Gene

KWMTBOMO06744

Pre Gene Modal

BGIBMGA012132

Annotation

PREDICTED:_sodium-coupled_monocarboxylate_transporter_2-like_[Papilio_polytes]

Location

Bomo_Chr11(-):13667986-13671321      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.955

CDS

ATGAGATTAGGTGATGTCTCCAAGCGGGCGGTGTTGTGTCACATAACCAGCATCACTTTGCTCGGTGTGCCAGTCGAGATATATCTAAGAGGAACGCAATATTGGGCGTCTGCTCTGTCTCTGATCATTGTAACATTTCTCACAGCCGTTATTTATTTACCAGTGTTCCACAAACTGCAACTGTCGTCGAGCTTCGAGTATTTAGAGATAAGATTTTCGACACACACCAGAACGATTGCTGCCGTGATGTTCATCATCAGCAAATTGATGTTGCTGCCTATTGTTCCTTACGTGCCTCTCACAGCCTTCAGACTCGTAACAGATCAATTAGCCGAACGCATTACGGCTGTAGTATGCGTGTCTTGTGCTACTTTAATAGCTGTCGGTGGACTACAGGCTATAGTTACGCTCGGCATGGTCACAGTATTCCTGGCAATAGCCGGTACTGGCTTGCCGAGTGGATTAGCTCTTTTGCCAATGGGCTTGGCGAAGATGTGGGAACTTAATAGTCTCGGCGGGAGATTGGTTTTGTACGATCCCGATCCCGAATTGGAGCACCACACGTCCTTCTTTGCAGTCACATTAGCATTAAGTACCAATTGGCTGTGGAAAATGGCCTTGAGTCAGGGAACTCTCCAGAAGCTCCAAGCAGTATCGACGATAAATAAAGCAAGAGTATGTTTGATCATTGCATGCGTTGGAGTGATCTTAATGAAATTGCTTTCTTGTACACTCGGCTTGGCGCTGTACGCCTGGTTTGTCGGCTGCGATCCATTGCTCGCTGGAAAAATTAAGAAACATGAACAGGTAATGATGTTAAGTTAA

Protein

MRLGDVSKRAVLCHITSITLLGVPVEIYLRGTQYWASALSLIIVTFLTAVIYLPVFHKLQLSSSFEYLEIRFSTHTRTIAAVMFIISKLMLLPIVPYVPLTAFRLVTDQLAERITAVVCVSCATLIAVGGLQAIVTLGMVTVFLAIAGTGLPSGLALLPMGLAKMWELNSLGGRLVLYDPDPELEHHTSFFAVTLALSTNWLWKMALSQGTLQKLQAVSTINKARVCLIIACVGVILMKLLSCTLGLALYAWFVGCDPLLAGKIKKHEQVMMLS

Similarity

Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.

Uniprot

A0A194PEC1   A0A0N1IGB4   A0A2H1WJN4   A0A212F725   A0A0L7L199   A0A1Q3FQF7   + More
B0W4K4   A0A026X377   E1ZVB7   A0A3L8DV00   A0A1B6I1F7   Q17K34   A0A1S4EZU6   A0A0J7KL16   A0A195C9N2   A0A067QTT6   E9IH55   A0A3S2LA31   A0A1B6EZ72   A0A151I4U6   A0A2J7QVC9   A0A182MC86   Q17K33   A0A0C9RWR2   A0A151JAS5   A0A195FKF8   A0A1B6F2A5   U5ESV6   A0A182K0S3   A0A067REM0   A0A1B6GEC2   D6WH77   A0A151WSC9   A0A139WI69   A0A1J1I490   A0A2P8ZE91   A0A182JI64   F4W533   A0A195CLV6   A0A195BP29   A0A158NDK2   F4WU94   A0A034VDC7   A0A034VEH2   A0A1B6HHC2   A0A1B6MFY6   A0A2H1VGG9   A0A195F3M3   A0A026W5H4   A0A182QV60   A0A1L8DER7   A0A212FHI2   A0A1J1ID30   A0A1B6CVL2   E2AQQ7   A0A170YED1   A0A0K8V9L1   A0A0K8VS11   W5JJX5   A0A1L8DES7   A0A194R0I5   A0A182F4T6   A0A1L8DES8   A0A232EG30   A0A154PA03   A0A195D9S5   A0A1B6D5M6   A0A084W5W1   A0A1L8DES4   A0A1B0CA85   A0A2J7PCD0   A0A1Y1L5S2   A0A2J7PCD1   E2AWG6   A0A0L7RCU1   A0A0K8URW5   A0A151XEF5   W8AJH7   W8ARK5   B4NAX6   A0A0A9WF43   A0A1B6EAY6   A0A182RDP6   A0A182NTY1   A0A182YR73   A0A182PLP8   A0A182NU01   T1IEF0   A0A182UC24   A0A232F205   W5JPR7   A0A3L8DFP4   A0A1B6HRF8   A0A1B6HG49   A0A026X262   A0A1B6JUL2   A0A1S4EZY9   Q17K36  

