Gene

KWMTBOMO06769  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012123

Annotation

Pyridoxal-5'-phosphate-dependent_protein_beta_subunit_[Operophtera_brumata]

Location

Bomo_Chr11(-):14629124-14630341      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.958

CDS

ATGGCAAACAATAATAGCGTTGACAACGAAATCAAGGCATCAGCCTTGGATCTCATCGGCAATACGCCTATAGTAGCGCTCGATCGCCTTCACCCTGGCCCCGGAAGGATCTTGGCGAAATGTGAGTTCATGAACCCGGGAGCATCTATTAAGTGCCGGTCATCACTTTGCATGATCAAGAAAGCGTTGGCCTCTGGTGAACTGAAACCTAAAGAGCCAGTTGTGGAAGTGACATCGGGAAATCAAGGATGTGGGCTCGCCGTCGTGTGTGCTGTATTGGGTCATCCGCTAACGCTTGCCATGTCAAAAGGAAACAGTGCTCAAAGGGCCATACATATGGAGGCTCTCGGGGCCAAATGCGTAAGAGTTCCGCAAGTGGAAGGCACGTACGGAAACGTGACTTTGAACGATGTAAAAGCAGTGGAGGAAGTAGGCCTAAGAATTGTAAAGGAAACCGGCGCATATTATGTGAATCAGTTCAACAACGACGCCAACTCCGAGTCTCACTACCAAACCACAGGACCTGAGATATGGAGACAGACTGGACATCGTGTTGACGCATTTGTTGCTACTGTCGGTACCGCGGGCACTTTTACTGGAACTACAAGGTATTTAAAGGAAAAGAATCCAGATTTGAAGGCGTACGTTGTTGAACCTGAAGGCGCTCAACCAATAAGAGGACTGCCAGTCATAAAGCCCCTTCATCTCCTACAAGGGTCAGGTTACGGTTGCGTTCCGAATTTATTCAAACGTGAGTACATGGATGGCACCCTGAGCGTATCTGATGAGGAAGCGATGGAGTATAAAAAGCTGATTGGCGAGAAAGAAGGTTTATATGTGGGCTACACAAGTGCTGCTAATGTAGCAGCGGCCGTCAAGTTGCTGAAGTCTGGACAGTTGCCTGAGGATTCGTGGGTAGTCACCATGCTCAATGACACCGGCTTGAAATATACTCCAGTGCCTGAAGAGTTTACGTAA

Protein

MANNNSVDNEIKASALDLIGNTPIVALDRLHPGPGRILAKCEFMNPGASIKCRSSLCMIKKALASGELKPKEPVVEVTSGNQGCGLAVVCAVLGHPLTLAMSKGNSAQRAIHMEALGAKCVRVPQVEGTYGNVTLNDVKAVEEVGLRIVKETGAYYVNQFNNDANSESHYQTTGPEIWRQTGHRVDAFVATVGTAGTFTGTTRYLKEKNPDLKAYVVEPEGAQPIRGLPVIKPLHLLQGSGYGCVPNLFKREYMDGTLSVSDEEAMEYKKLIGEKEGLYVGYTSAANVAAAVKLLKSGQLPEDSWVVTMLNDTGLKYTPVPEEFT

Uniprot

H9JRG3   A0A0L7LB36   A0A0U3S5Y4   A0A220K8H3   A0A220K819   A0A194PFD1   + More
A0A2H1VR62   A0A194R8W1   A0A2A4J5Y7   A0A220K8C9   A0A220K835   A0A220K8J3   A0A2A4J4L8   A0A220K8A8   A0A220K813   A0A2H1W7D9   A0A220K8E3   A0A220K8D1   A0A220K8F1   A0A0U3QZ45   A0A220K8B9   I4DLE5   A0A212EQW4   A0A220K8D8   A0A220K824   A0A1D2MWT8   A0A0U3SCD8   A0A212FH38   A0A220K8D2   T1KF23   A0A023ZRZ4   A0A226DGG8   A0A3S3NRW7   A0A0L6J4R0   A0A1I3RB50   A0A1I4IDD8   I9WTW2   A0A0V7Z7W8   A0A0S8G065   A0A3G2V492   A0A1I7FYA1   A0A0E9KEZ5   B1M078   A0A2M8VFB9   A0A1I6PQ87   A0A2U8X9Z7   A0A2U1E2Q1   A0A1F9AHE9   A0A2A4B330   A0A0J6T7G5   A3JXC5   A0A354Y7X9   A0A225MD82   W1KQD9   A0A2M8QIC4   A0A239IFX7   T0GU46   A0A2T4HNU1   A0A1T5ESV9   A0A126RG36   T0I0H1   A0A1T5GLM8   A0A031IXS0   A0A126RF03   A0A081SXB7   A0A1E1F8E0   A0A2K8WBZ3   A0A0M7MJC7   A0A1R1K2W7   A0A2I8DC77   A0A1I6VCR4   A0A365XMT5   A0A0M7MMQ9   A0A0D6IXP8   A0A2M9GRQ0   A0A1D8IJF5   A0A0X8P154   A0A0M7K288   A0A0M7HQQ6   A0A179T477   A1HQX6   F6DQI8   F7SZI9   A0A0B5DW83   A0A1S6IVG3   A0A1M6TM50   A0A1F8QFU6   A0A1M4VVD8   A4J492   A0A1G0YYH4   K8DXV2   A0A2C6ME27   A0A3N5KT09   W7S7N8   A0A3P3G6S4   A0A2A3DNU8   A0A0A0DZP8   A0A2R6CDD4   A0A1F8RW04   A0A3S2YAM0  

