Silkworm Genome Informatics Database

Gene

KWMTBOMO06717

Pre Gene Modal

BGIBMGA011738

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_regulating_synaptic_membrane_exocytosis_protein_2_[Bombyx_mori]

Location

Bomo_Chr11(+):13042040-13085992 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.489

CDS

ATGGTGGCGACCGAAGACACGACAAGTACTGTGCCTGGGCAGATAGAATCGCCAGGCACTTTCGGAAAACTACGCCAAACACTTTCTTCATCGTTACTCAACGCCCAAGACAAAGTAACAAAACTAGGCCCAAAACAAGGAGTGACGGAAAGTGCGGTCGAACCAGCGCCGACCCCACCACCAGGCCAGCCGCCGCCCGCCGCGCAACCTAAAACCGAGCGCGAGCCCGGCAAAGCTCCGTCTCGTGCTGGTGCTTGTCGCGTCTGCTTGAAGGCACTGAAGCCTGGTGAGGTGTTTCATGTCTGCAACGGATGCCAGCATCGCGTTTGCGAGGACTGCTCGTCATATTCGAAGCCGGCTAGTGACGATGAAGCGAACTCATGGAGGTGCTCAGTGTGTCGTCGAAAGGCAGCCCCGCGACTCCCACCGGCCGCGCAGGACAGCACAGATTCTCTGTTGGATGTGCCGGTACTGGACGCACTGCAGCGACGACATTCAGAAGCTCGCCTCGGCAGCGGAGGCTCTGGGTCCGGCCTCGCACCGCCGCGCTCCCCAGAACTGCGTCGGCACTCTGACGTGTCACCGGCCTCACTCAAGGAATTGGAAAAATCAACGCCCAGGGTAATTGTCACTCAAACCCGTTTCTGCCCACTACGAACGACAGGCGTGAAGTTGAAGGGCGGCGGGAGCGCTACCCCAGCGGCGTCCGAGTCCCGGCGTCCCAGCGCAGCTACCCCAGTGCGCAGACGCTCCGTGCGAGCCCCTCGACAGCGCTCTGTAGACGAAGACCAACACTCTCCCGTGCATCAGCCTGTTCTGGCTGCACCACCTCCTATGTCTAGAAGAGCGTCAGCAGTAGATGTGGTGGCGGGAGCGGGATCACGTAGGAGCTCCTATCGCACGGAAGATGACTCACCTCCCCAAATATCGGGACTGAGTGTCGACGAGGACAGACCGATAAGACGCCGCGGCAGTCAGCTACCAGATATAGCTGCGCTACAGCAGCGTACGGGTGCATTAAGTGCAATGGCGTCTCTGGCCGGCCGCTGTCCTGAGCCGACCGTCGATTCTTCAGTCGTGTCAGCCGCGGCTGCAGCCGCTGCTAGGCAGATGTCCGTCGACGCAGAAGCTATAAAAATCGTCATCCACGACGTCGACGATCGCACACCGCGACGCGTCAGCCTGCGCCGCGATCCCAATGACAAGGGACATAGATCACGGGGTTTTGGGATGCGCGTAGTCGGCGGCAAGCCAGACGCGAGCGGACGCCGCGAGGCCGTCATAGTGTGGACAGTCCCGGGGAGCCCTGCCGACCTCGCGGGACTTCAGCAAGGCGACAAGGTATTGGAATGGGACGGAGTTCCACTGACTGAGCGTAGCTTCGAGGAAGTGTGCGCGGTGTTGGAGCGCGGCGGTGACAGCGTGGAGGTTCTGGTGGAGCCCGCCCCGCAGCTGGACGATCCGCCGCTGACTACTCAGCCGACGTTACACCATCACGCATTATACGAACCTGAAACCGACAAATCTCCATCGTCGCCGACTCGACGGAAATTGCCGAAAACCCCGGAACAAGACCGCGCGGAGAGGGCTCGTGAGCGTCCATCGGCACGCGCTCAACTGCAAGTCTGGTTCGAGAGTGAAATCCGAAAGCTAGTGGTCGTACTCATTGCAGCCGATGACCTGCCGCCACGAGACTACACTTTGGGATACGGCGACGAACCAGAAGCTTTTGCCAGAATACGACTATTGCCCTCACTAGAAAGTTGTCCTCCAGTGGAAACCGATCCAGCTTCAGCATCATGCAGCCCCGTGTGGAACGCTACACTGGGCTTCGGAGGCTTAACAGCAGATTTACTGGCTGGAAGAGCTCTCGAGCTAACTCTCTGGGACGCTTGCCCTGGAATAGATCCTGTTTTGATTGGAGAGTGCACCATGGAGCTGGAGAAAGCGTTTGCAGAGGAGCGCGCAGTCTGGTGGACGCTGGAGGAGCGCGGGACTCGGTCCGCTAATGCGTCACCGCGAGGCTCGCTAACAGGCGCCCGGGCTCTGCGCCGTGGTGACTTCGCATCGCAACGATCGATTTCTGATGATGTTGACTCAATCGGGGAATGTGCGTCCCTTCTGCATCCCGACCACGCTTGGGTAGCCGGCTCTCGTCGAGGATCTTCTCAATCCGAAACATTGGAAGTAGAAGTCTACCAGCTCGGAAAAGACTTTTCTCGATCTTTGCCTGGATCGCGTCGCTCTTCTTTCCAACAACAAGAAAAAGACGGCGTTGGCGAAGTGGTGCCGCGTCGCAACGAGCGTCGCCGGTCGTCGTGCGTACGCCGTGACCCGGACGACATCCTGCGCTCACTCCGCGCCGTCAAGGGAGAGCTGGGCCGTACCCTCTCCCTCTCTGGCTCCACCGCCAGGCCGACGGACCGCACGGCGACGGGCCGCAAGGGCAGCATGTGGGCGGCGGTGCCGGCGGCTGCGGCTTGCGACGCGCTCGCCGACGACGAAGACGTCGTGCCGCTCGGCCCGGGACAGCTACCTCCACGAAACGCACACTTGCCTCCTCTACACGCAGAAATGAATATCAGCATCATTATGATCAAGGGACAACTGGAACTCGAGGTATCTCATGCGAGGCGAGTGTATGGCGTGAACGGTGAAGTTCCGGACTCGTATGTTAAATGCTATCTGCGAGACGGCGACAAATGGCTACATAAACGCAAAACACGCGTCATCAGACGTACGACCGAGCCTCACTTTAAGCAAACCCTAAAATATCAAGCGAGCGAGGCTCTTGGTCGTACTCTGGTGGTGATGCTGTGGCAGCGTTGCGGCGGATTCGAGCACAACCTGGCACTGGGCGGTGCAGAGATATGCTTAGATAAGTTGACGCTGCCACAGCGCACTTATGGCTGGTACCCACTATTCCCGGCCACGTCCTTCGCCGCTGACGAGTCGCCAGACTGA

