SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06657  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011774
Annotation
PREDICTED:_purine_nucleoside_phosphorylase-like_isoform_X2_[Amyelois_transitella]
Full name
Purine nucleoside phosphorylase      
Alternative Name
Inosine-guanosine phosphorylase
Location in the cell
Cytoplasmic   Reliability : 3.355
 

Sequence

CDS
ATGGCACCTATAAACGCGAACGATATCGTGGAGAAAAATTGTTTGGTCACGCAGAAGGTCCTGCCGGAAATCGGATCTGATTGTAATGGAAATGAAAAAACTGGATATTCTTATGAAACATTAGTGGAGACCGCAAATTTCTTGCTGTCGAGAATATCAGAGAAACCGAACATTGGGATCATTTGCGGCTCTGGGATGGGTTCACTAGCAGAAAGTATAACAGACGGCGTAAGAATACCATACGAAGATATTCCAAACTTTCCCATAAGCACAGTGGAGGGTCATCATGGTCAGCTTGTTTTCGGTCACATAGAAGGAGTGTCCGTCGTTGCTATGCAGGGCCGTTTTCATTACTACGAAGGATATCCACTGTGGAAGTGTTGTCTACCAGTGCGAGTGATGAAACTGTTGGGAGTGAAAATTTTAATAGCGACTAACGCTGCAGGCGGCCTTAACCCTAACTACAAAATTGGTGATCTGATGATTGTAAGAGACCACATCAACATGATGGGTTTTGCTGGAAACAATCCTTTGCATGGACCCAATGACGAGAGGTTTGGACCTAGATTCCCCCCTATGAACAAAGCCTATAATTATGAATTTAGAAAAATTGCTAAAGAGGTTGCGAAGGAATTAAACATCGATCATATTGTAAGGGAAGGAGTTTATACATGTTTGGGCGGTCCAAATTTCGAGACAGTCGCCGAATTGAATATGTTAAAGATGGTTGGAGTAGACGCTGTTGGCATGTCTACTGTTCACGAGGTTATCACAGCTAGACACTGCGACATTAAAGTATTCGGATTATCTCTGATTACGAATGAATGCATTACTAATTACGATCAAGATGCAGAAGCTAATCACGAGGAAGTTCTTGACGTAGGCCGTATGAGGCAGGAAATGCTCCGAAAATATGTATCCTGTCTTGTTAAGAAATTCTCACAGGCCGACCCTGATGCACCATGA
Protein
MAPINANDIVEKNCLVTQKVLPEIGSDCNGNEKTGYSYETLVETANFLLSRISEKPNIGIICGSGMGSLAESITDGVRIPYEDIPNFPISTVEGHHGQLVFGHIEGVSVVAMQGRFHYYEGYPLWKCCLPVRVMKLLGVKILIATNAAGGLNPNYKIGDLMIVRDHINMMGFAGNNPLHGPNDERFGPRFPPMNKAYNYEFRKIAKEVAKELNIDHIVREGVYTCLGGPNFETVAELNMLKMVGVDAVGMSTVHEVITARHCDIKVFGLSLITNECITNYDQDAEANHEEVLDVGRMRQEMLRKYVSCLVKKFSQADPDAP

