Silkworm Genome Informatics Database

Gene

KWMTBOMO06695

Pre Gene Modal

BGIBMGA011730

Annotation

cuticular_protein_hypothetical_10_precursor_[Bombyx_mori]

Location

Bomo_Chr11(+):12667781-12668405 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 1.729

CDS

ATGCAATTACGTATAAAAGCGACATCGTCCACATCTGTGCATCAGTTGTTGAGAATTACACACGCAACACAGACCACTTACAGAATGATGAAGCTGGTGGTGTTGTCCTGCATGTTGGCGGCCGTATATGGCGGACCCGTGGCGCCCATCACCTACACTGCACCGCCTGCATACATCGCACCGTTGATCGCGCTTTTCGGCAACTACAGAGGGCCGCTGTCCCTTGCCCCCGGCCAGCCCGCCAACGTCCTCGGCGCCGACGGCAGGCCCCTCGACACTCTCGACGTTAACTTGGACCGCGCGGCGCACTACACCAGCAAAGCTCTCGGCGTCCACCTGTTGAAGAAGCGCTCTGCCGTCATCGCACCCATCAGCACTGTCGCCGTCGCACACTCACCACTGATCACCCCGGTCGCTCACATCGCCTACAGCGCTCCCCTCGCTACTGCCCACTATGCGCCTCTAACCTACGCTGCTCGCCCCATTGTGCACTGGTAG

Protein

MQLRIKATSSTSVHQLLRITHATQTTYRMMKLVVLSCMLAAVYGGPVAPITYTAPPAYIAPLIALFGNYRGPLSLAPGQPANVLGADGRPLDTLDVNLDRAAHYTSKALGVHLLKKRSAVIAPISTVAVAHSPLITPVAHIAYSAPLATAHYAPLTYAARPIVHW

Uniprot

C0H6G6 C0H6G7 G8FVQ4 A0A194RHM5 A0A212FGE6 A0A2A4JEP2 + More
B2DBM4 A0A2A4JFV3 A0A2A4JFA9 A0A194RGW3 Q9U504 A0A194PXE7 A0A194Q202 A0A194RG83 A0A212FGD8 A0A194PVL8

Pubmed

19121390 19280704 26354079 22118469 18712529 10620045 + More

EMBL

BABH01011946 BR000465 FAA00477.1 BABH01011947 BR000466 FAA00478.1 + More
JN082724 AER27821.1 KQ460205 KPJ16825.1 AGBW02008684 OWR52797.1 NWSH01001735 PCG70289.1 AB264708 BAG30783.1 PCG70282.1 NWSH01001803 PCG70082.1 KPJ16827.1 AF117584 AAF16706.1 KQ459590 KPI97434.1 KPI97435.1 KPJ16828.1 OWR52798.1 KPI97436.1

Proteomes

UP000005204 UP000053240 UP000007151 UP000218220 UP000053268

ProteinModelPortal

C0H6G6 C0H6G7 G8FVQ4 A0A194RHM5 A0A212FGE6 A0A2A4JEP2 + More
B2DBM4 A0A2A4JFV3 A0A2A4JFA9 A0A194RGW3 Q9U504 A0A194PXE7 A0A194Q202 A0A194RG83 A0A212FGD8 A0A194PVL8

KEGG

100379486 no KO assigned | (RefSeq) CPH10, BmorCPH10; cuticular protein hypothetical 10

GO

Length:

165

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

27.86783

Exp number, first 60 AAs:

22.8458

Total prob of N-in:

0.99504

POSSIBLE N-term signal

sequence

inside

1 - 31

TMhelix

32 - 54

outside

55 - 165

Pi

175.716416

Theta

155.686913

Tajima's D

0.404502

CLR

0

CSRT

0.487775611219439

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree