SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06674
Pre Gene Modal
BGIBMGA011766
Annotation
cuticular_protein_hypothetical_25_precursor_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.219 PlasmaMembrane   Reliability : 1.835
 

Sequence

CDS
ATGTTCAAGCTGATTCTTGTTACCCTCGCCACTGTGGCGCTTGCCTCTGGCAAACCCAGCTTTGGACACGCTCCTCTAGCCTACAGTGCTCCTGTCGCCACCTACTCATACAGCGCTCCAGCCTTCTCTAGCGCAGCTATTGCTGCCCCCGCTGTTGCTGCACCCGCTCTCACCACCTCCGTTGCTGCTCCTGCTGTTGCGCACCAAATCCAGACACCAGCCGTCCATGTACCAGCCGTCCACGCACCAGCCGTCCACGCACCAGCCGTCCACGTACCAGCCGTCCACGCACCAGCCGTCTCCGCTCCAGTTGTAGCTGCTCCCGCCGTCACCGCTCCCGTCGTAGCGGCTCCAGCGTACACTGCCACGGCCTACACCGCCCCAGCCTACACCGCCCCAGCCTACACTGCCCCAGCCTACACCGCCCCAGCTTACACCGCCCCAACATATACTGCCCCGGTTTACGCTGCCCGTACATACGCCGCCCCAACTTACGCTGCCGCATATACTGCCCCAGCGTACACTGCTCCAGCCGTGACCACCGCTGCCCTTGCTGCTCCAGCATACACTGCTCCAGCCGTGACTACCGCCGCCGTCGCTGCCCCAGCGTATACCCCTCTTGCCTACTCAACTTACGGAGCTTCAGCTGCCTACCCTTTGTCGTCCTACGGAGCCTACTCGTACCCTAGCTACTACTCCAACTACGCTGCGTACTCTCCCCTGACCTACAGCAGCTACTGGAGCCCCGCTTCCCTCTACTACAAGAAGAAGTGA
Protein
MFKLILVTLATVALASGKPSFGHAPLAYSAPVATYSYSAPAFSSAAIAAPAVAAPALTTSVAAPAVAHQIQTPAVHVPAVHAPAVHAPAVHVPAVHAPAVSAPVVAAPAVTAPVVAAPAYTATAYTAPAYTAPAYTAPAYTAPAYTAPTYTAPVYAARTYAAPTYAAAYTAPAYTAPAVTTAALAAPAYTAPAVTTAAVAAPAYTPLAYSTYGASAAYPLSSYGAYSYPSYYSNYAAYSPLTYSSYWSPASLYYKKK

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.982991
 
 
Length:
257
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
31.19605
Exp number, first 60 AAs:
8.10684
Total prob of N-in:
0.24498
outside
1  -  257
 
 

Population Genetic Test Statistics

Pi
282.389315
Theta
180.357565
Tajima's D
1.775777
CLR
86.608311
CSRT
0.847457627118644
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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