Gene

KWMTBOMO06743

Pre Gene Modal

BGIBMGA012132

Annotation

Sodium-coupled_monocarboxylate_transporter_2_[Papilio_xuthus]

Location

Bomo_Chr11(-):13658665-13666951      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.819

CDS

ATGTTTCTATTCTCACCTGCCGTTTTAGTTCCGCAATTCTTGAACCACCTGTCGACAATGTTTCCTGGTATCTGTGGTATATTCATTATATCGATATTCAGCGCCACTGCCGGGTGCATAGCAACGATAATTAATTCAATAACTGGAGTGTTGTTTGAGGAATTCATCAGGCCGTGGATGCCGCAAGACACCAACGAACTAACATGTTGCAAAATCATGAAAGTTCTTTGTATGCTGGTTGGGTGTTACTGCGCATGCGTGGTCTGGTTTGCGAAGGACTTAGACCGCTTGCAGCACGTCGCTTCAGGTGTGACAGGAGTATCTGCAGGCACTTTACTAGGCTTGTTCACGCTTGGCATTGTCTTCTCGAGGGCAAACAGTTGTGGTGCATTAGGAGGGAGCTTGCTAAGTCTACTCTTATGTGGATGGCTGCTCATTGGCGCGGAGAATTCTCTAGCAAGAGGTGCATTAACGTTCCAAGGAAAACCTTTGACAACCGCTGGCTGTGGCAAAGTCAACTTCACGCTCACCGCCTTTGATACCACTACAACTCCAATGCCTAATCTACTAAACCCAATCGCCAGCAAACCTCTTCAGTCACTCTTCAGGATATCATTCACGTACTGTCCGTTCGCTGGAGCAATAACGGTGTTGCTTATAGGCGTACCCCTAAGTTATATGACCGGAAAGTCTCGCACCGATTCCATGAACCCTGACGTATTCTGCCCGCTGACCCAGAGCATGCTGCACAAGCCCCAGATGCGAAGCAGGACCGTTTCCGTGGAGGCCAGAGCTCCGAACACTCAGGAAGTGTATTTAGCTTTGGACGAAGCTCTCAAGCACCTAAAGGATGTCATTGATCGATAA

Protein

MFLFSPAVLVPQFLNHLSTMFPGICGIFIISIFSATAGCIATIINSITGVLFEEFIRPWMPQDTNELTCCKIMKVLCMLVGCYCACVVWFAKDLDRLQHVASGVTGVSAGTLLGLFTLGIVFSRANSCGALGGSLLSLLLCGWLLIGAENSLARGALTFQGKPLTTAGCGKVNFTLTAFDTTTTPMPNLLNPIASKPLQSLFRISFTYCPFAGAITVLLIGVPLSYMTGKSRTDSMNPDVFCPLTQSMLHKPQMRSRTVSVEARAPNTQEVYLALDEALKHLKDVIDR

Similarity

Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.

Uniprot

A0A194PEC1   A0A2A4JNK8   A0A0N1IGB4   A0A2H1WJN4   A0A212F725   A0A1B6EH87   + More
A0A1B6EC94   A0A2J7PCC6   A0A2J7PCD2   A0A2J7PCD1   A0A2J7PCD0   A0A0T6AVN4   A0A0M8ZM94   A0A154PA03   A0A1W4WGZ1   A0A2P8ZEB9   A0A0C9RWR2   A0A1B6L6J6   A0A2J7QVC9   A0A067REM0   A0A1Y1L4L3   A0A026X262   A0A3L8DFP4   A0A182VW47   E9IR19   A0A1Y1L5S2   E0VXB0   A0A151WGZ9   A0A195BZT4   A0A195BP29   A0A158NDK2   A0A182RSH4   A0A0J7N294   A0A151XEF5   A0A195FWJ9   E2AWG6   A0A195DCV9   A0A2A3E2H5   A0A067RC05   A0A2J7PJL8   A0A0A9WF43   A0A182FS71   A0A088AH95   A0A182SGA4   A0A2R7VQN2   A0A0J7L3T5   A0A2J7QVB3   A0A1B6K7H1   A0A1W4XIB1   A0A1B6G815   A0A2J7QVB8   W5J189   F4WJQ2   A0A195D9S5   A0A034VW29   A0A034VXQ3   A0A3S2LA31   D6WJW9   A0A1B6JU79   A0A034VYN0   A0A139WI69   A0A1B6EV65   E2BY05   A0A0K8WKR1   A0A195F3M3   A0A1B0DBD6   A0A0K8U1A2   A0A1B6LPJ9   A0A0L7LDB5   A0A182K1U7   A0A195CLV6   F4W533   A0A2J7QVB4   A0A1J1HTS9   A0A182PJ36   A0A158NS68   A0A195BBB9   T1HJF5   A0A182NQW1   A0A182QU12   A0A0L7RCU1   A0A1B0CT26   E2BD54   A0A1B6JH88   A0A182L8F2   A0A026W5H4   Q16SA5   A0A1S4FR06   A0A182IYN7   A0A1B6M092   A0A1B6D7D6   A0A1W4X8M1   A0A182YHT2   A0A182TWQ2   A0A0A1XEH3   A0A182VI42   Q175Y8  

