Pre Gene Modal
BGIBMGA011737
Annotation
PREDICTED:_transcription_initiation_factor_IIA_subunit_1_[Amyelois_transitella]
Location in the cell
Nuclear Reliability : 4.061
Sequence
CDS
ATGACAACGAGTCAGCTCGCAGTATTGAAACTTTACAACATAGTGGTAGACGACGTGATATCCGGAGTGAGAAATTCTTTCTTAGATGACGGTGTAGACGAACAAGTGTTACAAGAACTAAAACAACTATGGAAGACAAAGCTTCAAGCCAGTGGAGCCACGGACCCGTTACAACCTGAGCCGATGCTGCCACCTCCTCCAGTGTTACAGAATTTCCAAAAAGTAAATGGTAGTAATGTAGTGCATAAAAGAACTGACATGGGACATACTTCGGGGCAACAAGAACATAGTGCACCAGCATCTAGTGTAGCTGGAACGCATACTCATCATATTCTAGACCCTAATAATAAAGTGCCAGTTCAGCTTACATTACCTGCTCAACCTGGAGTTCCAGGGTCCCAGCCTCGTTCATTTACCATTCAAATTCCAGCATCAGCTCTGAACGGCAACAAACTGCATCAGGTCTTAACAGGTCCTATAATAAATGCTACCATTAGCCTTCCACAACCTCTAGCTGCTACTTTACTGCAACAACATATCAACTCGGCTTTAGCAGGACAAAAAAGTGATTTTGATAGCGGCGGAGGCGGCCGCAGTGGAACTGCTCCTTTCTCTTTAGATGGTGCTTTGGACTCTTCTGATGATGATGGCTCAAACGTAGGTGATGGTTCAGAAGACGGTGCAGCAGATGATGATGATGATGACGATTCTCCCGAAGAGCGGGCAGAAGAAGAAGAAGAAGAACAAAATGAAAGTGGTGGTGCTGAAGAAGAACCCCTAAATTCCGGTGATGATGTATCTGATGAGGAGCCAGGGGACATGTTTGATACTGATAATGTAGTTGTTTGCCAATATGATAAAATTACACGCAGTCGCAATAGGTGGAAGTTCTATCTCAAAGATGGAATCATGAATCTAGCTGGAAAGGATTATGTATTCCAAAAGGCTAATGGTGATGCGGAATGGTGA
Protein
MTTSQLAVLKLYNIVVDDVISGVRNSFLDDGVDEQVLQELKQLWKTKLQASGATDPLQPEPMLPPPPVLQNFQKVNGSNVVHKRTDMGHTSGQQEHSAPASSVAGTHTHHILDPNNKVPVQLTLPAQPGVPGSQPRSFTIQIPASALNGNKLHQVLTGPIINATISLPQPLAATLLQQHINSALAGQKSDFDSGGGGRSGTAPFSLDGALDSSDDDGSNVGDGSEDGAADDDDDDDSPEERAEEEEEEQNESGGAEEEPLNSGDDVSDEEPGDMFDTDNVVVCQYDKITRSRNRWKFYLKDGIMNLAGKDYVFQKANGDAEW
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF03153 TFIIA
SUPFAM
SSF50784
SSF50784
Gene 3D
ProteinModelPortal
PDB
1NVP
E-value=1.7455e-23,
Score=269
Ontologies
GO
PANTHER
Topology
Length:
322
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00498999999999999
Exp number, first 60 AAs:
0.00093
Total prob of N-in:
0.02327
outside
1 - 322
Population Genetic Test Statistics
Pi
177.320302
Theta
170.676628
Tajima's D
0.175671
CLR
0.097946
CSRT
0.419129043547823
Interpretation
Uncertain
