SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06697  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011731
Annotation
cuticular_protein_hypothetical_8_precursor_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.994
 

Sequence

CDS
ATGGTGGTGTTGTTCGCTCTCGCCTCTGTGGCTTGCGGCTCCTTTTTGCCGGTGGCGCAGCCCCCGCATCATCCCGCTGTCGTCCTGGACCCCCACGGCCGGCCTCTGGACACCGCGGAAGTCATCAACGCTCGCGCTCTCCACCTTCAAGCTAAAGTATTGGAAGGACACCACGCCCCACTCGTGCACGCTGCTGTCGCGCCGATTGTAGCTCCTATCGCTCACTCCGTCATCGCTCCTGCTGCCGTCTCTCATCAATCTCGTGTTGATGTACGTACCAGCCCCGCCATCTATAGCCACGCTGTTGCCGCACCAGTCCTCGCACACGCCGCCTACGCTGCACCAGTATTTGCTGGTCACGGTCATGGACACTGGCTGAAAAAACGTTCCCTGGGTCACTTGACTTACAGTGCTCCCATCATCGCTCCAGCTGCGGTTTCTCACCAGTCCCGCGTGGATGTGATCTCTAGCCCGGCAGTCGTGTCCCATGCAGTCGCTACTCCCGTCGTAGCTCACGCCTATGCTGCCCCCGTGGTCGCTGCAGTAGCCCCAGCGGCCGTGTCTCATCAGTCCCGCGTGGATGTCCGCACTAGCCCCGCTGTAGTAGCACATGGAGCGGTCGCACCATACGCGCACGGAATCATCACTCCTTATGCCCATCATGCTGGACTCTTCCATTCCGCCCCCTTGGTACACTCCAGCCCCCTGGTTCACGGTTGGTGA
Protein
MVVLFALASVACGSFLPVAQPPHHPAVVLDPHGRPLDTAEVINARALHLQAKVLEGHHAPLVHAAVAPIVAPIAHSVIAPAAVSHQSRVDVRTSPAIYSHAVAAPVLAHAAYAAPVFAGHGHGHWLKKRSLGHLTYSAPIIAPAAVSHQSRVDVISSPAVVSHAVATPVVAHAYAAPVVAAVAPAAVSHQSRVDVRTSPAVVAHGAVAPYAHGIITPYAHHAGLFHSAPLVHSSPLVHGW

Summary

Pfam
PF00089   Trypsin
Interpro
IPR007614   Retinin_C        + More
IPR001254   Trypsin_dom       
IPR001314   Peptidase_S1A       
IPR009003   Peptidase_S1_PA       
SUPFAM
SSF50494   SSF50494       

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.703888
 
 
Length:
240
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
71.19148
Exp number, first 60 AAs:
11.4381
Total prob of N-in:
0.61316
POSSIBLE N-term signal
sequence
outside
1  -  240
 
 

Population Genetic Test Statistics

Pi
200.052521
Theta
189.880268
Tajima's D
0.182372
CLR
0
CSRT
0.421178941052947
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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