SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06671
Pre Gene Modal
BGIBMGA014293
Annotation
cuticular_protein_hypothetical_26_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.03 Nuclear   Reliability : 1.032 PlasmaMembrane   Reliability : 1.394
 

Sequence

CDS
ATGTTCAAACAGATTCTTGTCGCCTTCGCCACATTGGCCATCGCTTATGGTAAGCCCGGCTTGGGACACTTCGGCTACTCCCCAGTTGCCAGCTACGCATCCTACCTGCCTTCGACTTATGCCTACGGTGCCCCGGCCCTCGCCGCCCCAGCTGTAGCTCCAGTTCGAGCTCTGACCACTGCTGCCGTTGCTGCTCCAGCATACACCGCCCCTCTTGCATACTCTGCTTACTCACCAGCTGCCTACCCTCTGTCGTCCTACGCTCCCTACTCATACCCCAGCTACTACAATGGTTACTCTAGCTACGCTGGATACTCTCCCTTGACCTATAGCAGCTACTGGAACCCTGAATCCATCTACTACAAGCGCAAGTGA
Protein
MFKQILVAFATLAIAYGKPGLGHFGYSPVASYASYLPSTYAYGAPALAAPAVAPVRALTTAAVAAPAYTAPLAYSAYSPAAYPLSSYAPYSYPSYYNGYSSYAGYSPLTYSSYWNPESIYYKRK

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.944475
 
 
Length:
124
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
36.49851
Exp number, first 60 AAs:
28.09161
Total prob of N-in:
0.74119
POSSIBLE N-term signal
sequence
outside
1  -  124
 
 

Population Genetic Test Statistics

Pi
128.289893
Theta
163.327682
Tajima's D
-0.332182
CLR
154.85601
CSRT
0.28373581320934
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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