Gene

KWMTBOMO06694

Pre Gene Modal

BGIBMGA011729

Annotation

cuticular_protein_hypothetical_11_precursor_[Bombyx_mori]

Location

Bomo_Chr11(+):12658471-12659051      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.592

CDS

ATGCATCAGTTGTTGAGAATTACACACGCAACACAGACCACTTACAGAATGATGAAGCTGGTGGTGTTGTCCTGCATGTTGGCGGCCGTATATGGCGGACTCGTGGCGCCCATCGCCTACACCGCACCGCTTGCATACACCGCACCGTTGATCGCGCCCTTGGGCAACTACAGAGGGCCGCTGTCCCTTGCCCCCGGCCAGCCCGCCAACGTCCTCGGCGCTGACGGCAGGCCCCTCGACACTCTCGAAGTTAACTTGGACCGCGCGGCGCACTACACCAGCAAAGCTCTCGGCGTCCACCTGTTGAAGAAGCGCTCTGCCGTCATCGCACCCATCAGCACCGTCGCCGTCGCACACTCACCACTGATCACCCCGGCCGCTCACATCGCCTACAGCGCTCCCCTCGCTACTGCCCACTATGCGCCTCTAACCTACGCCGCTGGCCCCATTGTGCACTGGTAG

Protein

MHQLLRITHATQTTYRMMKLVVLSCMLAAVYGGLVAPIAYTAPLAYTAPLIAPLGNYRGPLSLAPGQPANVLGADGRPLDTLEVNLDRAAHYTSKALGVHLLKKRSAVIAPISTVAVAHSPLITPAAHIAYSAPLATAHYAPLTYAAGPIVHW

Uniprot

C0H6G7   C0H6G6   G8FVQ4   A0A194RHM5   A0A2A4JEP2   A0A212FGE6   + More
B2DBM4   A0A2A4JFV3   A0A2A4JFA9   A0A2H1V1N0   A0A194PXE7   A0A2H1V300   A0A194RGW3   Q9U504   A0A194RLG6   A0A194RG83   A0A194Q202   A0A212FGD3   A0A0L7LGP4   A0A194RHA6   A0A194PVT0   C0H6G5   A0A212FGD8   A0A194PVT5   A0A194PVL8   I4DJ92   A0A2A4JFE2   A0A2H1WZQ6   A0A194PWN8   A0A194PXE2   C0H6H1   C0H6H0   A0A194RGV8   A0A0L7K2H4   A0A0L7LGS8   A0A2A4JDY7  

Pubmed

19121390    19280704    26354079    22118469    18712529    10620045    + More
26227816    22651552   

EMBL

BABH01011947    BR000466    FAA00478.1    BABH01011946    BR000465    FAA00477.1    + More
JN082724    AER27821.1    KQ460205    KPJ16825.1    NWSH01001735    PCG70289.1    AGBW02008684    OWR52797.1    AB264708    BAG30783.1    PCG70282.1    NWSH01001803    PCG70082.1    ODYU01000274    SOQ34753.1    KQ459590    KPI97434.1    SOQ34752.1    KPJ16827.1    AF117584    AAF16706.1    KPJ16826.1    KPJ16828.1    KPI97435.1    OWR52796.1    JTDY01001193    KOB74590.1    KPJ16824.1    KPI97432.1    BABH01011945    BR000464    FAA00476.1    OWR52798.1    KPI97437.1    KPI97436.1    AK401360    BAM17982.1    PCG70294.1    ODYU01012333    SOQ58590.1    KPI97428.1    KPI97429.1    BABH01011948    BR000470    FAA00482.1    BR000469    FAA00481.1    KPJ16822.1    JTDY01016667    KOB51883.1    KOB74589.1    PCG70295.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000007151    UP000053268    UP000037510    + More

PRIDE

C0H6G5   

ProteinModelPortal

C0H6G7   C0H6G6   G8FVQ4   A0A194RHM5   A0A2A4JEP2   A0A212FGE6   + More
B2DBM4   A0A2A4JFV3   A0A2A4JFA9   A0A2H1V1N0   A0A194PXE7   A0A2H1V300   A0A194RGW3   Q9U504   A0A194RLG6   A0A194RG83   A0A194Q202   A0A212FGD3   A0A0L7LGP4   A0A194RHA6   A0A194PVT0   C0H6G5   A0A212FGD8   A0A194PVT5   A0A194PVL8   I4DJ92   A0A2A4JFE2   A0A2H1WZQ6   A0A194PWN8   A0A194PXE2   C0H6H1   C0H6H0   A0A194RGV8   A0A0L7K2H4   A0A0L7LGS8   A0A2A4JDY7  

KEGG

100379485    no KO assigned | (RefSeq) CPH11, BmorCPH11; cuticular protein hypothetical 11

GO

GO:0016021  

Length:

153

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

26.47565

Exp number, first 60 AAs:

22.9736

Total prob of N-in:

0.99870

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  153

 

 

Pi

195.62058

Theta

208.462033

Tajima's D

-0.160538

CLR

0

CSRT

0.328283585820709

Interpretation

Uncertain