SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06686
Annotation
cuticular_protein_hypothetical_18_precursor_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.979
 

Sequence

CDS
ATGTTCGCCAAATTTGTTATCATTCTAACTCTTGCCGTCGCTGCCGCCAACGCGAGTGCTCCTGCTGCACTGGTCGCTCCAGCAGTAGCTCCTGCTGCGTATGTAGCGCCGTACGCCAGTTCCTACTCAGCCCACGCGGTTAACCATGCCGTTGCCACACCAGTCATAGCTCCAGCTCCTTATGTAGCAGCCCCTGCGGCTCCAGTGTTGGCTTCAGCTCCATATGTGGCCGCACCTGCTGCTCCTTTAGTCGCCCCAGCGTCTCCTTTCTTCGGCAGATACGTTTCTTCCCCTTACATCTTCTAA
Protein
MFAKFVIILTLAVAAANASAPAALVAPAVAPAAYVAPYASSYSAHAVNHAVATPVIAPAPYVAAPAAPVLASAPYVAAPAAPLVAPASPFFGRYVSSPYIF

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.975211
 
 
Length:
101
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
40.19708
Exp number, first 60 AAs:
26.39782
Total prob of N-in:
0.89515
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  101
 
 

Population Genetic Test Statistics

Pi
360.780623
Theta
236.869947
Tajima's D
1.647607
CLR
0
CSRT
0.818309084545773
Interpretation
Uncertain
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