Pubmed

26354079    22118469    26227816    24508170    20798317    30249741    + More
17510324    24845553    21282665    18362917    19820115    29403074    21719571    21347285    25348373    20920257    23761445    28648823    24438588    28004739    24495485    17994087    25401762    25244985   

EMBL

KQ459606    KPI91701.1    KQ460499    KPJ14275.1    ODYU01009109    SOQ53295.1    + More
AGBW02009946    OWR49524.1    JTDY01003605    KOB69273.1    GFDL01005382    JAV29663.1    DS231838    EDS33849.1    KK107020    EZA62471.1    GL434491    EFN74893.1    QOIP01000004    RLU23719.1    GECU01026947    JAS80759.1    CH477228    EAT47058.1    LBMM01006054    KMQ90977.1    KQ978143    KYM96823.1    KK853282    KDR09026.1    GL763174    EFZ20108.1    RSAL01000346    RVE42323.1    GECZ01026618    JAS43151.1    KQ976445    KYM86132.1    NEVH01010477    PNF32536.1    AXCM01008724    EAT47059.1    GBYB01013490    JAG83257.1    KQ979275    KYN22033.1    KQ981522    KYN40747.1    GECZ01025434    JAS44335.1    GANO01003055    JAB56816.1    KK852746    KDR17314.1    GECZ01009116    JAS60653.1    KQ971330    EFA00982.1    KQ982775    KYQ50770.1    KQ971342    KYB27604.1    CVRI01000038    CRK94412.1    PYGN01000082    PSN54824.1    GL887596    EGI70729.1    KQ977600    KYN01452.1    KQ976424    KYM88272.1    ADTU01012644    GL888355    EGI62202.1    GAKP01018442    GAKP01018438    JAC40514.1    GAKP01018445    GAKP01018440    JAC40507.1    GECU01033701    JAS74005.1    GEBQ01005155    JAT34822.1    ODYU01002426    SOQ39896.1    KQ981820    KYN35180.1    KK107399    QOIP01000002    EZA51327.1    RLU25917.1    AXCN02000807    GFDF01009132    JAV04952.1    AGBW02008503    OWR53185.1    CVRI01000047    CRK98115.1    GEDC01019897    JAS17401.1    GL441804    EFN64246.1    GEMB01003380    JAR99834.1    GDHF01017084    GDHF01007157    JAI35230.1    JAI45157.1    GDHF01023020    GDHF01010647    JAI29294.1    JAI41667.1    ADMH02001219    ETN63613.1    GFDF01009121    JAV04963.1    KQ461108    KPJ09351.1    GFDF01009133    JAV04951.1    NNAY01004898    OXU17272.1    KQ434856    KZC08682.1    KQ981082    KYN09670.1    GEDC01016316    JAS20982.1    ATLV01020702    KE525305    KFB45605.1    GFDF01009122    JAV04962.1    AJWK01003402    NEVH01027063    PNF13986.1    GEZM01068536    JAV66906.1    PNF13988.1    GL443286    EFN62266.1    KQ414614    KOC68807.1    GDHF01023059    GDHF01022877    JAI29255.1    JAI29437.1    KQ982254    KYQ58745.1    GAMC01017855    JAB88700.1    GAMC01017858    GAMC01017854    JAB88697.1    CH964232    EDW80940.1    GBHO01037185    JAG06419.1    GEDC01002200    JAS35098.1    ACPB03014081    NNAY01001288    OXU24478.1    ADMH02000463    ETN66382.1    QOIP01000008    RLU19285.1    GECU01030439    JAS77267.1    GECU01034036    JAS73670.1    KK107031    EZA62128.1    GECU01004840    JAT02867.1    EAT47056.1   

Proteomes

UP000053268    UP000053240    UP000007151    UP000037510    UP000002320    UP000053097    + More
UP000000311    UP000279307    UP000008820    UP000036403    UP000078542    UP000027135    UP000283053    UP000078540    UP000235965    UP000075883    UP000078492    UP000078541    UP000075881    UP000007266    UP000075809    UP000183832    UP000245037    UP000075880    UP000007755    UP000005205    UP000075886    UP000000673    UP000069272    UP000215335    UP000076502    UP000030765    UP000092461    UP000053825    UP000007798    UP000075900    UP000075884    UP000076408    UP000075885    UP000015103    UP000075902   

