SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06673  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014292
Annotation
cuticular_protein_hypothetical_34_precursor_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.264 PlasmaMembrane   Reliability : 1.771
 

Sequence

CDS
ATGTTCAAGCTGATTCTTGTTACCCTCGCCACTGTGGCGCTTGCCTCTGGCAAACCCAGCTTTGGATACGCTCCTCTAGCCTACAGTGCTCCTATCGCCGCCACCTACTCATACAGCGCCCCAGCCTTCTCTAGCGCAGCTATTGCTGCCCCCGCTGTTGCTGCACCCGCTCTCACCTCCGTTGCTGCTCCTGCTGTTGCGCACCAAATCCACACACCAGCCGTCCATGTACCAGCCGTCCACGCACCAGCCGTCCCCGCACCAGCCGTCCACGCACCAGCCGTCTCCGCTCCAGTTGTTGCTGCTCCCGCCGTCACCGCTCCCGTCGTCGCCGCTCCAGCGTACACTGCCACGGCCTACACCGCCCCAGCCTACACCGCCCCAGCCTACACGGCCCCAGCCTACACTGCCCCAGCCTACACCGCCCCAGCTTACACCGCCCGAACTTACGCAGCCCCAGTATACACCGCCCCAGCATATACTGCCCCGGTTTACGCTGCCCGTACATACGCCGCCCCAACTTACGCTGCCGCATATACCGCCCCAGCGTACACTGCTCCAGCCGTGACCACCGCTGCCCTTGCTGCTCCAGTATACACTGCTCCAGCCGTGACTACCGCCGCCGTGGCCGCCCCAGCATATACTACCCCTCTTGCCTACTCAACTTACGGAGCTTCAGCTGCCTACCCCGTGTCGTCCTACGGAGCCTACTCGTACCCTAGCTACTACTCCAACTACGCTGCGTACTCTCCCCTGACCTACAGCAGCTACTGGAGCCCCGCTTCCCTCTACTACAAGAAGAAGTGA
Protein
MFKLILVTLATVALASGKPSFGYAPLAYSAPIAATYSYSAPAFSSAAIAAPAVAAPALTSVAAPAVAHQIHTPAVHVPAVHAPAVPAPAVHAPAVSAPVVAAPAVTAPVVAAPAYTATAYTAPAYTAPAYTAPAYTAPAYTAPAYTARTYAAPVYTAPAYTAPVYAARTYAAPTYAAAYTAPAYTAPAVTTAALAAPVYTAPAVTTAAVAAPAYTTPLAYSTYGASAAYPVSSYGAYSYPSYYSNYAAYSPLTYSSYWSPASLYYKKK

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.980865
 
 
Length:
268
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
62.86883
Exp number, first 60 AAs:
21.74301
Total prob of N-in:
0.42431
POSSIBLE N-term signal
sequence
outside
1  -  268
 
 

Population Genetic Test Statistics

Pi
161.784072
Theta
167.367536
Tajima's D
-0.141859
CLR
30.187822
CSRT
0.333233338333083
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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