Gene

KWMTBOMO06736

Pre Gene Modal

BGIBMGA012136

Annotation

PREDICTED:_ADP-ribosylation_factor-like_protein_4C_[Papilio_polytes]

Location

Bomo_Chr11(-):13258635-13262792      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.421 Mitochondrial   Reliability : 2.066

CDS

ATGGGTGCGAATATGGGCAAAAACTCGAGCCTACTTGACGCGTTGCCTACCGCTCAGGGCACGCTCCACGTCGTCATGTTGGGCCTCGACTCAGCAGGGAAAACTACTGCACTATACAGACTCAAATTTGATCAATACTTAAACACCGTCCCCACTATTGGATTTAACTGCGAAAAGGTTAAAGGAACCATTGGAAAATCGAAGGGTGTGAACTTTCTAGTTTGGGATGTTGGCGGCCAGGAAAAACTAAGACCTCTTTGGAAATCGTACACACGTTGTACTGATGGTATAATTTTCGTATTAGACTCAGTCGACGTCGAACGAATGGAGGAAGCAAAAATGGAACTAATACGAACGGCAAAATCGCCAGATAATGCATGCGTGCCAATTCTAGTGTTAGCCAACAAACAGGATTTACCTGGGGCGAAAGAGCCTCGTGACCTCGAAAAGTTGCTTGGCCTGCATGAGCTGGTTTCTTCTCCACATGGCTCACGTGACGCACATGCGTGGCACGTTCAGCCAGCTTGTGCCATTACAGGGGAAGGCTTACACGAAGGTCTGGAAGTGCTTTACGAAATGATACTCAAGAGACGAAAACTGGCAAAGCTACAGAAAAAGCGCGTCAAATAA

Protein

MGANMGKNSSLLDALPTAQGTLHVVMLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVKGTIGKSKGVNFLVWDVGGQEKLRPLWKSYTRCTDGIIFVLDSVDVERMEEAKMELIRTAKSPDNACVPILVLANKQDLPGAKEPRDLEKLLGLHELVSSPHGSRDAHAWHVQPACAITGEGLHEGLEVLYEMILKRRKLAKLQKKRVK

Similarity

Belongs to the small GTPase superfamily. Arf family.

Uniprot

H9JRH6   A0A2A4K8Z2   A0A0L7L0A9   S4PRH6   A0A0N1PI23   A0A194PKR8   + More
A0A1W4XIG6   A0A1B6IWZ7   A0A1B6GPE7   A0A067RDJ9   A0A1B6KTQ6   V5GH43   A0A212F5S8   A0A0P4VYY1   R4FN34   A0A224XPP7   A0A0V0GBK6   A0A023FB36   A0A069DQ04   M4VQI4   A0A1Y1JTK3   D6WGB7   A0A0A9WL49   A0A2P8Y1I4   A0A2R7VPK7   A0A0T6B5C9   E0VL35   A0A2R5LCV7   A0A1Z5LA82   A0A2H8U2X8   J9JTP7   A0A2S2P2Z6   A0A2S2QHM3   N6TH09   A0A164LDM0   A0A3S3P967   A0A1J1IIF4   A0A1L8DV90   A0A2P6KY69   A0A023GFV2   A0A1E1XQ60   A0A1E1WZD9   A0A087T1H7   A0A151IVY9   A0A026X021   F4WDM6   A0A195FUQ7   A0A158NXV9   A0A151WIC7   E2BZQ6   E2B0J7   E9G1Y4   A0A154P1D0   A0A087UA16   V9IF96   A0A088AM74   A0A131XEP9   A0A2P6JZ60   A0A224YH46   A0A131Z7T9   L7M0R8   A0A0P6BRF2   T1IKC8   K7IMS8   A0A0L7RF92   A0A1S3CW71   A0A2A3EAQ1   T1KBD2   A0A226EH43   A0A131Y0N1   B7PRK4   A0A1D2NKZ0   A0A151HZA9   T1GCK2   A0A034WAL1   A0A0N0U5H8   A0A0L0C3P2   A0A310S9B0   B4NHK1   T1KYC0   A0A1S3I5F9   A0A0P4ZFJ2   A0A1V9XCA1   B4MEX2   A0A0K8WL37   B4L7E5   A0A336L424   A0A0A1X2M7   B4JZQ5   B4H857   Q29CS8   A0A336MLS5   A0A0N8NZJ8   A0A1W4VKT0   R7VBW7   A0A0Q5SFE7   B3P9V4   H9XVM3   U5ERB8   A0A0J9US75  

