SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06773
Pre Gene Modal
BGIBMGA012121
Annotation
PREDICTED:_glucose-fructose_oxidoreductase_domain-containing_protein_1_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 2.91
 

Sequence

CDS
ATGTTACCGGGTATTGGGGTTTTTGGAACAGGAGCGATTGCTAAAGTTCTGGTGCCTTTCTTGAAAGAGAAAGGATTTTCTGTTGAAGCAATATGGGGTATAACTTTGCAAGAAGCAGAGATAGCCGCAAAAGAACTTAAAATTCCTTTCTTCACAAACAAAATTGACGACGTCCTTCTCAAGAAGAATGTGAGTTTAGTTTTCATAGTTTGTGCCCCAAATCTTCATGCTCAGATATCTGTCAAAGCACTTGGTATAGGAAAACATGTTGTTTGTGATAAACCAGCGGGACTGTGCCAAGCTGAAGCATTGAAGATGGTTCGTGCAGCACAGTATTATCCAACGCTCATTTCTATTGTTAATCATTCACTGAGATTTTTACCAGCATTCACTCATATGAGAAAGTGTATTCAAGAGGGATATCTTGGAGACCCTGAAGAATTAACACTTATAGATGTAAGAGTACAAATGGGACCTTTAATAGGAGACTCTTATAACTGGTTATGTGATGATACAATGGGTGGCGGTACCTTAACTTTAGTGGGAAGCCATGTTATAGATTTGGTATCATTTCTTACTAAACAGAAAGTAGTAAAAGTACATGGTGTATTGAGGACTTTTGTTGAAGAGACTTCAAAAATAAATGGTATAAGGAAGATCACAGCTCCAGATTTTTGTACATTCCAATTACAAATGGACAAAGGCTTGTTAGTGACTGCGACACTGAATAATCATTTACCAGGACCATGTTTTAATCAAGAGATTTATGTTTGTAGCAAAAAGGGATATTTAGTGGTGAGAGGTGGAGATCTCCATGGAAAACTGCATAAAACCTACTCTAATAAACATTTTCCAGATGAGGAAACTAAGAGGCACGACAAAGAAGATGTTATATATGTAGATATAGAAGATTTAAGCTGTGCCTCAAGTGTGGTTCCTAAGCCTTATATTAAAGGTCTTTGTAAAATGATAAGTGCTCTCAAAGAGGCATTTTTGCCCGTCAAAGAAGAAATGGACTGGATAAAAGAACCTGTTAAAGCGGCAGCAACTTTTGAAGATGGACAAAGAGTCCAAGCAACTATGGAGGCTTTGCGACAATCAAATGAAGATGGCTGTTGGACATCTGTTAAATTATTGACTGAGCCACCTGATCCAAATCCAGCTCTATCTGCAGCAGTACGACGTACGGCCATATCATTACAATAG
Protein
MLPGIGVFGTGAIAKVLVPFLKEKGFSVEAIWGITLQEAEIAAKELKIPFFTNKIDDVLLKKNVSLVFIVCAPNLHAQISVKALGIGKHVVCDKPAGLCQAEALKMVRAAQYYPTLISIVNHSLRFLPAFTHMRKCIQEGYLGDPEELTLIDVRVQMGPLIGDSYNWLCDDTMGGGTLTLVGSHVIDLVSFLTKQKVVKVHGVLRTFVEETSKINGIRKITAPDFCTFQLQMDKGLLVTATLNNHLPGPCFNQEIYVCSKKGYLVVRGGDLHGKLHKTYSNKHFPDEETKRHDKEDVIYVDIEDLSCASSVVPKPYIKGLCKMISALKEAFLPVKEEMDWIKEPVKAAATFEDGQRVQATMEALRQSNEDGCWTSVKLLTEPPDPNPALSAAVRRTAISLQ

Summary

EMBL
BABH01016379    ODYU01006740    SOQ48861.1    NWSH01003029    PCG67084.1    RSAL01000007    + More
RVE54111.1    KQ459606    KPI91735.1    KQ460779    KPJ12317.1    AGBW02012418    OWR45086.1    JTDY01001966    KOB72435.1    KK855305    PTY21931.1    PYGN01000773    PSN40979.1    GBBI01002460    JAC16252.1    GECL01000538    JAP05586.1    NEVH01016949    PNF24977.1    ACPB03004522    GEDC01028485    JAS08813.1    GEBQ01019417    JAT20560.1    GECZ01015784    JAS53985.1    JH431850    NNAY01000418    OXU28547.1    KQ971321    EEZ99535.1    AAZX01008304    APGK01043139    KB741011    KB631957    ENN75577.1    ERL87472.1    GEZM01068161    JAV67126.1    BT128035    AEE62996.1    GBYB01013576    GBYB01013577    JAG83343.1    JAG83344.1    JXUM01091176    KQ563894    KXJ73100.1    KQ977873    KYM99127.1    JXUM01112280    KQ565578    KXJ70862.1    GL888912    EGI57388.1    KQ979962    KYN18438.1    KQ981727    KYN37097.1    GDHC01017184    JAQ01445.1    KQ983211    KYQ46643.1    LBMM01001179    KMQ96770.1    GL764132    EFZ18253.1    GL439266    EFN67567.1    GFDL01000853    JAV34192.1    KQ976396    KYM92856.1    ADTU01011781    GGMS01002466    MBY71669.1    GL446605    EFN87553.1    KK107167    QOIP01000010    EZA56332.1    RLU17802.1    ABLF02019997    AK343031    BAH72825.1    GFDF01010497    JAV03587.1    KQ435955    KOX68031.1    GFXV01004509    MBW16314.1    KQ434908    KZC11315.1    CH477367    EAT42513.1    KZ288263    PBC30314.1    AJWK01016683    AJWK01016684    JRES01001657    KNC21093.1    UFQS01001138    UFQT01001138    SSX09199.1    SSX29108.1    ADMH02001549    ETN62097.1    CCAG010016470    EZ423176    ADD19452.1    GBXI01002097    JAD12195.1    CH933807    EDW11674.1    GDHF01022262    JAI30052.1    GAKP01006490    GAKP01006489    JAC52463.1    CH940649    EDW64392.1    GAMC01007981    JAB98574.1    CH902620    EDV32528.1    KPU74014.1    CH954177    EDV57376.1    CH379060    EAL33996.1    CH479180    EDW29341.1    FJ821029    ACN94681.1    OUUW01000004    SPP79356.1    CM000157    EDW87281.1    CH964274    EDW85317.1    CM000361    CM002910    EDX03367.1    KMY87517.1    AF145615    AE014134    AAD38590.1    AAF51339.1    CH480829    EDW45545.1    GGFJ01005955    MBW55096.1    CP012523    ALC40032.1    GFTR01005096    JAW11330.1    CH916379    EDV94195.1    AAAB01008964    APCN01002473    AXCM01005371    ATLV01023768    KE525346    KFB49474.1    AXCP01008863    EAA12364.4   
Pfam
PF01408   GFO_IDH_MocA        + More
PF02894   GFO_IDH_MocA_C
Interpro
IPR000683   Oxidoreductase_N        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR004104   OxRdtase_C       
SUPFAM
SSF51735   SSF51735       
PDB
3CEA     E-value=5.14695e-10,     Score=154

Ontologies

Topology

Length:
401
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.17021
Exp number, first 60 AAs:
0.13301
Total prob of N-in:
0.00698
outside
1  -  401
 
 

Population Genetic Test Statistics

Pi
343.110973
Theta
240.560562
Tajima's D
1.333022
CLR
0
CSRT
0.743212839358032
Interpretation
Uncertain
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