SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06688  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011725
Annotation
cuticular_protein_hypothetical_16_precursor_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.918
 

Sequence

CDS
ATGAACTCGCTGGTGGTGTTATTATCTTTGGCAGCGTTAGCCGCCGCCAAGCCCTCAGGCCTTCTTACGGGTCCCGCAATCACCTACTCTGCCCCGCTGATCGCAGCTGTCCCGGCAGCCGTATCTCACCAATCTCGATTGGACATCAAATCATCTCCAGCCATCGTATCAACTGCAGCCGTAGCTCCGATCGCCGTCCGCACCGCCTTAGCTCAACCGACTGTCTTCGCTGCACCAGCAGCTGTCGTTGCCCCCGCAGCCGTCTCCAGCCAGTCGCGTCTTGACATCAAGTCTACTCCGGCCGTTACCAGTACGTTAGTTTCTGGTGCTCCTCTGGCGTACAGTGCAATCAGTGCCCCAATCACCACTGCTGCAATTACACCTCTTGCTGCAACGGCCATCGCACCTGCTCTTCTGAATACATTTACACCTGCTATTGCGGCACCCTCTTTTGTTAAGACCGCTCAGCTAGTACCGGCCGCAATCGAAGCACCAGCAGTCCCTCTTGACACTCCAGAAGTGGTCGCTGCTCGCGCCGCTCACCTGGAAGCTAAAGCTCAGGCTCTCGCTGACGCTCATGTAGTCCACAAGCGTTCAGTTGTTGCTTCAGTGTACTCCACTTCTTTGGGTGCTCCAGTGGTATCGACATACTCAGCAGCTCCTGTTGTCTCCACCCACCTCACATACTCTGCTCCTATCGTCACTCCCCTTGTAACGAAGACTTATGGAATTCATACTTGGTAA
Protein
MNSLVVLLSLAALAAAKPSGLLTGPAITYSAPLIAAVPAAVSHQSRLDIKSSPAIVSTAAVAPIAVRTALAQPTVFAAPAAVVAPAAVSSQSRLDIKSTPAVTSTLVSGAPLAYSAISAPITTAAITPLAATAIAPALLNTFTPAIAAPSFVKTAQLVPAAIEAPAVPLDTPEVVAARAAHLEAKAQALADAHVVHKRSVVASVYSTSLGAPVVSTYSAAPVVSTHLTYSAPIVTPLVTKTYGIHTW

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.950234
 
 
Length:
247
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
25.28155
Exp number, first 60 AAs:
11.30368
Total prob of N-in:
0.19219
POSSIBLE N-term signal
sequence
outside
1  -  247
 
 

Population Genetic Test Statistics

Pi
181.042236
Theta
182.08049
Tajima's D
-0.462439
CLR
182.157585
CSRT
0.245287735613219
Interpretation
Uncertain
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