Pubmed

19121390    26227816    26714205    28629163    26354079    22651552    + More
22118469    27289101    24843024    22933776    25922666    27774985    30148503    23990581    24051321    27056231    24051323    27056230    29437920    23408247    25256706    27153808    23405336    30086797   

EMBL

BABH01016384    JTDY01001966    KOB72436.1    KT358809    ALV66640.1    MF038029    + More
ASJ26366.1    MF038031    ASJ26368.1    KQ459606    KPI91728.1    ODYU01003915    SOQ43266.1    KQ460779    KPJ12311.1    NWSH01003029    PCG67088.1    MF038036    ASJ26373.1    MF038026    ASJ26363.1    MF038033    ASJ26370.1    PCG67087.1    MF038027    ASJ26364.1    MF038025    ASJ26362.1    ODYU01006740    SOQ48866.1    MF038030    ASJ26367.1    MF038035    ASJ26372.1    MF038032    ASJ26369.1    KT358810    ALV66641.1    MF038024    ASJ26361.1    AK402113    BAM18735.1    AGBW02013216    OWR43859.1    MF038037    ASJ26374.1    MF038028    ASJ26365.1    LJIJ01000447    ODM97401.1    KT358808    ALV66639.1    AGBW02008548    OWR53055.1    MF038034    ASJ26371.1    CAEY01000030    KF981737    AHY81321.1    KF981736    AHY81319.1    LNIX01000020    OXA43944.1    NCKU01003151    NCKU01002640    NCKU01001078    RWS08070.1    RWS09121.1    RWS13159.1    LHCD01000027    KNY20625.1    FOQW01000018    SFJ43022.1    FOTK01000006    SFL51776.1    AKFK01000065    EIZ83823.1    LKKO01000019    KST60671.1    LJTP01000049    KPK65356.1    CP033231    AYO82577.1    FPCB01000005    SFU41101.1    BBUX01000052    GAN50939.1    CP001001    ACB25989.1    PEKQ01000092    PJI55431.1    FOZY01000002    SFS42367.1    CP029552    AWN54528.1    QEKZ01000031    PVY93979.1    MGQK01000094    OGP57509.1    NWMW01000002    PCD02189.1    LABX01000002    KMO41904.1    AAYA01000001    EBA10161.1    DNXT01000114    HBK45463.1    NJIH01000007    OWT59206.1    AUDA01000125    EPR15520.1    NETV01000003    PJG45351.1    FZOS01000023    SNS91314.1    ATDO01000050    EQB07481.1    PHHF01000073    PTD17464.1    FUYP01000024    SKB87024.1    CP005083    AMK21220.1    ATDP01000042    EQB18807.1    FUYM01000016    SKC09302.1    JFYY01000050    EZP66023.1    CP005191    AMK20679.1    JANF02000093    KER34691.1    AP017657    BAV66794.1    CP021913    AUC53845.1    CYSX01000013    CUJ78136.1    MJMN01000001    OMG93787.1    CP026124    AUT44835.1    FOZW01000010    SFT11459.1    QLNH01000445    RBL87084.1    CYTT01000021    CUJ79377.1    LN831029    CKI26839.1    PHIH01000025    PJM67232.1    CP017433    AOU96612.1    CP014060    AMG37948.1    CYUB01000030    CUK20320.1    CYTP01000003    CUJ12069.1    LWPK01000139    OAS88966.1    AAWL01000009    EAX47485.1    CP002780    AEG60882.1    AFRQ01000039    EGP46495.1    CP004393    AJE47628.1    CP019698    AQS58765.1    FRAR01000017    SHK58037.1    MGNS01000162    OGO33981.1    FQUY01000005    SHE72880.1    CP000612    ABO49895.1    MHBF01000088    OGV50990.1    CAOS01000003    CCO07430.1    AWQQ01000017    PHJ39559.1    RPQU01000440    RPI07673.1    KK037166    EWM10805.1    RQXT01000003    RRI06437.1    NSGG01000013    PBC07768.1    JRAS01000029    KGM44241.1    NEXF01000039    PSO08907.1    MGOC01000174    OGO51848.1    SADM01000010    RVV42596.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000053240    UP000218220    UP000007151    + More
UP000094527    UP000015104    UP000198287    UP000285301    UP000036734    UP000199571    UP000199048    UP000004753    UP000053043    UP000278388    UP000199402    UP000032904    UP000006589    UP000198700    UP000246097    UP000246100    UP000218366    UP000035929    UP000005713    UP000214603    UP000019104    UP000229267    UP000198281    UP000015528    UP000241206    UP000190044    UP000060779    UP000015531    UP000189818    UP000023992    UP000060707    UP000028135    UP000218272    UP000232586    UP000041351    UP000187251    UP000236176    UP000199392    UP000043136    UP000059657    UP000229198    UP000192456    UP000060602    UP000039708    UP000040179    UP000078502    UP000005139    UP000009234    UP000004853    UP000031521    UP000189464    UP000183997    UP000179273    UP000184148    UP000001556    UP000176916    UP000009315    UP000030658    UP000273786    UP000217825    UP000242015    UP000288475   

