Gene

KWMTBOMO06664  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011770

Annotation

G_protein_pathway_suppressor_1_[Bombyx_mori]

Location

Bomo_Chr11(-):12365066-12367600      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.253

CDS

ATGAACACAGCTGAACCAATGCAGGTTGATATTCCCCCAGAAGATAATGAAAACAATGAGACGGAATGCTACGTCGTTGAAAACCCCACCTTGGATTTGGAAACATACGCTGCGTCATATACTGGTTTTGCAAAACTTTATAGGCTCATGTTTGTAGCAGACCACTGTCCGTCATTGCGATTGGAAGCTTTGAAAATGGCCATATCCTATGTCATGACCACATATAACGTAAATCTGTATCACACACTGCATAAAAAACTCTCAGAAGCAGTGGCATCAGCAGGACTGCCTGATATAGCAGGTTCTCAAGATATTCCAGTCTTAGATACTATTTGGGTAGAATCAAAAACAAAAAAAGCTGCCATAAAACTGGAAAAGCTAGATACTGATTTGAAAAATTATAAAACAAATTCAATCAAAGAAAGTATCAGAAGAGGCCATGATGATTTGGGTGACCATTATCTAGATTGTGGAGATCTCACCAGTGCCTTGAAATGCTACTCGAGAGCTAGAGATTACTGCACAAGTGGAAAACATCTTGTCATGATGTGCTTGAATGTAGTTAAAGTTTCAGTATATCTTCAAAATTGGGCTCATGTTCTAAATTATGTATCTAAAGCTGAAGCGACCCCAGACTTTAATGAAATTCCCGGAAAAGACAGCAACCAGTCAATTTTAACTCGTTTAAAATGTGCAGCAGGATTAGCCGAGCTGGCAACGAAAAAGTATAAATCTGCTGCAAAACATTTTTTGGCTGCCAGCATTGATCATTGTGAATACCCAGAATTAATGAGCAGTAATAATGTTGCCATCTATGGTGGACTTTGCGCACTTGCTACATTTGATCGTTCAGAGTTGCAGAAACAAGTCATAGTTAGCAGTTCTTTTAAATTATTCTTAGAGCTAGAGCCCCAATTACGTGACATAATTTTCAAATTCTATGAATCCAAATATGCCTCGTGCTTACGGCTGTTGGATGAAATAAGGGATAATCTTTTGTTGGACATGTATTTAGCACCACATATAAATTCTTTATACATGCAAATTCGCAACAGGGCTTTGATTCAATACTTTAGCCCTTACTTGTCAGCTGATATGAAATTAATGGCGGCTGCATTTAACCGATCGGTGATTGCCTTAGAAGATGAACTAATGCAACTTATACTTGATGGGCAAATTCAGGCTAGGATTGATTCACATAATAAAATATTATATGCAAAAGATGTAGACCAGAGGAGCACAACATTTGAAAGAAGTTTAGCCATGGGAAAAGAATACCAACGGCGTACGTCAATGTTAATTTTGCGTGCTGCAATGCTCAAAAACCAAATCCATGTAAAGAATATTGGCAGAGACATAGGACCTCAAAGTGGAGAAGCTCCAGGCTCCAGTACTAGTTTGAACACTCGCACTTTCGATCCAGTACCTCTGTGA

Protein

MNTAEPMQVDIPPEDNENNETECYVVENPTLDLETYAASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKLSEAVASAGLPDIAGSQDIPVLDTIWVESKTKKAAIKLEKLDTDLKNYKTNSIKESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYCTSGKHLVMMCLNVVKVSVYLQNWAHVLNYVSKAEATPDFNEIPGKDSNQSILTRLKCAAGLAELATKKYKSAAKHFLAASIDHCEYPELMSSNNVAIYGGLCALATFDRSELQKQVIVSSSFKLFLELEPQLRDIIFKFYESKYASCLRLLDEIRDNLLLDMYLAPHINSLYMQIRNRALIQYFSPYLSADMKLMAAAFNRSVIALEDELMQLILDGQIQARIDSHNKILYAKDVDQRSTTFERSLAMGKEYQRRTSMLILRAAMLKNQIHVKNIGRDIGPQSGEAPGSSTSLNTRTFDPVPL