Protein

MVATEDTTSTVPGQIESPGTFGKLRQTLSSSLLNAQDKVTKLGPKQGVTESAVEPAPTPPPGQPPPAAQPKTEREPGKAPSRAGACRVCLKALKPGEVFHVCNGCQHRVCEDCSSYSKPASDDEANSWRCSVCRRKAAPRLPPAAQDSTDSLLDVPVLDALQRRHSEARLGSGGSGSGLAPPRSPELRRHSDVSPASLKELEKSTPRVIVTQTRFCPLRTTGVKLKGGGSATPAASESRRPSAATPVRRRSVRAPRQRSVDEDQHSPVHQPVLAAPPPMSRRASAVDVVAGAGSRRSSYRTEDDSPPQISGLSVDEDRPIRRRGSQLPDIAALQQRTGALSAMASLAGRCPEPTVDSSVVSAAAAAAARQMSVDAEAIKIVIHDVDDRTPRRVSLRRDPNDKGHRSRGFGMRVVGGKPDASGRREAVIVWTVPGSPADLAGLQQGDKVLEWDGVPLTERSFEEVCAVLERGGDSVEVLVEPAPQLDDPPLTTQPTLHHHALYEPETDKSPSSPTRRKLPKTPEQDRAERARERPSARAQLQVWFESEIRKLVVVLIAADDLPPRDYTLGYGDEPEAFARIRLLPSLESCPPVETDPASASCSPVWNATLGFGGLTADLLAGRALELTLWDACPGIDPVLIGECTMELEKAFAEERAVWWTLEERGTRSANASPRGSLTGARALRRGDFASQRSISDDVDSIGECASLLHPDHAWVAGSRRGSSQSETLEVEVYQLGKDFSRSLPGSRRSSFQQQEKDGVGEVVPRRNERRRSSCVRRDPDDILRSLRAVKGELGRTLSLSGSTARPTDRTATGRKGSMWAAVPAAAACDALADDEDVVPLGPGQLPPRNAHLPPLHAEMNISIIMIKGQLELEVSHARRVYGVNGEVPDSYVKCYLRDGDKWLHKRKTRVIRRTTEPHFKQTLKYQASEALGRTLVVMLWQRCGGFEHNLALGGAEICLDKLTLPQRTYGWYPLFPATSFAADESPD