PRIDE

H9JRG3   

Pfam

PF00291   PALP

Interpro

IPR001216   P-phosphate_BS        + More
IPR001926   PLP-dep       
IPR036052   Trypto_synt_PLP_dependent       

SUPFAM

SSF53686   SSF53686       

ProteinModelPortal

H9JRG3   A0A0L7LB36   A0A0U3S5Y4   A0A220K8H3   A0A220K819   A0A194PFD1   + More
A0A2H1VR62   A0A194R8W1   A0A2A4J5Y7   A0A220K8C9   A0A220K835   A0A220K8J3   A0A2A4J4L8   A0A220K8A8   A0A220K813   A0A2H1W7D9   A0A220K8E3   A0A220K8D1   A0A220K8F1   A0A0U3QZ45   A0A220K8B9   I4DLE5   A0A212EQW4   A0A220K8D8   A0A220K824   A0A1D2MWT8   A0A0U3SCD8   A0A212FH38   A0A220K8D2   T1KF23   A0A023ZRZ4   A0A226DGG8   A0A3S3NRW7   A0A0L6J4R0   A0A1I3RB50   A0A1I4IDD8   I9WTW2   A0A0V7Z7W8   A0A0S8G065   A0A3G2V492   A0A1I7FYA1   A0A0E9KEZ5   B1M078   A0A2M8VFB9   A0A1I6PQ87   A0A2U8X9Z7   A0A2U1E2Q1   A0A1F9AHE9   A0A2A4B330   A0A0J6T7G5   A3JXC5   A0A354Y7X9   A0A225MD82   W1KQD9   A0A2M8QIC4   A0A239IFX7   T0GU46   A0A2T4HNU1   A0A1T5ESV9   A0A126RG36   T0I0H1   A0A1T5GLM8   A0A031IXS0   A0A126RF03   A0A081SXB7   A0A1E1F8E0   A0A2K8WBZ3   A0A0M7MJC7   A0A1R1K2W7   A0A2I8DC77   A0A1I6VCR4   A0A365XMT5   A0A0M7MMQ9   A0A0D6IXP8   A0A2M9GRQ0   A0A1D8IJF5   A0A0X8P154   A0A0M7K288   A0A0M7HQQ6   A0A179T477   A1HQX6   F6DQI8   F7SZI9   A0A0B5DW83   A0A1S6IVG3   A0A1M6TM50   A0A1F8QFU6   A0A1M4VVD8   A4J492   A0A1G0YYH4   K8DXV2   A0A2C6ME27   A0A3N5KT09   W7S7N8   A0A3P3G6S4   A0A2A3DNU8   A0A0A0DZP8   A0A2R6CDD4   A0A1F8RW04   A0A3S2YAM0  

PDB

5XOQ     E-value=2.60773e-39,     Score=406

KEGG

101745635    K01738 cysteine synthase [EC:2.5.1.47] | (RefSeq) putative inactive cysteine synthase 2

PATHWAY

00270    Cysteine and methionine metabolism - Bombyx mori (domestic silkworm)
00920    Sulfur metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01200    Carbon metabolism - Bombyx mori (domestic silkworm)
01230    Biosynthesis of amino acids - Bombyx mori (domestic silkworm)

GO

GO:0006535   GO:0050017   GO:0004124   GO:0003676   GO:0005634   GO:0005515   GO:0006355   GO:0043565   GO:0016567   GO:0016020   GO:0006260  

Length:

325

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.2813

Exp number, first 60 AAs:

0.01095

Total prob of N-in:

0.06439

outside

1  -  325

 

 

Pi

271.429166

Theta

200.120204

Tajima's D

1.121612

CLR

0.02281

CSRT

0.692565371731413

Interpretation

Uncertain