SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06651
Pre Gene Modal
BGIBMGA011704
Annotation
PREDICTED:_BAI1-associated_protein_3_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.502 Nuclear   Reliability : 1.93
 

Sequence

CDS
ATGAGTTTCTTAACATCATTGGGCCAGTATGTGGCGGGCGTAGCTGACAGTGTAGCCGGTCTGGCGCTCTCACCGCGGCGTGCACCGCCCTCACGACATCGCTCTGCCGAGGAGGGTCAGGCACAACAACCTCCACCGTCAACCGCTACTATGCGTGGATTTCCTAGAGTTCTACCAACAGAAGGCGCTTCTGCCCTGGGCGCCCGACGGCGCACTCTAGATTGCTTGGCTCCAGCACCAGCTCAACGACGCGGTGGATCACTCCGGGTGCCCCGTCACCAAGCACCACCTGAAAAACCCACGATGGCATTCTGCAAAAGACGTCTCTCTTGGCCAGAGGTCGATAACTCTGTGAACTCGGGGGTTCAAGACACGGATGGCTCTTACTTCGAAAGTTTCACGGCGCTGTCTTGGCGACAGGAGAACAGGCGGCTAGCAGCATTGAGACTGGCCGAAGCTAGGGCGGAACGCCCACCACCCATGCCCCAAGACCTTGGCCTGCCAAGTGTGTCTGCGCAACTTTCTCATAAAGAACATGAGCATTTGTACACTGAGGTACTATACTGCATTGAGAACGCAGTGGGAGCTCCGGCTCCAGACGGCCAATTCGCTGCTTACAAAGAAGAAGTGATAGAATACGCGAGGCGTGCTTTCCGAATTTCACAAGAAGTTCACGCGCGTGCTATCCGCGCCGCCGGCAGTGAGCGACCACCTACTGTCGTGCTCGGCTGCTCTGTCATAGAAGCTGATGGACTAGAGGCCAAGGATGCCAATGGGTTCAGCGATCCATATTGCATGTTGGGGATTCAACCAGCTTCTTTACCGGCATCACCTCGTGCATCAGAGGACGAAGGCCGCAAGCACGGGTTCCGTCTCAGCTTCAAGCGAAGAGACGGTCGACAACAACGAGACAGTCTTGGTAGACTCCCGGCACGTTACATCCGAGCCACGAGCGTACGACCACATACGCTCTCACCGAAATGGAATGAAACCTTCAAATTTGATATTGATGACATCTCATCGGATGTACTGCATCTGGACATTTGGGACCACGACGACGAGAGCTCCGTACTAGATGCTGTCTCTCGGCTGAACGAGGTCCGTGGAGTAAGGGGTCTTGGCCGCTTCTTTAAGCAAGTGTGTCAAAGCGCACGACAGGGAAGCCAGGATGACTTTCTAGGATGTGTGAACATACCTCTGCGGGAGATTCCGTCGACTGGCATCGAAGCTTGGTACAAGTTGGAGGCACGCTCACAACGCTCTTCGGTTCAAGGACGAATCCGCTTACGCCTCTGGTTATCAGCTCGTGAGGCAGGCCGCCACGACGACGACAATTGGCAACAGGTTCGTCAACACGAGCGCTTGTTCGGGGTTTTACTGTCGTATGAAGTGGACACGGCGGGTATGGTGAACGTAGTCGAGGGCGAAGCGAGCTCTGAGTGGGAAGGTGACTTATGCGGGGCAGCTCAAACTCTTTTGCATCAACATGCTATACAAGGAGACATGAGCGCGCTGCAAGCCGCCATCGCCCGTTTCGCTGCGGCTTGTAAACTGAACTGCGAAGCTCCTCTCGATCCCAAGTACATGTACAAATTGTTGACGGAGCTCGAACGAGCCTGGTGTGCGAGCGAGGCGGAGGTCGGCAGTTGCGCCGGGGAAAGCGCGTCGGGCCTCTCCCGCGACGAGGAACGCTGGCTCGCCGACTGCTTCGGAGAGTTTGTCGAACGCGGCCTGCATCAGATGCGACTCCACCGGGACCTCTATCCGGTGCTCCACGGCAATAGCTTGAACAAGTTGGAGTATCTACTGCGGTGTCTCAGCCAGCTGTCACAGATGAAAGCGTTTTGGCGTTGCTGTCCCTTCAATAAGGAAATCAGGAGTGAAATAGTGAGTTCCCTTCGCAAAGGCACTTCGGAATGGTACGAAGCGCTCTGTGCACAAGACACTGAGTCCGAGCGTGGCGAAGATCTTGTGAACCTCATCACACTAGTACAAATAGATCTTCAACAGGGGCTGACCTATTATCATCCGTTGTTCGAGATGACAAACAATGTTCCGTACTTTAGCGTGGTTTTCAATCAGATCGACAAAATGGTGACGGAAGACGTAAGGCAATGCGTCGAGCACTGGGTGGGTGAAGGTTGGTGCGGTGTGGCTGAGGAAGAATTATATGACGAACATCAGAATCCCATGTGCATAGTATCAGCAAAGACGCTGCCATTCGAGGTGTTGTCAGCGGTACGAGAGCTGTGCGCTGCAGCCGCCCCTGCGCCGCACTCGCCACACGATCCACCACCGCACCTGTTACATGCGTATTTATGGTTCGAGCCACTCATCGATCGTTGGCTGGCCGTCACCAAAACAATGGCGCTACAGCGCGTGCGAGCCGCCGTCGATCTGGATCGTCCGGTTGAAGGGGAACATCTCGTGAAGCATAGTACTTCATCAGTGGACACCGCAGCTTGTCTTTATCACATGAGATTGGTCTGGCGAGCTATTGGTGGAGCCGAGGAAGGTACTACTGGGGGCTCGCTGAGACTCCTTGAGGCAGCCTGTGCCACTGCACTCCACTACACCGACTTAGTCCACGGACAACTTGCCGATCAGGGATATTACGAGAACCACGGTCAAAACAAAACAACCGAGGAAATATGCACGATCGTGAATAATCTGGAGTACGTCCGACGCTCGCTCTCTGAGTACGACGATGAACACATTGCCAGCGATGAGAACTCCCGTCAGCTAGTGCGCGGTGCTCTGGGTACTCTGGACGCGCGATCCGCTCGTGCTGCCGCCCCGCTGGCCGCAAGAGCACGGCCACCTCTACGCAAGGCCGTGTTCCATCTAGCGTGGTCACCTGACACGCTACCTACCATACAGGCCATAACTCCACTTTTGGAGTTCCTAGACCAGCACCTGTCAGCGTTGAATACATGGCTGCTTCCCCGTGCCTTCCTCCGAGCTCTTGCTGGTTGCTGGAGCGCCGTACTCAAGGAAGTGTCAACACAAGCTGATGCTGGAGGCGCTGAGAGACCTAGGGTGTACCATCACAGACTGAGAGAGGCTCTTGACTTACTCGCCGAGTTCTTCCACGCTGAAGGAAAAGGTCTCCCGATGACAGACGTCCACAACTTGGAATGGGGTCGCGTAGAGCAACGCATGCAGTATCATCAGGCACCGACTGAGGAGTTGCTCGAATTATGGCTCGCCGATAGACTGGCTGAGCAGGCTCGGACACCAATGCCTTCGCCATATGGATCTATACTTGTCAGAGTGTATTTCAACCACGACTCGCTCTGCGTGGAGGTGTTGTCCGCGCGTGACGTGATCCCCCTGGACCCGAACGGCCTCAGTGATCCGTTCGTAGTGCTCGAACTTCTTCCGAAGCGACTCTTCCCTAAAGCCCACGAACAAAGCACAAATGTTCAGAAGAAAACTCTGAACCCCGTGTGGGACGAGTGCTTCGAGTTCGCGGTGTCGTTGGAGTCGTGTCGGTCGTCGCAAGCGGCGCTCGCTCTGTCCGTGTGGGACCGGGACGTCTTGACTGCCGACGACTTCGCCGGTGAGGCGTTCATTCCGCTGTCGCGCGTCCCCGGGGTGCACACTCACGCGCCCCCCGACCCCCTGCGTCCCGTCGAGCTGCCCCTCATGCAGCTCCATGACAGGAATCATCCGATATTGCAGATACTGGAATCTCGCACCACCGATAAGTTCGCCATGGATTTCGTTAAAAAACAAAAATTGCGTTTTGCTGAACAGTAA
Protein
MSFLTSLGQYVAGVADSVAGLALSPRRAPPSRHRSAEEGQAQQPPPSTATMRGFPRVLPTEGASALGARRRTLDCLAPAPAQRRGGSLRVPRHQAPPEKPTMAFCKRRLSWPEVDNSVNSGVQDTDGSYFESFTALSWRQENRRLAALRLAEARAERPPPMPQDLGLPSVSAQLSHKEHEHLYTEVLYCIENAVGAPAPDGQFAAYKEEVIEYARRAFRISQEVHARAIRAAGSERPPTVVLGCSVIEADGLEAKDANGFSDPYCMLGIQPASLPASPRASEDEGRKHGFRLSFKRRDGRQQRDSLGRLPARYIRATSVRPHTLSPKWNETFKFDIDDISSDVLHLDIWDHDDESSVLDAVSRLNEVRGVRGLGRFFKQVCQSARQGSQDDFLGCVNIPLREIPSTGIEAWYKLEARSQRSSVQGRIRLRLWLSAREAGRHDDDNWQQVRQHERLFGVLLSYEVDTAGMVNVVEGEASSEWEGDLCGAAQTLLHQHAIQGDMSALQAAIARFAAACKLNCEAPLDPKYMYKLLTELERAWCASEAEVGSCAGESASGLSRDEERWLADCFGEFVERGLHQMRLHRDLYPVLHGNSLNKLEYLLRCLSQLSQMKAFWRCCPFNKEIRSEIVSSLRKGTSEWYEALCAQDTESERGEDLVNLITLVQIDLQQGLTYYHPLFEMTNNVPYFSVVFNQIDKMVTEDVRQCVEHWVGEGWCGVAEEELYDEHQNPMCIVSAKTLPFEVLSAVRELCAAAAPAPHSPHDPPPHLLHAYLWFEPLIDRWLAVTKTMALQRVRAAVDLDRPVEGEHLVKHSTSSVDTAACLYHMRLVWRAIGGAEEGTTGGSLRLLEAACATALHYTDLVHGQLADQGYYENHGQNKTTEEICTIVNNLEYVRRSLSEYDDEHIASDENSRQLVRGALGTLDARSARAAAPLAARARPPLRKAVFHLAWSPDTLPTIQAITPLLEFLDQHLSALNTWLLPRAFLRALAGCWSAVLKEVSTQADAGGAERPRVYHHRLREALDLLAEFFHAEGKGLPMTDVHNLEWGRVEQRMQYHQAPTEELLELWLADRLAEQARTPMPSPYGSILVRVYFNHDSLCVEVLSARDVIPLDPNGLSDPFVVLELLPKRLFPKAHEQSTNVQKKTLNPVWDECFEFAVSLESCRSSQAALALSVWDRDVLTADDFAGEAFIPLSRVPGVHTHAPPDPLRPVELPLMQLHDRNHPILQILESRTTDKFAMDFVKKQKLRFAEQ

