Gene

KWMTBOMO06656  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011707

Annotation

PREDICTED:_epimerase_family_protein_SDR39U1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr11(+):12260622-12265866      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.183

CDS

ATGACTGCAAAAAGTGTAATAATCGGTGGCGGCACCGGTTTTATTGGAAAACATTTAGGCGAACTGCTTTCATCAAAAGGATATGATATAATGAACGTAGCTCGTATGCCAGCCTCGAAAAATATATCCTGGTCAACAATAGAGGCCTCCGGCTTACCAAAAGATACTTCGGCTGTTGTCAATTGTGCTGGACAACAATTCATGGACTTTACCAAGTCCTGGACACCAGGATTCAAACAAAATGTACAGAATTCACGTATCTACACAACTAAAGCCTTGGCTACCGCTATAAACAAAGCTCAAGATAAACCAAAAGTATTTGTACTAGTTACAGGAGTTGGTGCATATGAACCTTCAAATGTAAATAAATATGATGAGAGCAGTCCTACAACTGGGACAGATTTCTTCTCACGGTTAGTCGTTGAATGGGAAAAAGCTGCTCAAGTAGATCCACCAGTGAGACTTGTGATTATTCGTTCTGGAGCTGTTCTAGGTAGATGGGGTGGTATGATAAAGAACATGTTTTTACCCTTTTTTTTGGGTTTCGGAGGACCCATAGGTGATGGAAAACAATACTTGCCCTGGATCCACATAGACGACCTCACGAGATTAATTAATTTTGCCATAGAAAACGAGAATGTCAAAGGGGTATTGAATGGTGTATCTCCAAATGTTATCACTAATGAAGAATTTACCAAGTCATTCGCGAAGGCATTAGGACGACCAGCGTTCATACCAGTACCAGAAGCAATCTTGAACTTCGCACTGCATCCAGAAAGGGCTATGATTATGACCAAAGGGCAGCATGTCATACCAAAGAGGGTTCTTGAATATGGGTTCAAATATCGTTATGAAAACATTAATGATGCCTGCAAAGAGTTCGCGCATCTTTTCCCTAAGAAAAACGTATAA

Protein

MTAKSVIIGGGTGFIGKHLGELLSSKGYDIMNVARMPASKNISWSTIEASGLPKDTSAVVNCAGQQFMDFTKSWTPGFKQNVQNSRIYTTKALATAINKAQDKPKVFVLVTGVGAYEPSNVNKYDESSPTTGTDFFSRLVVEWEKAAQVDPPVRLVIIRSGAVLGRWGGMIKNMFLPFFLGFGGPIGDGKQYLPWIHIDDLTRLINFAIENENVKGVLNGVSPNVITNEEFTKSFAKALGRPAFIPVPEAILNFALHPERAMIMTKGQHVIPKRVLEYGFKYRYENINDACKEFAHLFPKKNV

Uniprot

Q1HPI3   H9JQA1   A0A3S2P4P6   A0A2H1WEE5   A0A2A4K6K9   A0A212FG30   + More
A0A0L7LV04   A0A194QNQ5   A0A194PWL1   S4PSE5   A0A182Q715   A0A1Q3FH41   Q0IGD0   A0A182YCQ5   A0A182GTL6   A0A023EMV2   J3JVW3   W5JPW8   A0A2M4BWE1   A0A182SQB5   A0A1B6DNY7   A0A1B6CZH5   A0A182FJ03   D6WDT7   A0A182RKQ4   A0A182PX32   T1J546   A0A069DSE3   A0A0V0G9Y5   A0A1D2NAV2   A0A2M4APT7   A0A182W5W6   A0A182MPV6   A0A182IWF2   A0A0P4VLT9   R4G440   E9GAX2   A0A1Y1KKH0   A0A0P5AZ66   A0A0P5ZJ71   A0A0P5AZ47   A0A0P5WQV6   N6UAJ2   A0A084VLQ0   A0A0P6JUH1   A0A146MAQ1   A0A0A9WA03   A0A067R1Q1   B0XIU6   A0A182VAQ0   A0A182X7E5   A0A182LDL4   Q7PRQ8   A0A182I9Z3   A0A182TMF1   A0A2P6L138   A0A026VV11   A0A0J7L3Z3   E0VMY0   A0A2J7Q7A4   T1KGA1   A0A131Y486   A0A0P5TN60   A0A224YV42   E2A5M5   A0A023FW58   A0A2A3E793   A0A0M9A2J5   A0A151WWR5   A0A2L2Y9F7   A0A232F7I7   A0A182N0Y1   A0A2P8YI36   A0A0K8RLQ4   A0A1B0GPF5   A0A0P5U2C1   A0A1W4XUA1   A0A087ZV03   A0A195CUY1   K7J7P6   A0A1J1HUH5   A0A1B0GHF7   A0A1Y1KR40   E9IQN3   A0A293N6G8   T1E8J7   A0A1L8DXW7   A0A087TQC2   A0A131YFC2   A0A2T7NHX6   A0A195FQR4   E2BM57   A0A0L7R0D9   C3XTT4   C1BRF8   A0A226F4H4   A0A0P5P2G3   A0A023GHC9   M3Y2K5   A0A0L8GEL6  