Summary

Description
The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
Catalytic Activity
a purine D-ribonucleoside + phosphate = a purine nucleobase + alpha-D-ribose 1-phosphate
Similarity
Belongs to the PNP/MTAP phosphorylase family.
EC Number
2.4.2.1
EMBL
BABH01011972    BABH01011973    BABH01011974    NWSH01000114    PCG79402.1    RSAL01000448    + More
RVE41679.1    KQ461190    KPJ07146.1    AK401591    BAM18213.1    AGBW02008724    OWR52690.1    ODYU01008119    SOQ51447.1    KQ459590    KPI97399.1    AK402694    BAM19316.1    GL888711    EGI58340.1    KQ981130    KYN09268.1    KQ982797    KYQ50582.1    KQ981550    KYN40023.1    KK107238    QOIP01000007    EZA54836.1    RLU20810.1    UFQT01001029    UFQT01002424    SSX28540.1    SSX33425.1    KZ288282    PBC29589.1    JR038612    AEY58341.1    GALX01003951    JAB64515.1    KQ971331    EFA01001.1    GL436926    EFN71333.1    GBYB01001005    JAG70772.1    GEZM01036044    JAV83009.1    JR038611    AEY58340.1    GALX01003950    JAB64516.1    ADTU01020586    ADTU01020587    ADTU01020588    KQ977231    KYN04741.1    KQ976697    KYM77520.1    GEZM01036045    JAV83008.1    KQ435726    KOX78203.1    JRES01000390    KNC31720.1    KA646495    AFP61124.1    GFDG01001274    JAV17525.1    GBXI01017114    GBXI01010393    JAC97177.1    JAD03899.1    GAMC01010671    JAB95884.1    GFDG01001273    JAV17526.1    GFDG01003613    JAV15186.1    GAMC01010672    JAB95883.1    GBXI01005634    JAD08658.1    NEVH01014359    PNF27771.1    GECZ01018750    JAS51019.1    GDHF01005893    GDHF01002942    JAI46421.1    JAI49372.1    CCAG010019517    CCAG010019518    EZ422314    ADD18590.1    GAKP01018108    JAC40844.1    GDHF01019510    JAI32804.1    CVRI01000050    CRK99446.1    GAKP01018107    JAC40845.1    JXJN01001758    NNAY01004028    OXU18474.1    GDHF01020076    JAI32238.1    PNF27772.1    GDHF01016932    JAI35382.1    GBBM01001916    JAC33502.1    KQ434806    KZC06117.1    GECZ01004399    JAS65370.1    APGK01053843    KB741237    ENN72187.1    CAQQ02024629    CAQQ02024630    CAQQ02024631    CAQQ02024632    GFAC01001228    JAT97960.1    GFPF01011123    MAA22269.1    JO840977    AEO32594.1    ADMH02000830    ETN64943.1    GEDV01004705    JAP83852.1    KK852879    KDR14468.1    GFPF01011122    MAA22268.1    GBBL01001592    JAC25728.1    GEDV01011939    JAP76618.1    JH431796    GGFL01002334    MBW66512.1    GGFL01002265    MBW66443.1    GEFH01000178    JAP68403.1    KQ414584    KOC70646.1    GBBK01003167    JAC21315.1    GGFK01001707    MBW35028.1    GGFK01001641    MBW34962.1    QCYY01002961    ROT66297.1    GANO01002043    JAB57828.1    GGFJ01006904    MBW56045.1    GDRN01063561    JAI64958.1    GDRN01063559    JAI64960.1    GDRN01063560    JAI64959.1    GGFM01002984    MBW23735.1    GGFJ01008118    MBW57259.1    ATLV01022056    KE525327    KFB47143.1    GDIQ01189274    JAK62451.1    GFDL01008448    JAV26597.1    GFDL01008430    JAV26615.1    GDIQ01244059    JAK07666.1    GDIQ01186321    GDIQ01119202    GDIP01116511    LRGB01002384    JAL32524.1    JAL87203.1    KZS07994.1    GDIQ01201776    GDIQ01189275    JAK49949.1    GL732565    EFX76980.1   
Pfam
PF01048   PNP_UDP_1        + More
PF00009   GTP_EFTU
Interpro
IPR011270   Pur_Nuc_Pase_Ino/Guo-sp        + More
IPR035994   Nucleoside_phosphorylase_sf       
IPR000845   Nucleoside_phosphorylase_d       
IPR011268   Purine_phosphorylase       
IPR018099   Purine_phosphorylase-2_CS       
IPR000795   TF_GTP-bd_dom       
IPR027417   P-loop_NTPase       
SUPFAM
SSF53167   SSF53167        + More
SSF52540   SSF52540       
Gene 3D
PDB
2P4S     E-value=7.95132e-101,     Score=936

Ontologies

Topology

Length:
321
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.09569
Exp number, first 60 AAs:
0.00064
Total prob of N-in:
0.02429
outside
1  -  321
 
 

Population Genetic Test Statistics

Pi
283.400321
Theta
190.576673
Tajima's D
1.663534
CLR
0.304513
CSRT
0.826308684565772
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26280517 ISEIPQIR 96.30 3e-11
28556443 VLEYVAQLVINR 100.00 4e-09
26280517 DAHPYVTIPETYNGNQITSYGGHIK 95.24 9e-09
26280517 MKEICIMK 100.00 3e-06
28556443 VLPEIGSDCNGNEK 100.00 3e-06
26280517 ISDYIPSPYPNENAAR 100.00 7e-06
28556443 EGSLAESITDGVR 100.00 7e-06
28556443 IGDLMIVR 100.00 8e-04
28556443 ISEKPNIGIICGSGMGSYWK 100.00 0.002
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