Gene

KWMTBOMO06761  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012029

Annotation

mitochondrial_thioredoxin_2_[Bombyx_mori]

Location

Bomo_Chr11(+):14395722-14397360      View in EpiBrowser

Full name

Thioredoxin      

Location in the cell

Mitochondrial   Reliability : 1.153

CDS

ATGCTTACCAAAAATATTACTAACTTATTCATTCGAAATTGTACATTAAAAAAAAATTATGGGTTTTTGAGAAATTTCTCTCTAACTGCGTCGAAAAACGACATTGTGAAAATCCAGAGTACTGATGACTTCAAAGAAAAAGTAATTAATAGTAAAGTTCCCGTCGTTGTCGATTTCTTTGCAACGTGGTGCAACCCATGTAGACTACTTACTCCTCGCCTTGAGTCTATAATAGCAGAAAGTAAAGGCAAGGTGGTTTTGGCAAAAGTAGACATTGATGAACAAACTGATTTAGCATTAGATTATGAAGTAAGCTCTGTACCAGTCTTAGTAGCGATAAAGAATGGGAAAGTACAAAACCGTTTAGTTGGACTGCAAGATACTGATAAACTACGCAAGTGGATTGAACAGTTTGCTTCTGAAGAAACTAAAGCAGAAATAAAAGCTTAA

Protein

MLTKNITNLFIRNCTLKKNYGFLRNFSLTASKNDIVKIQSTDDFKEKVINSKVPVVVDFFATWCNPCRLLTPRLESIIAESKGKVVLAKVDIDEQTDLALDYEVSSVPVLVAIKNGKVQNRLVGLQDTDKLRKWIEQFASEETKAEIKA

Similarity

Belongs to the thioredoxin family.

Uniprot

Q2F5J9   I4DKF5   A0A194R3C0   A0A0L7LDN2   A0A3S2M9J8   A0A2A4JKL4   + More
A0A0A0VA40   A0A212ELD1   A0A2H1WZ26   A0A2P8ZKG6   A0A224XNX0   A0A2J7RGR7   A0A023FAV9   A0A161N1J1   B0WA02   T1DH89   T1HM49   A0A0P4VHF6   A0A0A9ZB97   A0A182MSJ7   A0A182YMK2   A0A1Q3FJ16   A0A182WJS9   A0A084VC58   A0A2M4AA76   A0A2M4AMK8   A0A1A9Z673   A0A182UA47   A0A182PDN6   A0A182VF20   A0A182XLI1   Q7QJ17   A0A182I2P7   A0A182NJY5   A0A182K161   A0A2M4C2Y0   A0A182FGK8   A0A2M4C2X2   T1DNH7   A0A1B0AU90   A0A2M3ZI13   Q5MIS6   A0A182G788   A0A023EGR0   R4WPK4   A0A182QER1   Q16W35   A0A2M3Z9Q5   A0A2M3Z830   A0A182R3K2   A0A182J5U0   W5JKW7   A0A1J1ISX0   A0A2R7W9U2   A0A1A9VTX9   E0VVV8   E2BYJ1   A0A1I8NEF7   A0A026X324   B4N364   A0A1I8PYY6   A0A0L0BQY9   A0A1B0DBV4   A0A1W4W3Q4   B3M6P1   A0A1B0G8M7   A0A1B0DGC8   A0A336KEN9   A0A1L8EEM8   B4LBV9   A0A0K8TS39   B4J0H9   B4H5V2   A0A1L8EEY1   Q2LYS4   A0A1B6CNU0   A0A1B6H879   A0A1B6MJC6   A0A1S3CX50   A0A3B0KGR9   W8C243   A0A1L8E035  

Pubmed

19121390    22651552    26354079    26227816    25542738    22118469    + More
29403074    25474469    24330624    27129103    25401762    26823975    25244985    24438588    12364791    14747013    17210077    17244540    24945155    26483478    23691247    17510324    20920257    23761445    20566863    20798317    25315136    24508170    30249741    17994087    26108605    26369729    15632085    24495485   