Pubmed

19121390    22118469    26227816    26354079    23622113    17510324    + More
25244985    26483478    24945155    22516182    20920257    23761445    18362917    19820115    26334808    27289101    27129103    21292972    28004739    23537049    24438588    26823975    25401762    24845553    20966253    12364791    14747013    17210077    24508170    30249741    20566863    28797301    20798317    26561354    28648823    29403074    20075255    21282665    26830274    18563158   

EMBL

DQ443419    ABF51508.1    BABH01011975    RSAL01000448    RVE41680.1    ODYU01008119    + More
SOQ51448.1    NWSH01000114    PCG79403.1    AGBW02008724    OWR52689.1    JTDY01000028    KOB79323.1    KQ461190    KPJ07147.1    KQ459590    KPI97398.1    GAIX01013928    JAA78632.1    AXCN02001371    GFDL01008155    JAV26890.1    CH477260    EAT45709.1    JXUM01018161    KQ560504    KXJ82099.1    GAPW01002906    JAC10692.1    BT127381    AEE62343.1    ADMH02000500    ETN66186.1    GGFJ01007897    MBW57038.1    GEDC01009910    JAS27388.1    GEDC01018513    JAS18785.1    KQ971323    EFA00825.1    JH431850    GBGD01002238    JAC86651.1    GECL01001265    JAP04859.1    LJIJ01000113    ODN02382.1    GGFK01009421    MBW42742.1    AXCM01001832    GDKW01001173    JAI55422.1    ACPB03013537    ACPB03013538    GAHY01001121    JAA76389.1    GL732537    EFX83469.1    GEZM01081074    GEZM01081071    JAV61902.1    GDIP01196444    JAJ26958.1    GDIP01240039    GDIP01043205    LRGB01000389    JAM60510.1    KZS19301.1    GDIP01192248    JAJ31154.1    GDIP01083659    JAM20056.1    APGK01042722    KB741007    KB631811    ENN75632.1    ERL86350.1    ATLV01014543    KE524974    KFB38894.1    GDIQ01008130    JAN86607.1    GDHC01002999    JAQ15630.1    GBHO01041939    GBHO01041936    JAG01665.1    JAG01668.1    KK852777    KDR16736.1    DS233381    EDS29687.1    AAAB01008847    EAA06778.5    APCN01001075    MWRG01002755    PRD32280.1    KK107871    QOIP01000007    EZA47376.1    RLU20772.1    LBMM01000742    KMQ97592.1    DS235328    EEB14736.1    NEVH01017447    PNF24464.1    CAEY01000064    GEFM01002930    JAP72866.1    GDIP01127357    JAL76357.1    GFPF01010331    MAA21477.1    GL437023    EFN71268.1    GBBL01001553    JAC25767.1    KZ288345    PBC27617.1    KQ435783    KOX74633.1    KQ982686    KYQ52320.1    IAAA01015184    IAAA01015185    LAA04773.1    NNAY01000808    OXU26408.1    PYGN01000579    PSN43908.1    GADI01002344    JAA71464.1    AJVK01059626    GDIP01118758    JAL84956.1    KQ977276    KYN04460.1    AAZX01003037    AAZX01003039    CVRI01000021    CRK91661.1    AJWK01004552    GEZM01081073    GEZM01081072    JAV61906.1    GL764866    EFZ17120.1    GFWV01023061    MAA47788.1    GAMD01002117    JAA99473.1    GFDF01002835    JAV11249.1    KK116282    KFM67311.1    GEDV01010598    JAP77959.1    PZQS01000012    PVD20787.1    KQ981305    KYN42925.1    GL449158    EFN83183.1    KQ414670    KOC64315.1    GG666464    EEN68308.1    BT077187    ACO11611.1    LNIX01000001    OXA64081.1    GDIQ01134546    JAL17180.1    GBBM01002129    JAC33289.1    AEYP01038838    KQ422189    KOF75378.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000007151    UP000037510    UP000053240    + More
UP000053268    UP000075886    UP000008820    UP000076408    UP000069940    UP000249989    UP000000673    UP000075901    UP000069272    UP000007266    UP000075900    UP000075885    UP000094527    UP000075920    UP000075883    UP000075880    UP000015103    UP000000305    UP000076858    UP000019118    UP000030742    UP000030765    UP000027135    UP000002320    UP000075903    UP000076407    UP000075882    UP000007062    UP000075840    UP000075902    UP000053097    UP000279307    UP000036403    UP000009046    UP000235965    UP000015104    UP000000311    UP000242457    UP000053105    UP000075809    UP000215335    UP000075884    UP000245037    UP000092462    UP000192223    UP000005203    UP000078542    UP000002358    UP000183832    UP000092461    UP000054359    UP000245119    UP000078541    UP000008237    UP000053825    UP000001554    UP000198287    UP000000715    UP000053454   

