SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06684  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011721
Annotation
cuticular_protein_hypothetical_21_precursor_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.995
 

Sequence

CDS
ATGTACAAAATCGTATTTTTCCTCGCCACCGTCGCATTGGCGTCAGCCAAACCCAGCGCCATCGTGGCAGCTCCAGCACCTCTGGTGGCAGCTTCAGCGCCTCTGTTAGCGGCCCCAGCACCCCTTGTAGCAGCCCCCGCTCCGGTCGTCACTGCCACAAGCTCCCAGTACGTTTCTAGAAACTTCAACGGTCTAGTTGCTGCCGCTGCTCCTTTGGTAGCTGCCCCTGCTTCATACAGCTTCGCTCCAGCTGCCAGACTAGTAGCCCCAGCGGCAGCACCGTACGTAGCTGCAGCTGCTCCGGTTGTTCCTACATACGCTCGCTACGCAGCTCCTTATGCAGCATCGCCGTATATTGCGGCTTCTGCTCCTTACATCGCAGCACCCTATGCTTCTGCTCCTTACATCGCAGCACCCTATGCTTCTGCTCCATTCGTCGCCCTCAAGTGA
Protein
MYKIVFFLATVALASAKPSAIVAAPAPLVAASAPLLAAPAPLVAAPAPVVTATSSQYVSRNFNGLVAAAAPLVAAPASYSFAPAARLVAPAAAPYVAAAAPVVPTYARYAAPYAASPYIAASAPYIAAPYASAPYIAAPYASAPFVALK

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.954438
 
 
Length:
149
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
82.00098
Exp number, first 60 AAs:
31.68469
Total prob of N-in:
0.81378
POSSIBLE N-term signal
sequence
outside
1  -  149
 
 

Population Genetic Test Statistics

Pi
173.171026
Theta
175.145941
Tajima's D
-0.072596
CLR
0.513269
CSRT
0.348182590870456
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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