Uniprot

Q2F5R2   A0A2A4K6X6   A0A2H1W709   S4Q0A8   A0A3S2LQQ0   A0A212FJ83   + More
A0A194RHK1   A0A0L7LHE4   D6WF13   A0A2J7QSS0   A0A0T6B394   A0A2J7QSR7   A0A067RBT3   E2BWT6   A0A1Y1LAQ0   A0A1Y1LAP6   A0A1L8DW78   E2A7N4   E9I9P5   A0A195CKR1   A0A195EV85   A0A0J7KR61   A0A151I0R2   A0A2A3ESE3   A0A088AP80   A0A151J0G6   F4WMJ1   A0A1B6LTV4   A0A158NAE9   A0A151X4Y1   A0A1B0DBQ5   E0VVX5   A0A0L7QN62   A0A026WG97   A0A1W4WN96   A0A154PNT6   T1J1H8   A0A2R7W465   A0A310STA3   R4WTT0   A0A1B6EQ85   A0A1B6E3J4   A0A1B0CY66   A0A0V0G9E2   A0A069DTZ7   A0A224XFP5   A0A0A9X3K0   A0A182JVZ8   A0A182PTV4   A0A0K8SNE6   A0A182UWY4   A0A182KNP6   Q7Q7Y5   A0A182HQL1   A0A232FC43   A0A182J1J0   A0A087URG7   A0A0L0C7W4   A0A0P4VQI5   A0A1I8NY35   A0A182SKX2   R4G461   A0A023F9C2   A0A182YR54   A0A182XEG8   A0A182MQR2   A0A182WM19   A0A1I8N4T2   A0A182RE50   A0A182TD49   A0A182Q6R4   A0A182N1Y9   T1PC05   A0A1B0C6Q0   A0A1A9ZDX0   A0A146MFQ9   A0A1A9WLL5   A0A084WE14   A0A0P6IY33   A0A034WPS5   A0A0K8TVX2   A0A0A1XQY2   A0A1A9XJV5   A0A1A9UKQ9   A0A182H2Z8   W8BBQ2   A0A2R5LEC8   A0A1B0GF73   W5JV58   A0A2M4AKP4   K1RS36   A0A2M4AJT4   A0A1Q3G2N0   A0A210QT24   A0A1S3JDM1   A0A224YK68   A0A131YJI1   A0A131YE58   A0A1J1I5K2   L7MGY1  

Pubmed

19121390    23622113    22118469    26354079    26227816    18362917    + More
19820115    24845553    20798317    28004739    21282665    21719571    21347285    20566863    24508170    30249741    23691247    26334808    25401762    20966253    12364791    14747013    17210077    28648823    26108605    27129103    25474469    25244985    25315136    26823975    24438588    26999592    25348373    25830018    26483478    24495485    20920257    23761445    22992520    28812685    26383154    28797301    26830274    25576852   