Pubmed

19121390    26227816    23622113    26354079    24845553    22118469    + More
27129103    25474469    26334808    23497596    28004739    18362917    19820115    25401762    26823975    29403074    20566863    28528879    23537049    29209593    28503490    24508170    30249741    21719571    21347285    20798317    21292972    28049606    28797301    26830274    25576852    20075255    27289101    25348373    26108605    17994087    28327890    18057021    20479145    25830018    15632085    23254933    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249   

EMBL

BABH01016476    NWSH01000021    PCG80667.1    JTDY01003833    KOB68938.1    GAIX01000785    + More
JAA91775.1    KQ460499    KPJ14281.1    KQ459606    KPI91695.1    GECU01016245    JAS91461.1    GECZ01032416    GECZ01030639    GECZ01026896    GECZ01025350    GECZ01024302    GECZ01024022    GECZ01018727    GECZ01016944    GECZ01009926    GECZ01008660    GECZ01006408    GECZ01005467    GECZ01003709    GECZ01003507    GECZ01001908    GECZ01000343    JAS37353.1    JAS39130.1    JAS42873.1    JAS44419.1    JAS45467.1    JAS45747.1    JAS51042.1    JAS52825.1    JAS59843.1    JAS61109.1    JAS63361.1    JAS64302.1    JAS66060.1    JAS66262.1    JAS67861.1    JAS69426.1    KK852533    KDR21842.1    GEBQ01025142    JAT14835.1    GALX01005137    JAB63329.1    AGBW02010142    OWR49092.1    GDKW01000773    JAI55822.1    ACPB03006731    ACPB03006732    GAHY01000723    JAA76787.1    GFTR01003372    JAW13054.1    GECL01000741    JAP05383.1    GBBI01000574    JAC18138.1    GBGD01002989    JAC85900.1    KC190027    AGI03912.1    GEZM01101487    GEZM01101486    JAV52632.1    KQ971329    EFA01144.1    GBHO01035090    GBRD01008073    GDHC01012678    JAG08514.1    JAG57748.1    JAQ05951.1    PYGN01001049    PSN38122.1    KK854004    PTY09058.1    LJIG01009728    KRT82500.1    DS235269    EEB14091.1    GGLE01003224    MBY07350.1    GFJQ02002755    JAW04215.1    GFXV01008133    MBW19938.1    ABLF02036596    GGMR01010647    MBY23266.1    GGMS01008035    MBY77238.1    APGK01038223    KB740954    KB632311    ENN77053.1    ERL92133.1    LRGB01003146    KZS04012.1    NCKU01000048    RWS17668.1    CVRI01000054    CRL00021.1    GFDF01003726    JAV10358.1    MWRG01003703    PRD31274.1    GBBM01002636    JAC32782.1    GFAA01001996    JAU01439.1    GFAC01006813    JAT92375.1    KK112970    KFM58966.1    KQ980882    KYN11960.1    KK107054    QOIP01000004    EZA61448.1    RLU24100.1    GL888089    EGI67687.1    KQ981261    KYN44156.1    ADTU01003628    KQ983089    KYQ47602.1    GL451657    EFN78818.1    GL444624    EFN60792.1    GL732529    EFX86726.1    KQ434796    KZC05735.1    KK118921    KFM74205.1    JR041010    AEY59342.1    GEFH01003092    JAP65489.1    MWRG01063234    PRD19361.1    GFPF01005840    MAA16986.1    GEDV01002326    JAP86231.1    GACK01007108    JAA57926.1    GDIP01011240    JAM92475.1    JH430488    KQ414608    KOC69386.1    KZ288313    PBC28372.1    CAEY01001946    LNIX01000003    OXA56983.1    GEFM01003771    JAP72025.1    ABJB010970353    DS773109    EEC09226.1    LJIJ01000013    ODN05948.1    KQ976709    KYM77056.1    CAQQ02031189    GAKP01008119    JAC50833.1    KQ435791    KOX74382.1    JRES01001020    KNC26094.1    KQ767621    OAD53368.1    CH964272    EDW83570.1    CAEY01000711    GDIP01214055    JAJ09347.1    MNPL01015284    OQR71147.1    CM000831    CH940665    ACY70541.1    EDW71073.1    GDHF01029965    GDHF01014519    GDHF01000527    JAI22349.1    JAI37795.1    JAI51787.1    CH933813    EDW10939.1    UFQS01001504    UFQT01001504    SSX11289.1    SSX30857.1    GBXI01009156    JAD05136.1    CH916380    EDV90921.1    CH479221    EDW34857.1    CH475413    EAL29334.2    UFQT01000750    SSX26958.1    CH902672    KPU74524.1    AMQN01004372    KB293367    ELU16057.1    CH954184    KQS21519.1    EDV45267.1    AE014135    AFH06768.1    GANO01003821    JAB56050.1    CM002916    KMZ07156.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000053268    UP000192223    + More
UP000027135    UP000007151    UP000015103    UP000007266    UP000245037    UP000009046    UP000007819    UP000019118    UP000030742    UP000076858    UP000285301    UP000183832    UP000054359    UP000078492    UP000053097    UP000279307    UP000007755    UP000078541    UP000005205    UP000075809    UP000008237    UP000000311    UP000000305    UP000076502    UP000005203    UP000002358    UP000053825    UP000079169    UP000242457    UP000015104    UP000198287    UP000001555    UP000094527    UP000078540    UP000015102    UP000053105    UP000037069    UP000007798    UP000085678    UP000192247    UP000008792    UP000009192    UP000001070    UP000008744    UP000001819    UP000007801    UP000192221    UP000014760    UP000008711    UP000000803   