PRIDE

Q1HPI3    H9JQA1   

Pfam

PF08338   DUF1731        + More
PF01370   Epimerase

Interpro

IPR013549   DUF1731        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR010099   SDR39U1       
IPR001509   Epimerase_deHydtase       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

Q1HPI3   H9JQA1   A0A3S2P4P6   A0A2H1WEE5   A0A2A4K6K9   A0A212FG30   + More
A0A0L7LV04   A0A194QNQ5   A0A194PWL1   S4PSE5   A0A182Q715   A0A1Q3FH41   Q0IGD0   A0A182YCQ5   A0A182GTL6   A0A023EMV2   J3JVW3   W5JPW8   A0A2M4BWE1   A0A182SQB5   A0A1B6DNY7   A0A1B6CZH5   A0A182FJ03   D6WDT7   A0A182RKQ4   A0A182PX32   T1J546   A0A069DSE3   A0A0V0G9Y5   A0A1D2NAV2   A0A2M4APT7   A0A182W5W6   A0A182MPV6   A0A182IWF2   A0A0P4VLT9   R4G440   E9GAX2   A0A1Y1KKH0   A0A0P5AZ66   A0A0P5ZJ71   A0A0P5AZ47   A0A0P5WQV6   N6UAJ2   A0A084VLQ0   A0A0P6JUH1   A0A146MAQ1   A0A0A9WA03   A0A067R1Q1   B0XIU6   A0A182VAQ0   A0A182X7E5   A0A182LDL4   Q7PRQ8   A0A182I9Z3   A0A182TMF1   A0A2P6L138   A0A026VV11   A0A0J7L3Z3   E0VMY0   A0A2J7Q7A4   T1KGA1   A0A131Y486   A0A0P5TN60   A0A224YV42   E2A5M5   A0A023FW58   A0A2A3E793   A0A0M9A2J5   A0A151WWR5   A0A2L2Y9F7   A0A232F7I7   A0A182N0Y1   A0A2P8YI36   A0A0K8RLQ4   A0A1B0GPF5   A0A0P5U2C1   A0A1W4XUA1   A0A087ZV03   A0A195CUY1   K7J7P6   A0A1J1HUH5   A0A1B0GHF7   A0A1Y1KR40   E9IQN3   A0A293N6G8   T1E8J7   A0A1L8DXW7   A0A087TQC2   A0A131YFC2   A0A2T7NHX6   A0A195FQR4   E2BM57   A0A0L7R0D9   C3XTT4   C1BRF8   A0A226F4H4   A0A0P5P2G3   A0A023GHC9   M3Y2K5   A0A0L8GEL6  

PDB

4B4O     E-value=1.25397e-66,     Score=641

KEGG

733038    K07071 uncharacterized protein | (RefSeq) SDR39U1; short chain dehydrogenase/reductase family 39U, m

GO

GO:0050662   GO:0003824  

Length:

303

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.88856

Exp number, first 60 AAs:

0.0686

Total prob of N-in:

0.05448

outside

1  -  303

 

 

Pi

53.455843

Theta

61.577041

Tajima's D

0.149165

CLR

0.542199

CSRT

0.415329233538323

Interpretation

Uncertain