Pubmed

26354079    22118469    29403074    24845553    28004739    24508170    + More
30249741    21282665    20566863    21347285    20798317    25401762    20920257    23761445    21719571    25348373    18362917    19820115    26227816    20966253    17510324    25244985    25830018   

EMBL

KQ459606    KPI91701.1    NWSH01001031    PCG73023.1    KQ460499    KPJ14275.1    + More
ODYU01009109    SOQ53295.1    AGBW02009946    OWR49524.1    GEDC01000002    JAS37296.1    GEDC01001788    JAS35510.1    NEVH01027063    PNF13989.1    PNF13987.1    PNF13988.1    PNF13986.1    LJIG01022728    KRT79021.1    KQ438551    KOX67190.1    KQ434856    KZC08682.1    PYGN01000082    PSN54836.1    GBYB01013490    JAG83257.1    GEBQ01020648    JAT19329.1    NEVH01010477    PNF32536.1    KK852746    KDR17314.1    GEZM01068537    JAV66905.1    KK107031    EZA62128.1    QOIP01000008    RLU19285.1    GL765043    EFZ16973.1    GEZM01068536    JAV66906.1    DS235830    EEB18016.1    KQ983136    KYQ47116.1    KQ978457    KYM93850.1    KQ976424    KYM88272.1    ADTU01012644    LBMM01011538    KMQ86775.1    KQ982254    KYQ58745.1    KQ981208    KYN44687.1    GL443286    EFN62266.1    KQ980989    KYN10745.1    KZ288427    PBC25900.1    KDR17310.1    NEVH01024946    PNF16521.1    GBHO01037185    JAG06419.1    KK854027    PTY09716.1    LBMM01000877    KMQ97311.1    PNF32528.1    GECU01000325    JAT07382.1    GECZ01011177    JAS58592.1    PNF32527.1    ADMH02002189    ETN57897.1    GL888186    EGI65544.1    KQ981082    KYN09670.1    GAKP01012303    JAC46649.1    GAKP01012307    JAC46645.1    RSAL01000346    RVE42323.1    KQ971342    EFA03651.2    GECU01004941    JAT02766.1    GAKP01012309    JAC46643.1    KYB27604.1    GECZ01027950    JAS41819.1    GL451363    EFN79439.1    GDHF01000591    JAI51723.1    KQ981820    KYN35180.1    AJVK01004852    GDHF01032026    JAI20288.1    GEBQ01014345    JAT25632.1    JTDY01001579    KOB73472.1    KQ977600    KYN01452.1    GL887596    EGI70729.1    PNF32525.1    CVRI01000021    CRK91471.1    ADTU01024524    ADTU01024525    KQ976528    KYM81828.1    ACPB03021235    AXCN02001489    KQ414614    KOC68807.1    AJWK01026951    AJWK01026952    AJWK01026953    AJWK01026954    GL447569    EFN86362.1    GECU01009177    JAS98529.1    KK107399    QOIP01000002    EZA51327.1    RLU25917.1    CH477679    EAT37341.1    GEBQ01010667    JAT29310.1    GEDC01015697    JAS21601.1    GBXI01005399    JAD08893.1    CH477393    EAT41908.1   

