SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06765
Annotation
PREDICTED:_inner_centromere_protein_A_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.567
 

Sequence

CDS
ATGTCACATCTTTACCTGCCCTGGGGCTCAGGTGAAAGATATACGAATCGATTGCAAGTCCGTAATCAATTCGCAAGCACATTAGAATTACACAAACAATCTTCATACGAATATCCTGAACCAGTTCAACGACAAAGAAGTCCAAGTCTACCTCCAATACATCACATCGACGATGAGAAAAAATTGAAAGATGAAAAAAAAATAAACATTCTTAATCGCAACATTCCGAGTGCTAAGAGATTTTCGTTTTATGACGAAGATGGCGAAGGAGATACTTCAGGATATGGGAGCGAAACTATAAACCACATGAATAGGAATAATAACGATGCGGTACATGATATAAACCGAAATCCTGTTGTAGCCTGGCAACAAACGACTAACGACGACAGGAAGAAAACATCAAATACCGGACCAGGTACAAATGAGACACCGTGGTCAGCTCGTAGTCCGAGGACTGCAGAAGAAGGCCGTCTGCGATGGGGAGACCGCGGTGTCGCCACAGGACGACTTTGGGAACCAACTGCACCAAACGCTCGGTTACCACAAATGCCCAATCAAAAGAAAGGAACTCCATCATGGGTCGAACGAGGTTTGAACATGATTGAAAATTCGTCTGAAGTACTTATTATAGATCAAAGAAGTTCAAGTAATAGCACAGGACTTGACTGTGATAGATCATCATGTCATGGCAGCGATGAGGGAAGAACTTTTTTGAGAGGACAAAACGTTCCTTTAGAACCTGAAGTTAAAGCTCAGCGTGAAAGCAAACGCATCAAAGCTTTAGAACTACAAACAGCTATTTTGAACCAGTTAGAAGAAAGAGAAAAATGTCGCCAAGAAGAAAAAGAGAGGAAACTTAAAGAAGAAAAATTAGAGGAGTTGCGAATGCTCAGGCAGCAAGAACAAGATCGAAATAGACTAGAGGAAGAAAAAAGGAGACACGAAGAAAAACAATTAATGGAGCAAAAAAAGCTTGAAGCTTTAAAGAAAGCTCTCGATGACGCCGAAAAGAAGGCTAAGCAAGAAAAAGAAAAAAGGTTTACTAATATAAGGAAAATGTTTAGTATAAATGCCGATAGTGAAAAAAAAGATAACTGTATAGAGGCAACAACTGCTGAAACACCATCTCAATGTACAGCTGAGCCAATAAGCCCTTCTAGAACTAATAGAACATACGACGCGCAATCAACCAAAAGCCCAAAAAGAGATTGTGCTTCTCATCAAGCCTCGGGATTCAACTCTCCAAGGTCGGCTGCTCCAGGAAACTTCAACTTATTCATACATAATATGCCTCCTCCTCTAGCTTTATCCGAAAATCAATTCAATATAGTGCCGATAGCCATTAATAGCTGTTCGGACCTAATTGGAACACAAACAAATGGTATACAATTAGCTGTTTTAGTGCCACACAACTTAGCTCAAAATATTTACGGTATGCCAATAACAAATATAAATGATTTATCTGAGGCTCATAAAGTCTTAACACCAAATAAATATCGCTTAATCAAAAAAGATGCATGCACCCAAACCGAAGCGAGTGTATTTCGATGTACATCAGAGACGATGGTGACACTGGATGATCTTGAAAGAAATATAGATAAAGACTATGCTAACATTGACGAAAACGCACCACAAGACAGTCACCAAAGTACATTGAAAAAAGATCGAAGATTTCGTTCAGAAGAAAGATACAAAAAAGAATTAGATAGTCGCCCAAAGTGGGGCGTGAATAGGCCCGCGGCTCAGTACAAAAAACAAAGCGAAAAGGATCCATTTTACAGCCAAAAGAGAAAGGTTCGCCAGAAATACAGGCCTCAACTACGGCAATATTTATCACAATCCAGTGAAGATAGCCGTTCACCGAGTCCCCCAAACAGATCTGATAAAAACTTAATAAATAGTAACAAGCGATTCTCTTTAAGTCAATCATATTGGAGAAACAAGAGAACACAAGAATCAACAAAAAGCAACACGATGGAGTCAATGAGCAATTTGCAATTAGAATACAATCAAATAGATCAAATAACTGCAAATGAATTATCTGAGAGTAAAAAATCTCCTAAAATATCACCAACAAAAAGATTAACTTTATCACAAAAATTTATAAATGACAAGTATGGTAATAGAAAATTGTGGGTTGAGGATATTGACGATAGAAATGCGAAGTCTAACCTATTTAATACCGAAAACAGAAAAAGAATTATAGACCAAATAAATAATGCAAAACGACATTTCTTAGAAAGGAACGAAGAACAAGAAAACTATGTCGTAAATGCAAAATTTTAA
Protein
MSHLYLPWGSGERYTNRLQVRNQFASTLELHKQSSYEYPEPVQRQRSPSLPPIHHIDDEKKLKDEKKINILNRNIPSAKRFSFYDEDGEGDTSGYGSETINHMNRNNNDAVHDINRNPVVAWQQTTNDDRKKTSNTGPGTNETPWSARSPRTAEEGRLRWGDRGVATGRLWEPTAPNARLPQMPNQKKGTPSWVERGLNMIENSSEVLIIDQRSSSNSTGLDCDRSSCHGSDEGRTFLRGQNVPLEPEVKAQRESKRIKALELQTAILNQLEEREKCRQEEKERKLKEEKLEELRMLRQQEQDRNRLEEEKRRHEEKQLMEQKKLEALKKALDDAEKKAKQEKEKRFTNIRKMFSINADSEKKDNCIEATTAETPSQCTAEPISPSRTNRTYDAQSTKSPKRDCASHQASGFNSPRSAAPGNFNLFIHNMPPPLALSENQFNIVPIAINSCSDLIGTQTNGIQLAVLVPHNLAQNIYGMPITNINDLSEAHKVLTPNKYRLIKKDACTQTEASVFRCTSETMVTLDDLERNIDKDYANIDENAPQDSHQSTLKKDRRFRSEERYKKELDSRPKWGVNRPAAQYKKQSEKDPFYSQKRKVRQKYRPQLRQYLSQSSEDSRSPSPPNRSDKNLINSNKRFSLSQSYWRNKRTQESTKSNTMESMSNLQLEYNQIDQITANELSESKKSPKISPTKRLTLSQKFINDKYGNRKLWVEDIDDRNAKSNLFNTENRKRIIDQINNAKRHFLERNEEQENYVVNAKF

Summary

Pfam
PF15236   CCDC66
Interpro
IPR040467   CCDC66_dom        + More
IPR039183   CCD66       

Ontologies

Topology

Length:
761
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00002
outside
1  -  761
 
 

Population Genetic Test Statistics

Pi
146.451562
Theta
231.907351
Tajima's D
-1.061606
CLR
58.57427
CSRT
0.127693615319234
Interpretation
Uncertain
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