    EDW44326.1    CH954178    EDV52618.1    CM000363    CM002912    EDX11347.1    KMZ00952.1    CM000159    CH891699    EDW95073.1    EDW99692.1    GGFK01009078    MBW42399.1    GFDL01011602    JAV23443.1    GEDC01015660    GEDC01001521    JAS21638.1    JAS35777.1    UFQS01002629    UFQT01002629    SSX14396.1    SSX33806.1    EZ114881    ACU30934.1    DS232603    EDS43960.1    GEZM01091389    JAV56863.1    JTDY01000629    KOB76415.1    AE014296    AY051708    AJ249345    AAF51691.1    AAK93132.1    CAB77053.1    DS235873    EEB19641.1    GBXI01008852    JAD05440.1    CH940647    EDW70620.1    CCAG010001557    JXJN01008636    MWRG01022752    PRD22154.1    GANO01001419    JAB58452.1    GAPW01001371    JAC12227.1    MWRG01054555    PRD19721.1    CH933809    EDW18245.1    KQ434938    KZC12052.1    GDHF01000410    JAI51904.1    ADTU01010884    CH916366    CH916456    EDV96888.1    EDV98665.1    KQ980151    KYN17501.1    KQ981953    KYN32360.1    CH963847    EDW73112.1    GAKP01012773    JAC46179.1    KQ435828    KOX71849.1    KQ414627    KOC67432.1    GL888158    EGI66397.1    GL435204    EFN73809.1    GEBQ01012723    JAT27254.1    LBMM01004087    KMQ92821.1    KK107494    EZA49838.1    GL449100    EFN83251.1    KQ976760    KYN08530.1   
Pfam
PF00023   Ank        + More
PF07714   Pkinase_Tyr
PF12796   Ank_2
Interpro
IPR000719   Prot_kinase_dom        + More
IPR036770   Ankyrin_rpt-contain_sf       
IPR020683   Ankyrin_rpt-contain_dom       
IPR002110   Ankyrin_rpt       
IPR011009   Kinase-like_dom_sf       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       
IPR035692   PK_ILK       
SUPFAM
SSF48403   SSF48403        + More
SSF56112   SSF56112       
Gene 3D
PDB
3REP     E-value=7.95642e-56,     Score=545

Ontologies

Topology

Length:
184
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.17419
Exp number, first 60 AAs:
0.17193
Total prob of N-in:
0.03154
outside
1  -  184
 
 

Population Genetic Test Statistics

Pi
17.12464
Theta
18.055375
Tajima's D
-0.482173
CLR
0.423027
CSRT
0.24238788060597
Interpretation
Uncertain
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