SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06706  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011733
Annotation
PREDICTED:_integral_membrane_protein_GPR155_isoform_X2_[Bombyx_mori]
Full name
Integral membrane protein GPR155      
Alternative Name
G-protein coupled receptor PGR22
Location in the cell
PlasmaMembrane   Reliability : 4.913
 

Sequence

CDS
ATGGAGCAAATTCAACTTAATCTTGGAGATACTACAACCGACAATTTGTATCCAGCCCTATTTCAGTGTTTTACAATTATCATTTGCGGTTATGTTGCTGGACGTCTGAATATTGTTTCCTCTGCTGAGTCAAAGGGAATTGGCACATTTGTTGGTACATTTGCCCTGCCATCCTTAATATTCCTTTCATTAGCCAGAGTTGACTTCAGTACTGTAAATTGGACATTTCTGCTTGCCATTCTAGTGGCAAAAGGGATTGTGTTTTTTGCTGTGATTTTTATTACGTTATTAGTTTCAAAACCAACTCATCTAGGACGAGCTGGCATTTTTGCAATATTTTGTACTCAGAGTAATGATTTTGCATTGGGCTATCCCATTATAAGTGCTCTATATGCCCAAACCCACCCTGAATATGCCCTTTACCTATACCTGATGGCACCAATATCTCTGGCAATATTGAACCCTATTGCCTTTATTTTAATGGAGATTGATAAACAAAAAGGACAAAACCAGCAAGCTGACTCTCAAGCAAAGGGATTGCAAAGCTTGAAATTGTTGAAACAAATTCTCAAAGGGATTGTGTTTAATCCTGTGCTTTTAATGACTATTTTGGGGATGATTGGCAATGTCGCTTTTAAACATAAAATATCTATTTACATTGAAGGCTTGTTGGAGGTATTTGGTCAATCTTTCTCAGCAACTGCCTTGTTCCTTCTTGGCTTGCGTATGGTGGGACAAATACACAAATTAAAAGGGCCTGCCCTTGTGCTGCCCTGTGTATTGATTATGGTCAAATTAATTATTCTGCCAGTGGTCATGAGGGAATGTGTGAGCAGTCTCAATGCAGGAACGAATGAATCTGAGACAATTTCTTTGTCTACATATGCATTCCTGTATGGAACGATACCAACAGCACCAGCTGTGTTTGTTTTTTCTAGTTTATATCAGTTAGAAATTGATCTGATGGCTTCCTCAATGGTTATTTGCACATTTCTGTCTGGACCCATGATGTTCCTCTCAGCTGAACTCATATCAATAAACAAGGATTATGCTGCACAAATGAAAAAATTTGGTTTTGATTTATCAATAGTTGCACTTCTTTGCTGCTTGTGGGTGTTGATTGTTTTTGTTATTACAAAGAAACACAGAAGGATGCCACATAGATTAACAATATCTCTTCTTTTATCCCAGATACTTTTGGCCGTGAGTGTAATCTGGGGAGGACCACATAATACTTCTGCACCGTCTTTGAATGCAACGATCCAACAAGCATTTCTCTCTTTTAGCATGTACTCGTGTCTGCTATGGACTTCCATGCTCTCTGTCGGCATCCTTATGTTGCAGAGCCGTGGTCCGTGTTTTGTTGTGACATTGTGGCCAGTCTTGGGCTTCGTAGCTTGGGGAGCTCCCGCCGTGATGGTGACAGTCCTTCTCGCAACAAAATCTAGCACAGAGAATATTAACAGCCAAGCGACGGACGCAATAAGACTATGTTTATTAGTATTTTGCTTGACGGTTACAACCGGATGCCTGATTGTGTACATAAGATTGCGACGTCGAAGTGCGCTGTTCGCTTCTTTGTCCGCAGAAGCCACCACTAACTTTAGTCCTCCTGAAGAAACCAGTAGTCTTGTAGAGAATATGGAGCCTACGTCACAGGCACAGTCTGTATCTGGTGACACTAATGCAGCATTAGGTTGCTACGGCACCATAACTGCGTCTCCATCGCCCAGCCGACAGCCTAACGGATGCTGTTCTAACGATCCCGACTGTGAAAATGATCTCGCCGACTCAAATGATATCGAAGATCTTGGCAGTAACATCAGAGAGTGCGCGTGCCCGTCGTGGCGGCGTGCACCGGACGGCGCGTGCCCGCACTCGCGCGACGTGCAGCGCGCGGCGGCGGCGCTGGGCCTCCTGCCGCACGAGCTCGCGCGCGCCCGCACCGCGCAACTACTCAAGCACACCGTGCTCATCATCATCTACAGTCTCTCCATGTTTATTGGCATAACTTACACTACCTGGAGAATGATGTTGAAAGATGAAAGTGGTGTGTTCGTTGAAATCGAATTTCTGGACGTTGCTGCGAACTATGGACAAGGCTTGGTCCTGTTCATACTGTTTGGTGTTGATCCCGAAGAAATACTGGTCCCGACTTTAAGATATTTGAAAACTAAATGGTACGGAGCCGATACAGTGATTCTCCCGCCTATAGAGGATTTGAGTTTTGAAACGAAGCACGTCTGTGATCAGTTTATTTCACATCACCTGGACCGCTGCAGGGACGCTATTGCAAAAGATACTAGATGGCGCATGAGAACGTACCGCGGGGTCTTCAGGGGCTCGTGTCTTGTGAAATGGTTAATTGACTGCGGTCTCGCCAAAGACGAATATGAAGCGGTCACGTACGGACGACATTTGGTCGACGGTCGGCTCATAGCGCACGTGAGTGACGCTCATCACTTCACAAATTCACCAATGCTCTACGCTTTCAAGTAG
Protein
MEQIQLNLGDTTTDNLYPALFQCFTIIICGYVAGRLNIVSSAESKGIGTFVGTFALPSLIFLSLARVDFSTVNWTFLLAILVAKGIVFFAVIFITLLVSKPTHLGRAGIFAIFCTQSNDFALGYPIISALYAQTHPEYALYLYLMAPISLAILNPIAFILMEIDKQKGQNQQADSQAKGLQSLKLLKQILKGIVFNPVLLMTILGMIGNVAFKHKISIYIEGLLEVFGQSFSATALFLLGLRMVGQIHKLKGPALVLPCVLIMVKLIILPVVMRECVSSLNAGTNESETISLSTYAFLYGTIPTAPAVFVFSSLYQLEIDLMASSMVICTFLSGPMMFLSAELISINKDYAAQMKKFGFDLSIVALLCCLWVLIVFVITKKHRRMPHRLTISLLLSQILLAVSVIWGGPHNTSAPSLNATIQQAFLSFSMYSCLLWTSMLSVGILMLQSRGPCFVVTLWPVLGFVAWGAPAVMVTVLLATKSSTENINSQATDAIRLCLLVFCLTVTTGCLIVYIRLRRRSALFASLSAEATTNFSPPEETSSLVENMEPTSQAQSVSGDTNAALGCYGTITASPSPSRQPNGCCSNDPDCENDLADSNDIEDLGSNIRECACPSWRRAPDGACPHSRDVQRAAAALGLLPHELARARTAQLLKHTVLIIIYSLSMFIGITYTTWRMMLKDESGVFVEIEFLDVAANYGQGLVLFILFGVDPEEILVPTLRYLKTKWYGADTVILPPIEDLSFETKHVCDQFISHHLDRCRDAIAKDTRWRMRTYRGVFRGSCLVKWLIDCGLAKDEYEAVTYGRHLVDGRLIAHVSDAHHFTNSPMLYAFK

