Gene

KWMTBOMO06654  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011776

Annotation

programmed_cell_death_protein_5-like_protein_[Bombyx_mori]

Location

Bomo_Chr11(-):12246894-12248311      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.055

CDS

ATGGATGATCCGGAATTAGATCAAATTAGACAGCAACGTCTAGCTCAATTACAGGCGCAGCAAGGGGGAACAGGTGACCCGAGCAATGCCAAAGCACAACAAGAAAAAATGCAAGCAATGGAACAAGCTAAACACACTATATTGAGTCAAGCGCTAAGCCAAGATGCCCGAGCCAGATTGAACACAATCAAACTGGGTAGACCAGAGAAAGCTGCCATGATTGAAAACATGATCTGTCGAATGGCCCAAATGGGTCAGATTCAATGTAAAATAACTGAACCTGATTTAATACAAATTTTGGAATCCTTTAATCAACAAATGCCCAAATCTCAGAGCACCGTTAAGTTTGACAGAAGAAGAGCTGCATTGGACTCAGATGATGAAGATTTGTAA

Protein

MDDPELDQIRQQRLAQLQAQQGGTGDPSNAKAQQEKMQAMEQAKHTILSQALSQDARARLNTIKLGRPEKAAMIENMICRMAQMGQIQCKITEPDLIQILESFNQQMPKSQSTVKFDRRRAALDSDDEDL

Uniprot

A0FDQ0   A0A2A4K580   A0A2H1WEE2   A0A0L7LVY3   A0A1E1W3Y2   A0A194PVH8   + More
A0A194QP71   A0A212FG28   A0A3S2LQK0   S4PM40   A0A1Q3FCY9   A0A0T6AX82   A0A182Y0S4   A0A182TC79   A0A023ED88   A0A1J1IIG8   A0A023EFM6   A0A182GZ14   A0A131Y9S6   A0A0C9SAG5   W5JF19   A0A023FGD7   A0A2M4AXK4   B0WT64   A0A1E1WYW8   Q175U6   E0VLR2   A0A224YYB7   A0A131YTF5   T1DNQ2   A0A2M3ZCI2   A0A2M4C3A2   A0A182FHN2   V5IB04   L7LYI0   A0A2R5LFZ8   A0A2P8YI16   A0A2C9GTP3   A0A182UQ61   A0A182TK77   A0A182XCU9   Q7Q791   A0A182HM78   A0A182K7T3  

Pubmed

19121390    26227816    26354079    22118469    23622113    25244985    + More
24945155    26483478    26131772    20920257    23761445    28503490    17510324    20566863    28797301    26830274    25576852    29403074    20966253    12364791    14747013    17210077   

EMBL

BABH01011980    DQ985590    ABJ97180.1    NWSH01000114    PCG79405.1    ODYU01008119    + More
SOQ51450.1    JTDY01000028    KOB79331.1    GDQN01009371    JAT81683.1    KQ459590    KPI97396.1    KQ461190    KPJ07149.1    AGBW02008724    OWR52686.1    RSAL01000448    RVE41682.1    GAIX01003750    JAA88810.1    GFDL01009635    JAV25410.1    LJIG01022694    KRT79207.1    GAPW01006231    JAC07367.1    CVRI01000054    CRL00031.1    GAPW01005983    JAC07615.1    JXUM01098605    KQ564434    KXJ72285.1    GEFM01000159    JAP75637.1    GBZX01002603    JAG90137.1    ADMH02001337    ETN62962.1    GBBK01004272    GBBK01004271    JAC20210.1    GGFK01012206    MBW45527.1    DS232080    EDS34207.1    GFAC01007001    JAT92187.1    CH477395    EAT41859.1    DS235281    EEB14318.1    GFPF01010779    MAA21925.1    GEDV01006725    JAP81832.1    GAMD01002655    JAA98935.1    GGFM01005461    MBW26212.1    GGFJ01010666    MBW59807.1    GALX01000280    JAB68186.1    GACK01008179    JAA56855.1    GGLE01004306    MBY08432.1    PYGN01000579    PSN43896.1    AAAB01008960    EAA11945.4    APCN01004377   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053268    UP000053240    UP000007151    + More
UP000283053    UP000076408    UP000075901    UP000183832    UP000069940    UP000249989    UP000000673    UP000002320    UP000008820    UP000009046    UP000069272    UP000245037    UP000075882    UP000075903    UP000075902    UP000076407    UP000007062    UP000075840    UP000075881   

PRIDE

A0FDQ0   

Pfam

PF01984   dsDNA_bind

Interpro

IPR036883   PDCD5-like_sf        + More
IPR002836   PDCD5-like       

SUPFAM

SSF46950   SSF46950       

Gene 3D

1.10.8.140    

ProteinModelPortal

A0FDQ0   A0A2A4K580   A0A2H1WEE2   A0A0L7LVY3   A0A1E1W3Y2   A0A194PVH8   + More
A0A194QP71   A0A212FG28   A0A3S2LQK0   S4PM40   A0A1Q3FCY9   A0A0T6AX82   A0A182Y0S4   A0A182TC79   A0A023ED88   A0A1J1IIG8   A0A023EFM6   A0A182GZ14   A0A131Y9S6   A0A0C9SAG5   W5JF19   A0A023FGD7   A0A2M4AXK4   B0WT64   A0A1E1WYW8   Q175U6   E0VLR2   A0A224YYB7   A0A131YTF5   T1DNQ2   A0A2M3ZCI2   A0A2M4C3A2   A0A182FHN2   V5IB04   L7LYI0   A0A2R5LFZ8   A0A2P8YI16   A0A2C9GTP3   A0A182UQ61   A0A182TK77   A0A182XCU9   Q7Q791   A0A182HM78   A0A182K7T3  

PDB

2CRU     E-value=1.22843e-09,     Score=144

KEGG

778501    K06875 programmed cell death protein 5 | (RefSeq) programmed cell death protein 5-like protein

GO

GO:0003677   GO:0005634   GO:0005829   GO:0006629   GO:0051082   GO:0016021   GO:0006812   GO:0015299   GO:0006811   GO:0016020   GO:0006260  

PANTHER

PTHR10840  

Length:

130

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.14947

outside

1  -  130

 

 

Pi

119.857476

Theta

131.298968

Tajima's D

-0.508776

CLR

0.592423

CSRT

0.244437778111094

Interpretation

Uncertain