Gene

KWMTBOMO06679

Annotation

PREDICTED:_pupal_cuticle_protein_C1B-like_[Bombyx_mori]

Location

Bomo_Chr11(-):12555802-12556470 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.235 Nuclear Reliability : 1.022

Sequence

CDS

ATGTTCAAATTGTTCATCTTCGCTTGCTTCCTGGCCTTCGCCGCGGCTAAGCCCAGCGTCCTTCTCAGCTCGTACACGGCTCCCGTCGCATACACCGCGCCCGTCGCGGCTGCCTACACCGCTCCGCTGGCCTACTCAGCCTACACCGCACCAGTAGCAGCCTACTCCGCCTACACATACGCATCACCCTACGCCGCTTACTACCTTCGACGTTAA

Protein

MFKLFIFACFLAFAAAKPSVLLSSYTAPVAYTAPVAAAYTAPLAYSAYTAPVAAYSAYTYASPYAAYYLRR

Summary

Uniprot

ProteinModelPortal

Ontologies

KEGG

101735485 no KO assigned | (RefSeq) pupal cuticle protein C1B-like

Topology

SignalP

Position: 1 - 16, Likelihood: 0.985659

Length:

Number of predicted TMHs:

Exp number of AAs in TMHs:

44.25576

Exp number, first 60 AAs:

38.53078

Total prob of N-in:

0.89942

POSSIBLE N-term signal

sequence

inside

1 - 4

TMhelix

5 - 27

outside

28 - 46

TMhelix

47 - 69

inside

70 - 71

Population Genetic Test Statistics

138.340787

Theta

130.197034

Tajima's D

0.141001

CLR

0.230461

CSRT

0.407679616019199

Interpretation

Uncertain