Summary

EMBL
NWSH01000114    PCG79414.1    KQ459590    KPI97390.1    KQ461190    KPJ07154.1    + More
KQ971321    EFA00156.1    APGK01050981    APGK01050982    APGK01050983    APGK01050984    APGK01050985    APGK01050986    KB741180    ENN73131.1    CCAG010009843    CH916366    EDV95915.1    JRES01000493    KNC30788.1    CH379070    EAL30180.2    KRT08700.1    OUUW01000002    SPP77529.1    CH480817    EDW50811.1    CH940647    EDW68736.1    KRF83994.1    AE014296    AAF50588.4    AGB94199.1    JR038769    AEY58401.1    CH954178    EDV50502.1    CM000159    EDW93729.1    UFQT01000369    SSX23613.1    CH963847    EDW73391.2    CH902618    EDV40566.1    CVRI01000050    CRK99406.1    KQ981272    KYN43860.1    KQ982691    KYQ52210.1    KB631768    ERL85992.1    KQ980765    KYN13360.1    KQ414855    KOC60100.1    KQ976749    KYN08772.1    QOIP01000001    RLU26872.1    KQ976641    KYM78810.1    CM002912    KMY98048.1    ADTU01006076    ADTU01006077    ADTU01006078    ADTU01006079    ADTU01006080    GEZM01072759    JAV65410.1    KK852721    KDR17747.1    CP012525    ALC44409.1    AAAB01008960    EAA11102.4    CH933816    EDW17233.2    CM000363    EDX09538.1    KK107242    EZA54548.1    GL449799    EFN81951.1    KQ435841    KOX71305.1    BT011431    AAR99089.1    ATLV01022998    KE525339    KFB48238.1    EDO63740.1    KQ761906    OAD56453.1    ABLF02034728    ABLF02034739    ABLF02034740    ABLF02057270    GFXV01000680    MBW12485.1    GL762140    EFZ21915.1    AXCM01010389    ADMH02001139    ETN63965.1    AXCN02000446    APCN01000131    GGMS01007130    MBY76333.1    JXUM01091842    JXUM01091843    KQ563946    KXJ73031.1    CH477250    EAT46054.1    JXJN01019032    JXJN01019033    JXJN01019034    DS231945    EDS28323.1    CH479244    EDW37712.1    DS235149    EEB12523.1    GL732524    EFX89361.1    NEVH01007814    PNF35637.1    LBMM01001340    KMQ96482.1    NEDP02004422    OWF45641.1    PZQS01000001    PVD39324.1    KB202953    ESO87159.1    GEGO01002562    JAR92842.1    JH818302    EKC23238.1    AMQN01007080    KB299905    ELU07462.1    GGLE01003042    MBY07168.1    ABJB010047782    ABJB010056371    ABJB010060520    ABJB010093577    ABJB010181485    ABJB010222402    ABJB010363018    ABJB010448035    ABJB010514674    ABJB010582315    DS758678    EEC08524.1    HACA01004114    CDW21475.1    AHAT01029956    AHAT01029957   
Pfam
PF00168   C2        + More
PF10540   Membr_traf_MHD
PF01963   TraB
PF00144   Beta-lactamase
Interpro
IPR035892   C2_domain_sf        + More
IPR014770   Munc13_1       
IPR014772   Munc13_dom-2       
IPR000008   C2_dom       
IPR019558   Munc13_subgr_dom-2       
IPR002816   TraB_fam       
IPR012338   Beta-lactam/transpept-like       
IPR001466   Beta-lactam-related       
SUPFAM
SSF56601   SSF56601       
Gene 3D
PDB
3PFQ     E-value=1.23573e-13,     Score=190

Ontologies

Topology

Length:
1253
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04254
Exp number, first 60 AAs:
0.04169
Total prob of N-in:
0.00209
outside
1  -  1253
 
 

Population Genetic Test Statistics

Pi
246.957178
Theta
17.875249
Tajima's D
0.839092
CLR
0.555553
CSRT
0.620018999050048
Interpretation
Uncertain
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