SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06682
Annotation
cuticular_protein_hypothetical_23_precursor_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.88
 

Sequence

CDS
ATGATGAAAATTATCTTAGTCATCTCTGCGCTGGTCGCCATCGCCGCGGCCAAGCCGACACTTTTAAGCGCACCATTGGTGGCGGCACCTGCAGTGGTAACCGCAACAAGCTCTCAGTACTACCATCGCATCAACAACGGATTAGCTGCATACGTTGCTGCCCCTGCCGCTTATGTCGCACCGGCGGTCGCTTCAGCTGCCTATGTCGCTCCATCTGCCCCTTTGGTAGCTTCGGCCCCCTATCTCGCTGCCCCTGCCGGCTATGTTGCCGTTTAA
Protein
MMKIILVISALVAIAAAKPTLLSAPLVAAPAVVTATSSQYYHRINNGLAAYVAAPAAYVAPAVASAAYVAPSAPLVASAPYLAAPAGYVAV

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.960394
 
 
Length:
91
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
46.4316
Exp number, first 60 AAs:
35.88685
Total prob of N-in:
0.28291
POSSIBLE N-term signal
sequence
outside
1  -  4
TMhelix
5  -  27
inside
28  -  47
TMhelix
48  -  70
outside
71  -  91
 
 

Population Genetic Test Statistics

Pi
159.264834
Theta
171.132312
Tajima's D
-0.218136
CLR
0.210791
CSRT
0.310584470776461
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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