EMBL

BABH01011964    DQ311361    ABD36305.1    NWSH01000114    PCG79410.1    ODYU01006722    + More
SOQ48823.1    GAIX01000113    JAA92447.1    RSAL01000416    RVE41814.1    AGBW02008299    OWR53794.1    KQ460205    KPJ16800.1    JTDY01001185    KOB74616.1    KQ971319    EFA00464.1    NEVH01011228    PNF31628.1    LJIG01016106    KRT81598.1    PNF31629.1    KK852567    KDR21197.1    GL451188    EFN79800.1    GEZM01061168    JAV70714.1    GEZM01061169    JAV70713.1    GFDF01003384    JAV10700.1    GL437365    EFN70555.1    GL761846    EFZ22741.1    KQ977642    KYN01042.1    KQ981954    KYN32175.1    LBMM01004181    KMQ92724.1    KQ976600    KYM79473.1    KZ288193    PBC34049.1    KQ980629    KYN14995.1    GL888217    EGI64602.1    GEBQ01012928    JAT27049.1    ADTU01010271    KQ982519    KYQ55486.1    AJVK01013756    AJVK01013757    AAZO01005714    DS235815    EEB17531.1    KQ414875    KOC59916.1    KK107231    QOIP01000009    EZA54973.1    RLU18601.1    KQ435007    KZC13519.1    JH431785    KK854311    PTY14506.1    KQ759770    OAD62933.1    AK418112    BAN21327.1    GECZ01029683    JAS40086.1    GEDC01004813    JAS32485.1    AJWK01035499    AJWK01035500    AJWK01035501    GECL01001420    JAP04704.1    GBGD01001306    JAC87583.1    GFTR01006572    JAW09854.1    GBHO01029045    JAG14559.1    GBRD01011480    GBRD01011479    JAG54345.1    AAAB01008948    EAA10359.4    APCN01004655    NNAY01000462    OXU28202.1    KK121203    KFM79956.1    JRES01000760    KNC28503.1    GDKW01001876    JAI54719.1    ACPB03001908    GAHY01001625    JAA75885.1    GBBI01000732    JAC17980.1    AXCM01003001    AXCN02000977    KA646302    AFP60931.1    JXJN01026846    GDHC01000001    JAQ18628.1    ATLV01023101    KE525340    KFB48458.1    GDUN01000213    JAN95706.1    GAKP01003219    GAKP01003217    JAC55733.1    GDHF01033690    JAI18624.1    GBXI01001309    JAD12983.1    JXUM01024326    KQ560687    KXJ81265.1    GAMC01016001    GAMC01015999    JAB90556.1    GGLE01003682    MBY07808.1    CCAG010012769    ADMH02000266    ETN67188.1    GGFK01008032    MBW41353.1    JH816099    EKC37296.1    GGFK01007722    MBW41043.1    GFDL01001046    JAV33999.1    NEDP02002059    OWF51862.1    GFPF01006901    MAA18047.1    GEDV01009829    JAP78728.1    GEDV01012366    JAP76191.1    CVRI01000042    CRK95560.1    GACK01001982    JAA63052.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053240    UP000037510    + More
UP000007266    UP000235965    UP000027135    UP000008237    UP000000311    UP000078542    UP000078541    UP000036403    UP000078540    UP000242457    UP000005203    UP000078492    UP000007755    UP000005205    UP000075809    UP000092462    UP000009046    UP000053825    UP000053097    UP000279307    UP000192223    UP000076502    UP000092461    UP000075881    UP000075885    UP000075903    UP000075882    UP000007062    UP000075840    UP000215335    UP000075880    UP000054359    UP000037069    UP000095300    UP000075901    UP000015103    UP000076408    UP000076407    UP000075883    UP000075920    UP000095301    UP000075900    UP000075902    UP000075886    UP000075884    UP000092460    UP000092445    UP000091820    UP000030765    UP000092443    UP000078200    UP000069940    UP000249989    UP000092444    UP000000673    UP000005408    UP000242188    UP000085678    UP000183832   

PRIDE

Q2F5R2   

Pfam

PF10602   RPN7        + More
PF01399   PCI
PF00046   Homeodomain
PF06398   Pex24p
PF06462   Hyd_WA
PF13419   HAD_2