Uniprot

A0A2H1W749 A0A3S2LXE1 A0A2A4KAB8 A0A2A4K9D3 A0A194PF75 A0A212EVD2 + More
A0A0L7LKP1 A0A139WJY0 A0A1J1J0P8 A0A088AQQ2 A0A2S2NT35 A0A158NPC7 A0A2S2QMG8 A0A3L8DJ43

Pubmed

26354079 22118469 26227816 18362917 19820115 21347285 + More
30249741

EMBL

ODYU01006762 SOQ48900.1 RSAL01000137 RVE46189.1 NWSH01000021 PCG80680.1 + More
PCG80679.1 KQ459606 KPI91678.1 AGBW02012204 OWR45458.1 JTDY01000755 KOB76000.1 KQ971329 KYB28348.1 CVRI01000063 CRL04425.1 GGMR01007695 MBY20314.1 ADTU01001558 ADTU01001559 ADTU01001560 ADTU01001561 ADTU01001562 ADTU01001563 ADTU01001564 ADTU01001565 ADTU01001566 ADTU01001567 GGMS01009753 MBY78956.1 QOIP01000007 RLU20232.1

Proteomes

UP000283053 UP000218220 UP000053268 UP000007151 UP000037510 UP000007266 + More
UP000183832 UP000005203 UP000005205 UP000279307

Pfam

PF00168   C2        + More
PF17820   PDZ_6
PF00078   RVT_1
PF00595   PDZ

Interpro

IPR039032   Rim-like        + More
IPR001478   PDZ
IPR000008   C2_dom
IPR001841   Znf_RING
IPR041489   PDZ_6
IPR036034   PDZ_sf
IPR035892   C2_domain_sf
IPR013083   Znf_RING/FYVE/PHD
IPR011011   Znf_FYVE_PHD
IPR000477   RT_dom
IPR017907   Znf_RING_CS

SUPFAM

SSF50156 SSF50156 + More
SSF57903 SSF57903

Gene 3D

2.60.40.150 3.30.40.10

ProteinModelPortal

A0A2H1W749 A0A3S2LXE1 A0A2A4KAB8 A0A2A4K9D3 A0A194PF75 A0A212EVD2 + More
A0A0L7LKP1 A0A139WJY0 A0A1J1J0P8 A0A088AQQ2 A0A2S2NT35 A0A158NPC7 A0A2S2QMG8 A0A3L8DJ43

PDB

2Q3X E-value=7.36337e-16, Score=209

KEGG

101745839 no KO assigned | (RefSeq) regulating synaptic membrane exocytosis protein 2

GO

GO:0017137 GO:0016020 GO:0006887 GO:0042391 GO:0050806 GO:2000300 GO:0045202 GO:0098831 GO:0048788 GO:0044325 GO:0048167 GO:0042734 GO:0048791 GO:0005515 GO:0008270 GO:0043565 GO:0008242 GO:0016705 GO:0020037 GO:0006811 GO:0005634 GO:0006260

PANTHER

PTHR12157

Length:

987

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00037

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00002

outside

1 - 987

Pi

259.850333

Theta

183.359628

Tajima's D

0.960441

CLR

0.085754

CSRT

0.650317484125794

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics