SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06693
Pre Gene Modal
BGIBMGA011728
Annotation
cuticular_protein_hypothetical_12_precursor_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.654
 

Sequence

CDS
ATGTTCAAGTTGATAGTGTGTGCTTTATTAGCTGTCGCGGCTGCTGAGCCTGGAGTCTTCCTGACGCCTCCCGTGACGTCCCTAACAACTGTGGTTTCTCCGGGATCTACAACCATCAGTAAGCTGGCCAGCAGCGTCGTGCATCCCTCACCCTTGGTCTACTCTACACCGTATGGCTACACTCATTTCATCAAGAAGCGGTCTGCTCCCTTAGCGCATGCTGCGTATATCGCTCCTGTAGCATACTCTGCTATTTCTCCCGTCGTAGCAACCACCTACCACGGTAAAACTCCTCTCCTGGCTTCGACCTCCTACGTTTCTTCGACTCCTTTAATCTCGCAACCTATTGCGTATTCCGCTCACTTTATCAAGAAGCGCTCTCCACAATGGCCCGTGAGCTACATCGCTCCTAGCTCCTACATCACTCCCAACACCTACATCGCAAGTGGCCCTCTTGGAGCCACTACCTACACGACACCCTTCGTGCAGACCGTGCCGATCGCATCGACTGCATCACTTCCCGTCGCAACTCATCTGATCAAGAAGAGGTCTGCACCCGTTCTGGCCACAACTTACACCGCACCTACTACTTACACCGCTGCTCTGCCAGGAGTTTTTTCTCATCAATCCAACTACAATTTGCACGGCGCTCCTCTTGTTACATCTTACACACCTCTGGTGTACTCTGCTCCAATTTCAACTCATGTTATTTAA
Protein
MFKLIVCALLAVAAAEPGVFLTPPVTSLTTVVSPGSTTISKLASSVVHPSPLVYSTPYGYTHFIKKRSAPLAHAAYIAPVAYSAISPVVATTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPVLATTYTAPTTYTAALPGVFSHQSNYNLHGAPLVTSYTPLVYSAPISTHVI

Summary

Ontologies

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.994626
 
 
Length:
237
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
8.44715000000001
Exp number, first 60 AAs:
2.80279
Total prob of N-in:
0.17801
outside
1  -  237
 
 

Population Genetic Test Statistics

Pi
183.510764
Theta
172.822888
Tajima's D
0.19454
CLR
0.004978
CSRT
0.424078796060197
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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