SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06659
Pre Gene Modal
BGIBMGA011772
Annotation
PREDICTED:_uncharacterized_protein_LOC101746815_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.46
 

Sequence

CDS
ATGACAAGTTTTTGTGAATTAACATCAGCTGTTATAGAAGAATCTATAAAATCAAAGTTTAGCAAAAAAATACACAAAAATCATCATAGCTTTGCTTTCGTAGCTAAACATATTGCACATAAGCATAAATGCAGCAAAGCACTTAAAAGAAAGTTAAAAAAATATAAATTGAGACATGATGGGCAGGAAGATCAAGATGTATTAGATGTATCAGAAACACTTATCTCATCTTTAACTATAAAATCTCCAGGAAAAACCGATTCTGAAGATTCATTATCAAATGAAAATAACTTAAAACCAATAAACTATTTGTTTAAAATGGTTAGAAAAAGGAAAACTCAAATGCCTATTCAAAATTATAATAGTGAATTTAAAGAAAATCCTGAAGAAATCACAAATTTCAACAAAGGTACAGTTGATTCTGATATTTCTAACTCAACATCAAGTAAAGCTCTGGAGAAGAAACATACAAATGCCTTTAAATTACTTATGGATTCAAGAAATAAAAGTATTGGTTCAAATTCACCTGGCAAAGATAAACCAGATGAAGAATCAGCAGACTTAAGTGATAAAAAGAGTACAAAAGCTAAGAGAATGCTTATGTTACAAAAGATGGCTGAAACTAAAGGTTCATTGAAAAGAAAAGAAGTTGAAGAATTCCATGAAAATTGTATCAAGAGAAAACTAGAAGAAAGAGCTCAAAACTTCAAAAGTATGCTCTTAAATCAAGAAAGTAAATTAAGAACAAACAAGGCATACAATCAAGAGGCTGATGATACTACTGACAAACTTAATGAGATTTCAAGTGGAAGAAATGACAGAGCATTGCAGTTAATAAACATCTTCGAAGAACCAGAAATTGAGGCTAATATAAGTAAGAAAAATAAAAACCCACTGAGCAAAGAAGATGAAGAGTTTTTGAAGAAATTATCACCTTCAATCAAAAAGAAAGAAAATATGTTATGTTACTTTAAGAAAGTTGAAAAAGAATCTATTTCCCCTATTGAATCTGAAACTGAAAATACTGTTATCAAAGTTAAATTGGCCACTAGATCTAAGAAGAAAAGTAAAAAGAAAAAGAACGACTTGAAAAGCATTGCAAAATGTGATAATATAAATGATTCAGAAATAAATCAGGAAACTTCAATAGTAAATTGTCTAGAATCGTCAACTGATCAGCATTTTGTAGAAAAAGGTAGAAAATGTATTAATAAATCTAAACGTAAACGTAATTATGTAGAATTTAAGAAAGCAAAACAAGATTGTGAAAAAAGTCACATAGCTGCATGTAATGAAGAGAGACCGAAGCGAAACGTAAAGAAACCAATCAAGTATATAGATAATGTTTTTCCATCAAGTTCAGATGAAGAATTACATATATTTACACCAAAAAAGAAAAAACCCTCTGAACCTATTCTGCAGTCAGATAGTCCAAAGAAACATAAAGCAGTTGACAAATTAAATTCAGTGCAGAAAATGAGATCAAAGGTTACACAAAAAGAAAGTAAACTGGGACTGAAAAAAGATGTTAAATTAGCACCAATTTTTAACCCAAAGCACCCATTTAATTCTGTTGAAAATGAAGCAAAACAGAAATTTCTTCAAAGTGGTGTACCAGAACAAATAAAAAAAATGATGTCTCAGCAAAAATCAAAGGATGTCTTTGTCGATTATTTTCCAGTAGTTGTGCATGTTCAGCAAAAAAATAGGGCAGAAGTAACACATGAAAAAGATCTACCAAAATCAGTTGATCCTTTTGACAGTTCTGACCTCGACAATTTGATTCCAATTAATGGATCTTTTAGAGAAATAATTAATAACAGTTATCATTTCTATAAAGCAAAAGAAGCACCAATAGTAAATAAAAGTATTAAAGAGTTTCTTCAACATATGAAAACTTTAAAACCAAATTTTCCTGTTTACAGAACATATAGACTGCTAAGAGATAAAAAAAAGGGAGAACTGAAAGATAATAGTTTTTTAAATCTCGATAATAGTATAGAAGTATTAAATGGTTTAATAGAAATAAGTAATGATAATCCAGATCAGCTATCTTGGATTGATAAATATAGGGCAACATCAACTAATCAAATAATTGGCAATTACGAAACAATCAAGGAATTGAAAAAGTGGTTAATTTCATGGAATGAAAATCAGTTACAATCAAAACAACGATTAGATTCCGATTGTGATTCATCTGACTTTTACAATTCAGATACAGATAGTAGGGACACTATTAAAAATGGAAATAATCTTGTAATTCTCACTGGGCCGGTTGGTAGTGGAAAAACTTCCAGTGTTTATGCAGTTGCAGCAGAACTAGCTATCAAAGTGATTGAGGTGAATGCAAGTACCAAAAGAAATGGAAAAATTATTTTGCAAGATTTACGTGAAGCAACAAAGTCACACAAAGTAAATAGAACAGCAAATAGTTTTGAAAACTCTCAAAAATCACAAGAAATTGTTATTCAAGATGTACCCAAAAAACGCGGTAGAACAAAGAAAACGGTTGAGAAAAATGATAAAACTGAAAAACATTCAGATAAAAAACATTCTATAAATTTTTCACAAAATAGTCAAGAAGTCATGAGAACAGATTCATCTCTTATTTTGATTGATGATGCTGATATCGTTTTTGAACAAGATGATGGATTTTGTTCAGCTATTGTCCAAATAGTACAAAGTTCAAAAAGGCCTGTTATTTTAGTAACTTCTTCATTTTCATGTCCACATCTACAAAGATTTTTGCTGAGTGGGAAAATTTTAAAATTCAACCAACTTATGCCTAGATTGCTTGGTCCCTGGCTGGATGTGATGTGTCTCGTTGAAAATGGTTCTTGCTATCCTGGAACTGGTGCCAGATTTTTAGATTACTTCAAAGGAGACATAAGAAAAACAATAAACTGTTTACAGTTTTATACATCACCAGTGAAAATTGTTGCTAATGATGTTCCTCAAATTGACTTTAAGTCTCAGCACGATGATGAGAAGTCTAGCATGTCATGGGCTGATCGTGATGAAATGGAAGAAATGAATATAGAGTCATGTATTACATCTGAAAATACTACATATTTGTGGCATCAGTTCCAGCACACTCATTTAGTAAGTGATGAAAATATCCTAAATATTTGGTGGAATCTACCCCAACTACTTAACATAAATAATGATAGCAATATTATAGAAAACACAGCAAAAAGACATTCTAATGGTGACCTACAATCATTGGCTGCTACAATAGACAGCATTTCATTAGCAGATTATTTTTGTCCCAGAAATAATCACAGTACTGATGTCGTTTCTAAGCTTTGGTACTCAAAAGAGAGTCCCACAGTCTTAGAACAAGAAAATTTCGACGAATATAGAAATAGTGATCAAAGCAGCATAGAAATATCACAGGCATTAACAAGCATTTCATTGATAAATGCACAAAAACGATTCAAGGTAGACAGTAGCTATGAAATATATTTCCCTGGGATTATAACACAGAGAGAACGGGACGCTGTTTTATCACGCCATAACAACTTGACGGCCTGCTTAAACCCGTCAGTTGTTCTTGACAGAAAATCTTTGGCCCTAGATTATTGGCCTTCCTGCCGAAATTTATGA
Protein
MTSFCELTSAVIEESIKSKFSKKIHKNHHSFAFVAKHIAHKHKCSKALKRKLKKYKLRHDGQEDQDVLDVSETLISSLTIKSPGKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSEFKENPEEITNFNKGTVDSDISNSTSSKALEKKHTNAFKLLMDSRNKSIGSNSPGKDKPDEESADLSDKKSTKAKRMLMLQKMAETKGSLKRKEVEEFHENCIKRKLEERAQNFKSMLLNQESKLRTNKAYNQEADDTTDKLNEISSGRNDRALQLINIFEEPEIEANISKKNKNPLSKEDEEFLKKLSPSIKKKENMLCYFKKVEKESISPIESETENTVIKVKLATRSKKKSKKKKNDLKSIAKCDNINDSEINQETSIVNCLESSTDQHFVEKGRKCINKSKRKRNYVEFKKAKQDCEKSHIAACNEERPKRNVKKPIKYIDNVFPSSSDEELHIFTPKKKKPSEPILQSDSPKKHKAVDKLNSVQKMRSKVTQKESKLGLKKDVKLAPIFNPKHPFNSVENEAKQKFLQSGVPEQIKKMMSQQKSKDVFVDYFPVVVHVQQKNRAEVTHEKDLPKSVDPFDSSDLDNLIPINGSFREIINNSYHFYKAKEAPIVNKSIKEFLQHMKTLKPNFPVYRTYRLLRDKKKGELKDNSFLNLDNSIEVLNGLIEISNDNPDQLSWIDKYRATSTNQIIGNYETIKELKKWLISWNENQLQSKQRLDSDCDSSDFYNSDTDSRDTIKNGNNLVILTGPVGSGKTSSVYAVAAELAIKVIEVNASTKRNGKIILQDLREATKSHKVNRTANSFENSQKSQEIVIQDVPKKRGRTKKTVEKNDKTEKHSDKKHSINFSQNSQEVMRTDSSLILIDDADIVFEQDDGFCSAIVQIVQSSKRPVILVTSSFSCPHLQRFLLSGKILKFNQLMPRLLGPWLDVMCLVENGSCYPGTGARFLDYFKGDIRKTINCLQFYTSPVKIVANDVPQIDFKSQHDDEKSSMSWADRDEMEEMNIESCITSENTTYLWHQFQHTHLVSDENILNIWWNLPQLLNINNDSNIIENTAKRHSNGDLQSLAATIDSISLADYFCPRNNHSTDVVSKLWYSKESPTVLEQENFDEYRNSDQSSIEISQALTSISLINAQKRFKVDSSYEIYFPGIITQRERDAVLSRHNNLTACLNPSVVLDRKSLALDYWPSCRNL

Summary

Pfam
PF13401   AAA_22        + More
PF00004   AAA
Interpro
IPR003593   AAA+_ATPase        + More
IPR027417   P-loop_NTPase       
IPR003959   ATPase_AAA_core       
SUPFAM
SSF52540   SSF52540       
PDB
1SXJ     E-value=3.49584e-06,     Score=126

Ontologies

Topology

Length:
1201
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00171
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1201
 
 

Population Genetic Test Statistics

Pi
195.339986
Theta
195.16788
Tajima's D
0.122567
CLR
0.608354
CSRT
0.403629818509075
Interpretation
Uncertain
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