SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06692
Pre Gene Modal
BGIBMGA011760
Annotation
cuticular_protein_hypothetical_13_precursor_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.453
 

Sequence

CDS
ATGTTCAAGTTGATAGTGTGTGCTTTATTAGCTGTCGCGGCTGCTGAGCCTGGAGTCTTCTTGACGCCTCCCGTGACGTCCCTAACAACTGTGGTTTCTCCGGGATCTACAACTATCAGTAAGCTGGCCAGCAGCGTCGTGCATCCCTCACCCTTGGTCTACTCTACACCGTATGGCTACACTCATTTCATCAAGAAGAGGTCTGCTGCACATGCTGCGTATATCGCTCCTGCATCATACTCTGCTATTTCTCCCGTCGTAGCAACCACCTACCACGGTAAAACTCCTCTCCTGGCTTCGACCTCCTACGTTTCTTCGATTCCTTTAATCTCGCAACCTATTGCGTATTCTGCTCATTTTATCAAGAAGCGCTCTCCACAATGGCCCGTGAGCTACATCGCTCCTAGCTCCTACATCACTCCCAACACCTACATCGCAAGTGGCCCTCTTGGAGCCACTACCTACACGACACCCTTCGTGCAGACCGTGCCGATCGCATCGACTGCATCACTTCCCGTCGCAGCTCATCTGATCAAGAAGAGGTCTGCCCCCGTGCTGGCGACAACTTACACCGTACCTACTACTTACACCGCTGCTCTCCCAGGAGTTTTCTCTCATCAGTCCAGCTACAATTTGCACGGCGCTCCTCTTGTTACATCTTACACGACACCTCTGGTGTACTCTGCTCCTATTTCAACTCACGTCGTTTAA
Protein
MFKLIVCALLAVAAAEPGVFLTPPVTSLTTVVSPGSTTISKLASSVVHPSPLVYSTPYGYTHFIKKRSAAHAAYIAPASYSAISPVVATTYHGKTPLLASTSYVSSIPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVAAHLIKKRSAPVLATTYTVPTTYTAALPGVFSHQSSYNLHGAPLVTSYTTPLVYSAPISTHVV

Summary

Ontologies

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.993989
 
 
Length:
236
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.56646
Exp number, first 60 AAs:
1.56495
Total prob of N-in:
0.10145
outside
1  -  236
 
 

Population Genetic Test Statistics

Pi
204.363531
Theta
175.305791
Tajima's D
0.437116
CLR
22.645654
CSRT
0.489325533723314
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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