Gene

KWMTBOMO06713

Annotation

activating_transcription_factor_of_chaperone_[Bombyx_mori]

Location

Bomo_Chr11(+):12892820-12916669      View in EpiBrowser

Transcription factor

TF_bZIP

Location in the cell

Nuclear   Reliability : 3.497

CDS

ATGAGTGCGAGTCAGAAGGAGTCATGGGCTGCGGCCATCGATTTGCTCACTAACGATGAGTGCCGTTTGCTGCTCGAAGTTGAGGATTTCTTCAATGATGATTGTGATCTGCTTAAAAACTTTCCGAGCGCTGCAACGAAGATCGAAATCAATAACACCACGAGTTTCTACCCGCCATCACCGCCGGAGTTGAAACCAAGTCCCGCCGAACTCGCTAACGATCTTCTGCAGCAGCTAGACAGTCAATGCAAACAAGAGAATATTTTCTCCAACTGGTTAGAGGAAAAAGTTGACCTCCCTTCGATCTTCGAAAACATTTCTGAAGTTCCTGAACGCGTGGACCCACAACCCCCGGCAGCGGTTCTAGCTTCAAGTCCTTTTGTGACCTCGCAGCCCACTGAAGAACTGCTGCGGGAATTCGAAACGGTTTATGGTGCTGTCGAGTTAACGCATTTAACACCGCCGCAGAGTCCGCCGGGACCCGCGACTCAGTTGCTTCTGAGTTACGCTCAACAAGCACAATGCACAGCACTAGCACCTCCAGCTCCCCTGGCACCGCCGCAAGAAGCGTGGCAGATTGTGGCACCTGTTCCGGTTAACCAGCTGCCGGAAGGTTACGAGTGTGACTTGGACGCCGTCGAGGAACTGGTCCGTCACCGAGCCTCTCAACTGGCATCTCCGCAACATTCCAGTAGTAGTGCTAATGCCTCTCCACGTTCTTCACCACCATCATCGCCGCGTTCCTCATCGACCGACGAGGACTGGTCCGCACCGTCACGTTTGAAGACGCGTTCTGTAGATGACCGTCGTTCACGCAAGAAGGAGCAAAATAAAAATGCTGCTACTCGTTACCGTCAGAAGAAAAAGGCCGAAGTGGAGGTGCTCCTCAAGGAGGAGCAGACCCTGCGCCAGCGTCACACCGAACTCGGGGAGAAGTGCTCTGACCTCCAAAGAGAGATTCGCTACCTAAAGGCTCTGATGCGTGATCTTTTCAAGGCGAAGGGTCTAATCAAGTAA

Protein

MSASQKESWAAAIDLLTNDECRLLLEVEDFFNDDCDLLKNFPSAATKIEINNTTSFYPPSPPELKPSPAELANDLLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAVELTHLTPPQSPPGPATQLLLSYAQQAQCTALAPPAPLAPPQEAWQIVAPVPVNQLPEGYECDLDAVEELVRHRASQLASPQHSSSSANASPRSSPPSSPRSSSTDEDWSAPSRLKTRSVDDRRSRKKEQNKNAATRYRQKKKAEVEVLLKEEQTLRQRHTELGEKCSDLQREIRYLKALMRDLFKAKGLIK

Uniprot

I4DM42   A0A0N1PGT9   I4DJ30   A0A194PE97   A0A3G1T192   A0A2A4K9V0   + More
S4NXV5   A0A2H1W2B8   A0A212FF53   A0A088AAE4   A0A0M4N2C3   D6WDB8   A0A023PPK0   A0A023PPZ9   A0A0M9A7D8   A0A023PPS6   A0A023PP78   A0A1W4XPL2   A0A1W4XNT0   A0A336M5V7  

Pubmed

22651552    26354079    23622113    22118469    18362917    19820115    + More

EMBL

AK402360    BAM18982.1    KQ460499    KPJ14306.1    AK401298    BAM17920.1    + More
KQ459606    KPI91676.1    MG846899    AXY94751.1    NWSH01000021    PCG80684.1    GAIX01012002    JAA80558.1    ODYU01005626    SOQ46664.1    AGBW02008852    OWR52364.1    KR075827    ALE20546.1    KJ405472    KJ405477    KQ971321    AHX26752.1    AHX26757.1    EEZ99481.1    KJ405475    AHX26755.1    KJ405474    AHX26754.1    KQ435727    KOX77986.1    KJ405473    AHX26753.1    KJ405476    AHX26756.1    UFQS01000603    UFQT01000603    SSX05293.1    SSX25654.1   

Proteomes

UP000053240    UP000053268    UP000218220    UP000007151    UP000005203    UP000007266    + More
UP000053105    UP000192223   

Pfam

PF00170   bZIP_1

Interpro

IPR004827   bZIP       

ProteinModelPortal

I4DM42   A0A0N1PGT9   I4DJ30   A0A194PE97   A0A3G1T192   A0A2A4K9V0   + More
S4NXV5   A0A2H1W2B8   A0A212FF53   A0A088AAE4   A0A0M4N2C3   D6WDB8   A0A023PPK0   A0A023PPZ9   A0A0M9A7D8   A0A023PPS6   A0A023PP78   A0A1W4XPL2   A0A1W4XNT0   A0A336M5V7  

PDB

1CI6     E-value=0.00858901,     Score=91

KEGG

692594    K04374 cyclic AMP-dependent transcription factor ATF-4 | (RefSeq) Atf, ATFC; activating transcriptio

PATHWAY

04137    Mitophagy - animal - Bombyx mori (domestic silkworm)
04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)
04214    Apoptosis - fly - Bombyx mori (domestic silkworm)

GO

GO:0003700   GO:0000977   GO:0000981   GO:0006357   GO:0005634   GO:0006355   GO:0043565   GO:0008242   GO:0016705   GO:0020037   GO:0006811   GO:0016020   GO:0006260  

Length:

338

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03427

outside

1  -  338

 

 

Pi

160.959702

Theta

167.493595

Tajima's D

-0.742238

CLR

1.738501

CSRT

0.187890605469727

Interpretation

Uncertain