PRIDE

H9JRH6   

Pfam

PF00025   Arf        + More
PF02826   2-Hacid_dh_C
PF00389   2-Hacid_dh

Interpro

IPR027417   P-loop_NTPase        + More
IPR006689   Small_GTPase_ARF/SAR       
IPR005225   Small_GTP-bd_dom       
IPR029752   D-isomer_DH_CS1       
IPR006139   D-isomer_2_OHA_DH_cat_dom       
IPR006140   D-isomer_DH_NAD-bd       
IPR036291   NAD(P)-bd_dom_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF51735   SSF51735       

ProteinModelPortal

H9JRH6   A0A2A4K8Z2   A0A0L7L0A9   S4PRH6   A0A0N1PI23   A0A194PKR8   + More
A0A1W4XIG6   A0A1B6IWZ7   A0A1B6GPE7   A0A067RDJ9   A0A1B6KTQ6   V5GH43   A0A212F5S8   A0A0P4VYY1   R4FN34   A0A224XPP7   A0A0V0GBK6   A0A023FB36   A0A069DQ04   M4VQI4   A0A1Y1JTK3   D6WGB7   A0A0A9WL49   A0A2P8Y1I4   A0A2R7VPK7   A0A0T6B5C9   E0VL35   A0A2R5LCV7   A0A1Z5LA82   A0A2H8U2X8   J9JTP7   A0A2S2P2Z6   A0A2S2QHM3   N6TH09   A0A164LDM0   A0A3S3P967   A0A1J1IIF4   A0A1L8DV90   A0A2P6KY69   A0A023GFV2   A0A1E1XQ60   A0A1E1WZD9   A0A087T1H7   A0A151IVY9   A0A026X021   F4WDM6   A0A195FUQ7   A0A158NXV9   A0A151WIC7   E2BZQ6   E2B0J7   E9G1Y4   A0A154P1D0   A0A087UA16   V9IF96   A0A088AM74   A0A131XEP9   A0A2P6JZ60   A0A224YH46   A0A131Z7T9   L7M0R8   A0A0P6BRF2   T1IKC8   K7IMS8   A0A0L7RF92   A0A1S3CW71   A0A2A3EAQ1   T1KBD2   A0A226EH43   A0A131Y0N1   B7PRK4   A0A1D2NKZ0   A0A151HZA9   T1GCK2   A0A034WAL1   A0A0N0U5H8   A0A0L0C3P2   A0A310S9B0   B4NHK1   T1KYC0   A0A1S3I5F9   A0A0P4ZFJ2   A0A1V9XCA1   B4MEX2   A0A0K8WL37   B4L7E5   A0A336L424   A0A0A1X2M7   B4JZQ5   B4H857   Q29CS8   A0A336MLS5   A0A0N8NZJ8   A0A1W4VKT0   R7VBW7   A0A0Q5SFE7   B3P9V4   H9XVM3   U5ERB8   A0A0J9US75  

PDB

4FME     E-value=5.63108e-40,     Score=409

KEGG

101736246    K07945 ADP-ribosylation factor-like protein 4 | (RefSeq) ADP-ribosylation factor-like protein 4C

GO

GO:0005525   GO:0006886   GO:0005886   GO:0016192   GO:0005737   GO:0032154   GO:0016616   GO:0051287   GO:0005622   GO:0007264   GO:0006412   GO:0016705   GO:0020037   GO:0006811   GO:0016020   GO:0005634   GO:0006260  

Length:

209

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.24461

Exp number, first 60 AAs:

0.2403

Total prob of N-in:

0.21711

outside

1  -  209

 

 

Pi

150.713235

Theta

156.684438

Tajima's D

-0.819362

CLR

0.115475

CSRT

0.171291435428229

Interpretation

Uncertain