Pfam

PF00474   SSF        + More
PF02803   Thiolase_C
PF00108   Thiolase_N
PF13855   LRR_8

Interpro

IPR038377   Na/Glc_symporter_sf        + More
IPR001734   Na/solute_symporter       
IPR016024   ARM-type_fold       
IPR020616   Thiolase_N       
IPR020615   Thiolase_acyl_enz_int_AS       
IPR016039   Thiolase-like       
IPR020617   Thiolase_C       
IPR018212   Na/solute_symporter_CS       
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR032675   LRR_dom_sf       
IPR007110   Ig-like_dom       
IPR023298   ATPase_P-typ_TM_dom_sf       

SUPFAM

SSF53901   SSF53901        + More
SSF48371   SSF48371       
SSF48726   SSF48726       
SSF81665   SSF81665       

Gene 3D

1.20.1730.10     3.40.47.10     3.80.10.10    

ProteinModelPortal

A0A194PEC1   A0A0N1IGB4   A0A2H1WJN4   A0A212F725   A0A0L7L199   A0A1Q3FQF7   + More
B0W4K4   A0A026X377   E1ZVB7   A0A3L8DV00   A0A1B6I1F7   Q17K34   A0A1S4EZU6   A0A0J7KL16   A0A195C9N2   A0A067QTT6   E9IH55   A0A3S2LA31   A0A1B6EZ72   A0A151I4U6   A0A2J7QVC9   A0A182MC86   Q17K33   A0A0C9RWR2   A0A151JAS5   A0A195FKF8   A0A1B6F2A5   U5ESV6   A0A182K0S3   A0A067REM0   A0A1B6GEC2   D6WH77   A0A151WSC9   A0A139WI69   A0A1J1I490   A0A2P8ZE91   A0A182JI64   F4W533   A0A195CLV6   A0A195BP29   A0A158NDK2   F4WU94   A0A034VDC7   A0A034VEH2   A0A1B6HHC2   A0A1B6MFY6   A0A2H1VGG9   A0A195F3M3   A0A026W5H4   A0A182QV60   A0A1L8DER7   A0A212FHI2   A0A1J1ID30   A0A1B6CVL2   E2AQQ7   A0A170YED1   A0A0K8V9L1   A0A0K8VS11   W5JJX5   A0A1L8DES7   A0A194R0I5   A0A182F4T6   A0A1L8DES8   A0A232EG30   A0A154PA03   A0A195D9S5   A0A1B6D5M6   A0A084W5W1   A0A1L8DES4   A0A1B0CA85   A0A2J7PCD0   A0A1Y1L5S2   A0A2J7PCD1   E2AWG6   A0A0L7RCU1   A0A0K8URW5   A0A151XEF5   W8AJH7   W8ARK5   B4NAX6   A0A0A9WF43   A0A1B6EAY6   A0A182RDP6   A0A182NTY1   A0A182YR73   A0A182PLP8   A0A182NU01   T1IEF0   A0A182UC24   A0A232F205   W5JPR7   A0A3L8DFP4   A0A1B6HRF8   A0A1B6HG49   A0A026X262   A0A1B6JUL2   A0A1S4EZY9   Q17K36  

PDB

5NVA     E-value=1.64193e-07,     Score=131

KEGG

101747147    no KO assigned | (RefSeq) sodium-coupled monocarboxylate transporter 2-like

GO

GO:0016021   GO:0022857   GO:0016020   GO:0016747   GO:0005215   GO:0006810   GO:0005515   GO:0004842   GO:0008270   GO:0016567   GO:0005634   GO:0006260   GO:0055085  

Length:

274

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

133.38698

Exp number, first 60 AAs:

36.62254

Total prob of N-in:

0.46040

POSSIBLE N-term signal

sequence

outside

1  -  9

TMhelix

10  -  29

inside

30  -  33

TMhelix

34  -  56

outside

57  -  78

TMhelix

79  -  101

inside

102  -  113

TMhelix

114  -  136

outside

137  -  139

TMhelix

140  -  162

inside

163  -  225

TMhelix

226  -  248

outside

249  -  274

 

 

Pi

214.844805

Theta

163.406862

Tajima's D

1.206481

CLR

0

CSRT

0.717514124293785

Interpretation

Uncertain