Summary

Keywords
Complete proteome   Glycoprotein   Membrane   Reference proteome   Transmembrane   Transmembrane helix  
Feature
chain  Integral membrane protein GPR155
EMBL
ODYU01011599    SOQ57441.1    AGBW02008593    OWR52968.1    KQ459590    KPI97450.1    + More
BABH01011928    BABH01011929    BABH01011930    GEZM01073505    JAV65042.1    GG694202    EFA13400.1    AAAB01008807    EAA04338.5    KB632366    ERL93645.1    APGK01052900    APGK01052901    KB741216    ENN72530.1    GFDF01007275    JAV06809.1    AJWK01017996    NEVH01011190    PNF32095.1    PNF32094.1    GFDF01007276    JAV06808.1    DS232614    EDS44101.1    CH940647    EDW69161.1    GDIQ01005816    JAN88921.1    GDIQ01089492    JAN05245.1    KRF84213.1    GDIP01016219    JAM87496.1    GDIP01094335    JAM09380.1    GDIP01045842    JAM57873.1    GDIP01137472    JAL66242.1    GDIP01044400    LRGB01000930    JAM59315.1    KZS14972.1    CH964095    EDW79008.2    GEZM01073507    JAV65041.1    GL732527    EFX87600.1    GDIQ01072585    JAN22152.1    CM000159    KRK01996.1    EDW94699.2    CM002912    KMZ00278.1    CM000363    EDX10877.1    KMZ00276.1    LJIJ01000696    ODM95218.1    LNIX01000003    OXA58796.1    JH431701    KMZ00279.1    KMZ00277.1    GDIP01137473    JAL66241.1    KB202793    ESO88023.1    JR039226    AEY58591.1    GDIP01215715    JAJ07687.1    GDIP01106331    JAL97383.1    KK544259    KFP31828.1    KL286072    KFZ68687.1    KL392843    KFP92252.1    AADN05000350    KL216953    KFV72139.1    KK511065    KFP63105.1    AWGT02000091    OXB78000.1    LSYS01004331    OPJ80083.1    ADON01074302    KK501765    KFP17590.1    KK649318    KFQ00863.1    KL224607    KFW61880.1    KL672766    KFW86895.1    GBEW01000461    JAI09904.1    KL206671    KFV84861.1    AKCR02000010    PKK29436.1    KK412001    KFQ84303.1    GAEP01000747    JAB54074.1    AGTO01020688    IACI01069742    LAA27077.1    KK687809    KFQ15316.1    AK056381    AK091200    AK096665    AK315125    BX537947    AL834154    AC010894    AC018470    CH471058    BC028730    BC035037    AY255528    KL446017    KFW95439.1    KL226022    KFM07040.1    NDHI03003413    PNJ59982.1    PNJ59983.1    PNJ59984.1    KK836992    KFP80352.1    CABD030017110   
Pfam
PF03547   Mem_trans        + More
PF00610   DEP
Interpro
IPR000591   DEP_dom        + More
IPR004776   Mem_trans       
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR037368   GPR155_DEP       
IPR036259   MFS_trans_sf       
IPR017981   GPCR_2-like       
SUPFAM
SSF46785   SSF46785        + More
SSF103473   SSF103473       
Gene 3D

Ontologies

Topology

Subcellular location
Membrane  
Length:
832
Number of predicted TMHs:
16
Exp number of AAs in TMHs:
349.442989999999
Exp number, first 60 AAs:
35.21418
Total prob of N-in:
0.11337
POSSIBLE N-term signal
sequence
outside
1  -  14
TMhelix
15  -  34
inside
35  -  45
TMhelix
46  -  65
outside
66  -  74
TMhelix
75  -  97
inside
98  -  108
TMhelix
109  -  131
outside
132  -  140
TMhelix
141  -  163
inside
164  -  191
TMhelix
192  -  211
outside
212  -  225
TMhelix
226  -  245
inside
246  -  251
TMhelix
252  -  274
outside
275  -  288
TMhelix
289  -  311
inside
312  -  323
TMhelix
324  -  346
outside
347  -  360
TMhelix
361  -  378
inside
379  -  390
TMhelix
391  -  408
outside
409  -  422
TMhelix
423  -  445
inside
446  -  457
TMhelix
458  -  480
outside
481  -  494
TMhelix
495  -  517
inside
518  -  655
TMhelix
656  -  675
outside
676  -  832
 
 

Population Genetic Test Statistics

Pi
240.08
Theta
179.51957
Tajima's D
0.472384
CLR
0.324628
CSRT
0.508174591270437
Interpretation
Uncertain
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