Interpro

IPR033008   CSN1        + More
IPR036390   WH_DNA-bd_sf       
IPR000717   PCI_dom       
IPR019585   Rpn7/CSN1       
IPR009057   Homeobox-like_sf       
IPR001356   Homeobox_dom       
IPR010482   Peroxin       
IPR006614   Peroxin/Ferlin       
IPR006624   Beta-propeller_rpt_TECPR       
IPR011949   HAD-SF_hydro_IA_REG-2-like       
IPR023214   HAD_sf       
IPR041492   HAD_2       
IPR036412   HAD-like_sf       
IPR006439   HAD-SF_hydro_IA       
IPR011990   TPR-like_helical_dom_sf       

SUPFAM

SSF46785   SSF46785        + More
SSF46689   SSF46689       
SSF56784   SSF56784       
SSF48452   SSF48452       

Gene 3D

3.40.50.1000    

CDD

cd00086  homeodomain

ProteinModelPortal

Q2F5R2   A0A2A4K6X6   A0A2H1W709   S4Q0A8   A0A3S2LQQ0   A0A212FJ83   + More
A0A194RHK1   A0A0L7LHE4   D6WF13   A0A2J7QSS0   A0A0T6B394   A0A2J7QSR7   A0A067RBT3   E2BWT6   A0A1Y1LAQ0   A0A1Y1LAP6   A0A1L8DW78   E2A7N4   E9I9P5   A0A195CKR1   A0A195EV85   A0A0J7KR61   A0A151I0R2   A0A2A3ESE3   A0A088AP80   A0A151J0G6   F4WMJ1   A0A1B6LTV4   A0A158NAE9   A0A151X4Y1   A0A1B0DBQ5   E0VVX5   A0A0L7QN62   A0A026WG97   A0A1W4WN96   A0A154PNT6   T1J1H8   A0A2R7W465   A0A310STA3   R4WTT0   A0A1B6EQ85   A0A1B6E3J4   A0A1B0CY66   A0A0V0G9E2   A0A069DTZ7   A0A224XFP5   A0A0A9X3K0   A0A182JVZ8   A0A182PTV4   A0A0K8SNE6   A0A182UWY4   A0A182KNP6   Q7Q7Y5   A0A182HQL1   A0A232FC43   A0A182J1J0   A0A087URG7   A0A0L0C7W4   A0A0P4VQI5   A0A1I8NY35   A0A182SKX2   R4G461   A0A023F9C2   A0A182YR54   A0A182XEG8   A0A182MQR2   A0A182WM19   A0A1I8N4T2   A0A182RE50   A0A182TD49   A0A182Q6R4   A0A182N1Y9   T1PC05   A0A1B0C6Q0   A0A1A9ZDX0   A0A146MFQ9   A0A1A9WLL5   A0A084WE14   A0A0P6IY33   A0A034WPS5   A0A0K8TVX2   A0A0A1XQY2   A0A1A9XJV5   A0A1A9UKQ9   A0A182H2Z8   W8BBQ2   A0A2R5LEC8   A0A1B0GF73   W5JV58   A0A2M4AKP4   K1RS36   A0A2M4AJT4   A0A1Q3G2N0   A0A210QT24   A0A1S3JDM1   A0A224YK68   A0A131YJI1   A0A131YE58   A0A1J1I5K2   L7MGY1  

PDB

4WSN     E-value=0,     Score=1639

KEGG

693104    K12175 COP9 signalosome complex subunit 1 | (RefSeq) G protein pathway suppressor 1

GO

GO:0008180   GO:0000338   GO:0003677   GO:0016021   GO:0016787   GO:0000502   GO:0005515   GO:0003824   GO:0005506   GO:0016705   GO:0020037   GO:0006811   GO:0016020   GO:0005634   GO:0006260  

PANTHER

PTHR14145:SF2  

Subcellular location

Nucleus  

Length:

477

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06345

Exp number, first 60 AAs:

0.00431

Total prob of N-in:

0.00665

outside

1  -  477

 

 

Pi

48.852117

Theta

156.750765

Tajima's D

-2.195837

CLR

2222.558656

CSRT

0.00619969001549923

Interpretation

Uncertain