EMBL

BABH01016398    DQ311424    ABD36368.1    AK401773    KQ459606    BAM18395.1    + More
KPI91717.1    KQ460779    KPJ12303.1    JTDY01001566    KOB73510.1    RSAL01000007    RVE54102.1    NWSH01001104    PCG72597.1    KM358527    KM358528    AIW61836.1    AGBW02014084    OWR42292.1    ODYU01012166    SOQ58335.1    PYGN01000029    PSN56985.1    GFTR01002261    JAW14165.1    NEVH01003752    PNF40029.1    GBBI01000237    JAC18475.1    GEMB01002198    JAS00982.1    DS231867    EDS40660.1    GALA01001381    JAA93471.1    ACPB03012524    GDKW01003513    JAI53082.1    GBHO01004524    GBRD01001457    GDHC01009880    JAG39080.1    JAG64364.1    JAQ08749.1    AXCM01002771    GFDL01007530    JAV27515.1    ATLV01010511    KE524585    KFB35552.1    GGFK01004340    MBW37661.1    GGFK01008693    MBW42014.1    AAAB01008807    EAA04498.2    APCN01000178    GGFJ01010521    MBW59662.1    GGFJ01010503    MBW59644.1    GAMD01002865    JAA98725.1    JXJN01003556    GGFM01007435    MBW28186.1    AY826134    GAPW01005587    AAV90706.1    JAC08011.1    JXUM01047031    KQ561501    KXJ78378.1    GAPW01005588    JAC08010.1    AK417591    BAN20806.1    AXCN02000540    CH477576    EAT38787.1    GGFM01004454    MBW25205.1    GGFM01003921    MBW24672.1    ADMH02001146    ETN63938.1    CVRI01000059    CRL03325.1    KK854505    PTY16427.1    DS235815    EEB17514.1    GL451480    EFN79238.1    KK107046    QOIP01000004    EZA61799.1    RLU23904.1    CH964062    EDW78803.1    JRES01001499    KNC22421.1    AJVK01030297    CH902618    EDV38691.1    CCAG010000290    AJVK01059527    UFQS01000211    UFQT01000211    SSX01363.1    SSX21743.1    GFDG01001651    JAV17148.1    CH940647    EDW69759.1    GDAI01000436    JAI17167.1    CH916366    EDV96815.1    CH479212    EDW33169.1    GFDG01001650    JAV17149.1    CH379069    EAL29786.2    GEDC01022245    JAS15053.1    GECU01036789    JAS70917.1    GEBQ01030180    GEBQ01003966    JAT09797.1    JAT36011.1    OUUW01000012    SPP87620.1    GAMC01000653    JAC05903.1    GFDF01001964    JAV12120.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000037510    UP000283053    UP000218220    + More
UP000007151    UP000245037    UP000235965    UP000002320    UP000015103    UP000075883    UP000076408    UP000075920    UP000030765    UP000092445    UP000075902    UP000075885    UP000075903    UP000076407    UP000007062    UP000075840    UP000075884    UP000075881    UP000069272    UP000092460    UP000069940    UP000249989    UP000075886    UP000008820    UP000075900    UP000075880    UP000000673    UP000183832    UP000078200    UP000009046    UP000008237    UP000095301    UP000053097    UP000279307    UP000007798    UP000095300    UP000037069    UP000092462    UP000192221    UP000007801    UP000092444    UP000008792    UP000001070    UP000008744    UP000001819    UP000079169    UP000268350   

PRIDE

Q2F5J9   

Pfam

PF00085   Thioredoxin        + More
PF10180   DUF2373
PF00378   ECH_1
PF02847   MA3

Interpro

IPR013766   Thioredoxin_domain        + More
IPR005746   Thioredoxin       
IPR036249   Thioredoxin-like_sf       
IPR017937   Thioredoxin_CS       
IPR019327   DUF2373       
IPR016024   ARM-type_fold       
IPR001753   Enoyl-CoA_hydra/iso       
IPR029045   ClpP/crotonase-like_dom_sf       
IPR003891   Initiation_fac_eIF4g_MI       
IPR003890   MIF4G-like_typ-3       
IPR016021   MIF4-like_sf       

SUPFAM

SSF52833   SSF52833        + More
SSF52096   SSF52096       
SSF48371   SSF48371       

Gene 3D

1.25.40.180    

ProteinModelPortal

Q2F5J9   I4DKF5   A0A194R3C0   A0A0L7LDN2   A0A3S2M9J8   A0A2A4JKL4   + More
A0A0A0VA40   A0A212ELD1   A0A2H1WZ26   A0A2P8ZKG6   A0A224XNX0   A0A2J7RGR7   A0A023FAV9   A0A161N1J1   B0WA02   T1DH89   T1HM49   A0A0P4VHF6   A0A0A9ZB97   A0A182MSJ7   A0A182YMK2   A0A1Q3FJ16   A0A182WJS9   A0A084VC58   A0A2M4AA76   A0A2M4AMK8   A0A1A9Z673   A0A182UA47   A0A182PDN6   A0A182VF20   A0A182XLI1   Q7QJ17   A0A182I2P7   A0A182NJY5   A0A182K161   A0A2M4C2Y0   A0A182FGK8   A0A2M4C2X2   T1DNH7   A0A1B0AU90   A0A2M3ZI13   Q5MIS6   A0A182G788   A0A023EGR0   R4WPK4   A0A182QER1   Q16W35   A0A2M3Z9Q5   A0A2M3Z830   A0A182R3K2   A0A182J5U0   W5JKW7   A0A1J1ISX0   A0A2R7W9U2   A0A1A9VTX9   E0VVV8   E2BYJ1   A0A1I8NEF7   A0A026X324   B4N364   A0A1I8PYY6   A0A0L0BQY9   A0A1B0DBV4   A0A1W4W3Q4   B3M6P1   A0A1B0G8M7   A0A1B0DGC8   A0A336KEN9   A0A1L8EEM8   B4LBV9   A0A0K8TS39   B4J0H9   B4H5V2   A0A1L8EEY1   Q2LYS4   A0A1B6CNU0   A0A1B6H879   A0A1B6MJC6   A0A1S3CX50   A0A3B0KGR9   W8C243   A0A1L8E035  

PDB

1W89     E-value=1.1679e-29,     Score=317

KEGG

692981    K03671 thioredoxin 1 | (RefSeq) mitochondrial thioredoxin 2

GO

GO:0006662   GO:0005623   GO:0015035   GO:0045454   GO:0016021   GO:0003723   GO:0005515   GO:0006355   GO:0043565   GO:0016567   GO:0016020   GO:0005634   GO:0006260  

Length:

149

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00246

Exp number, first 60 AAs:

0.00153

Total prob of N-in:

0.14911

outside

1  -  149

 

 

Pi

220.639584

Theta

195.639173

Tajima's D

0.438454

CLR

56.658091

CSRT

0.500674966251687

Interpretation

Uncertain