Proteomes

UP000053268    UP000218220    UP000053240    UP000007151    UP000235965    UP000053105    + More
UP000076502    UP000192223    UP000245037    UP000027135    UP000053097    UP000279307    UP000075920    UP000009046    UP000075809    UP000078542    UP000078540    UP000005205    UP000075900    UP000036403    UP000078541    UP000000311    UP000078492    UP000242457    UP000069272    UP000005203    UP000075901    UP000000673    UP000007755    UP000283053    UP000007266    UP000008237    UP000092462    UP000037510    UP000075881    UP000183832    UP000075885    UP000015103    UP000075884    UP000075886    UP000053825    UP000092461    UP000075882    UP000008820    UP000075880    UP000076408    UP000075902    UP000075903   

Pfam

PF00474   SSF

Interpro

IPR038377   Na/Glc_symporter_sf        + More
IPR001734   Na/solute_symporter       
IPR023298   ATPase_P-typ_TM_dom_sf       

SUPFAM

SSF81665   SSF81665       

Gene 3D

1.20.1730.10    

ProteinModelPortal

A0A194PEC1   A0A2A4JNK8   A0A0N1IGB4   A0A2H1WJN4   A0A212F725   A0A1B6EH87   + More
A0A1B6EC94   A0A2J7PCC6   A0A2J7PCD2   A0A2J7PCD1   A0A2J7PCD0   A0A0T6AVN4   A0A0M8ZM94   A0A154PA03   A0A1W4WGZ1   A0A2P8ZEB9   A0A0C9RWR2   A0A1B6L6J6   A0A2J7QVC9   A0A067REM0   A0A1Y1L4L3   A0A026X262   A0A3L8DFP4   A0A182VW47   E9IR19   A0A1Y1L5S2   E0VXB0   A0A151WGZ9   A0A195BZT4   A0A195BP29   A0A158NDK2   A0A182RSH4   A0A0J7N294   A0A151XEF5   A0A195FWJ9   E2AWG6   A0A195DCV9   A0A2A3E2H5   A0A067RC05   A0A2J7PJL8   A0A0A9WF43   A0A182FS71   A0A088AH95   A0A182SGA4   A0A2R7VQN2   A0A0J7L3T5   A0A2J7QVB3   A0A1B6K7H1   A0A1W4XIB1   A0A1B6G815   A0A2J7QVB8   W5J189   F4WJQ2   A0A195D9S5   A0A034VW29   A0A034VXQ3   A0A3S2LA31   D6WJW9   A0A1B6JU79   A0A034VYN0   A0A139WI69   A0A1B6EV65   E2BY05   A0A0K8WKR1   A0A195F3M3   A0A1B0DBD6   A0A0K8U1A2   A0A1B6LPJ9   A0A0L7LDB5   A0A182K1U7   A0A195CLV6   F4W533   A0A2J7QVB4   A0A1J1HTS9   A0A182PJ36   A0A158NS68   A0A195BBB9   T1HJF5   A0A182NQW1   A0A182QU12   A0A0L7RCU1   A0A1B0CT26   E2BD54   A0A1B6JH88   A0A182L8F2   A0A026W5H4   Q16SA5   A0A1S4FR06   A0A182IYN7   A0A1B6M092   A0A1B6D7D6   A0A1W4X8M1   A0A182YHT2   A0A182TWQ2   A0A0A1XEH3   A0A182VI42   Q175Y8  

KEGG

101747147    no KO assigned | (RefSeq) sodium-coupled monocarboxylate transporter 2-like

GO

GO:0016021   GO:0022857   GO:0005215   GO:0006810   GO:0016020   GO:0005515   GO:0004842   GO:0008270   GO:0016567   GO:0005634   GO:0006260   GO:0055085  

Length:

288

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

113.9263

Exp number, first 60 AAs:

28.59582

Total prob of N-in:

0.01006

POSSIBLE N-term signal

sequence

outside

1  -  19

TMhelix

20  -  52

inside

53  -  71

TMhelix

72  -  91

outside

92  -  100

TMhelix

101  -  123

inside

124  -  129

TMhelix

130  -  147

outside

148  -  203

TMhelix

204  -  226

inside

227  -  288

 

 

Pi

227.800353

Theta

157.982173

Tajima's D

0.859851

CLR

0.17827

CSRT

0.624318784060797

Interpretation

Uncertain