Gene

KWMTBOMO06643  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011779

Annotation

PREDICTED:_probable_prefoldin_subunit_4_[Plutella_xylostella]

Location

Bomo_Chr11(-):12030648-12032201      View in EpiBrowser

Full name

Prefoldin subunit 4      

Location in the cell

Cytoplasmic   Reliability : 1.98 Nuclear   Reliability : 2.381

CDS

ATGTCAACTACAGCTAAAGGAACTTTTCAGCCAGACTCTGATGTACACATTTCATATGAAGATCAACAAAAAATTAACAAGTTTGCTCGTCTCAATGCTAAAGTTGACGATTATAAGGATGAGCTCAAAGTAAAACAAAACGATGTAAAGAACCTAGAAGAAGCAGTTGAGGAACTGAGCCTTGCTGATGATTCTGAAAAAATCCCTTACCTTATTGGTGAAATTTTTATTTGTCAGAATTTGGAAATTACTTTGAAAAATCTTGAGGAAGCTAAAGCAAAAAAAATACATGAAATTCATGATTTAGAAGAAAAATGTGAGGAACTAAAATCACAAATGAGTGACTTGAAAGCACACTTGTATGGAAAATTTGGTAGCCACATTAACTTGGAAAATGAGGAAGATTGA

Protein

MSTTAKGTFQPDSDVHISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIPYLIGEIFICQNLEITLKNLEEAKAKKIHEIHDLEEKCEELKSQMSDLKAHLYGKFGSHINLENEED

Description

Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins.

Subunit

Heterohexamer of two PFD-alpha type and four PFD-beta type subunits.

Similarity

Belongs to the prefoldin subunit beta family.

Uniprot

H9JQH3   A0A2A4JBT4   A0A2H1VXB2   S4PMN4   A0A3S2NW85   A0A212ELI2   + More
A0A194QQC4   I4DLD8   A0A0L7L117   D6X221   A0A2J7Q722   V5I7Y6   U4UKA1   A0A067R1Q5   N6SV95   J3JXB8   E2BHI5   A0A195CTQ6   R4UKZ0   A0A1B6MDB0   A0A232EYK4   K7JAQ8   A0A2S2NGK1   C4WSI6   A0A0V0G5R6   A0A224XZW6   A0A0T6B6I4   A0A1L8DU37   A0A0P4VK23   U5EZA6   T1DHD4   A0A2M3Z6Z5   A0A1B6HCG7   A0A182WWI6   A0A182UPF3   A0A182JRP3   A0A182I6R7   A0A0N0U709   A0A182MCN7   A0A182WBI9   A0A182SL99   A0A182UDD8   A0A1Q3FBZ0   A0A182Y2C2   Q7QIM0   A0A182PII6   A0A1B6G7J4   R4WT38   W5JV23   A0A182FEL8   A0A2M4C2Z2   A0A0L7QQ59   A0A1B0D5V5   A0A1W4WHZ9   A0A2M4AGV2   A0A182RJL6   A0A195BP16   A0A195FR15   A0A158NTS0   A0A151WX69   A0A0J7NNA4   A0A182QFC1   A0A026W939   F4WJ11   A0A182HA99   Q17IJ1   A0A151J594   B0W5L5   A0A151JNR5   A0A0K8TP25   A0A182N9A1   A0A1Y1KJW0   A0A3L8DA49   A0A1S3DCZ7   A0A2A3EG24   V9ILX5   A0A088ATX6   A0A1B0GII4   A0A182JEN9   A0A336N5J2   A0A1B6DQ76   A0A084W148   T1GKH0   T1J251   B4PIT1   A0A336L8G3   T1HUH4   B3NGB1   A0A0L0CCD3   W8B6K5   B4MM11   A0A3B0JW25   Q2LZL9   B4H3B9   A0A0K8UTS8   A0A034VEH7   B4IX17   A0A1A9UP26   B3M3Q7   B4KXE6  

Pubmed

19121390    23622113    22118469    26354079    22651552    26227816    + More
18362917    19820115    23537049    24845553    22516182    20798317    28648823    20075255    27129103    25244985    12364791    14747013    17210077    23691247    20920257    23761445    21347285    24508170    21719571    26483478    17510324    26369729    28004739    30249741    24438588    17994087    17550304    26108605    24495485    15632085    25348373   

EMBL

BABH01011997    NWSH01002234    PCG68863.1    ODYU01005003    SOQ45448.1    GAIX01003465    + More
JAA89095.1    RSAL01000137    RVE46195.1    AGBW02014056    AGBW02013014    OWR42345.1    OWR44092.1    KQ461190    KPJ07160.1    AK402106    KQ459590    BAM18728.1    KPI97385.1    JTDY01003664    KOB69188.1    KQ971371    EFA09930.1    NEVH01017447    PNF24379.1    GALX01005620    JAB62846.1    KB632254    ERL90616.1    KK852777    KDR16741.1    APGK01055197    KB741261    ENN71604.1    BT127887    AEE62849.1    GL448301    EFN84838.1    KQ977279    KYN04050.1    KC740980    AGM32804.1    GEBQ01006060    JAT33917.1    NNAY01001609    OXU23441.1    AAZX01016257    GGMR01003666    MBY16285.1    ABLF02021773    AK340205    BAH70856.1    GECL01002787    JAP03337.1    GFTR01002236    JAW14190.1    LJIG01009497    KRT82962.1    GFDF01004131    JAV09953.1    GDKW01001959    JAI54636.1    GANO01001139    JAB58732.1    GAMD01002416    JAA99174.1    GGFM01003524    MBW24275.1    GECU01035375    JAS72331.1    APCN01003693    KQ435724    KOX78382.1    AXCM01000934    GFDL01009975    JAV25070.1    AAAB01008807    EAA04281.3    GECZ01011369    JAS58400.1    AK417892    BAN21107.1    ADMH02000413    ETN66629.1    GGFJ01010523    MBW59664.1    KQ414806    KOC60626.1    AJVK01000400    GGFK01006621    MBW39942.1    KQ976435    KYM87097.1    KQ981382    KYN42349.1    ADTU01026117    KQ982673    KYQ52438.1    LBMM01003082    KMQ93990.1    AXCN02000558    KK107348    EZA52151.1    GL888181    EGI65781.1    JXUM01122301    KQ566589    KXJ69990.1    CH477239    EAT46478.1    KQ980025    KYN18204.1    DS231843    EDS35498.1    KQ978878    KYN27858.1    GDAI01001476    JAI16127.1    GEZM01081333    JAV61699.1    QOIP01000010    RLU17375.1    KZ288255    PBC30670.1    JR051397    AEY61491.1    AJWK01014150    UFQT01002611    SSX33768.1    GEDC01009478    JAS27820.1    ATLV01019208    KE525264    KFB43942.1    CAQQ02394204    JH431796    CM000159    EDW93501.1    UFQS01001300    UFQT01001300    SSX10175.1    SSX29896.1    ACPB03012087    CH954178    EDV51012.1    JRES01000611    KNC29891.1    GAMC01013897    JAB92658.1    CH963847    EDW73020.1    OUUW01000002    SPP76921.1    CH379069    EAL29488.1    CH479206    EDW30859.1    GDHF01022391    JAI29923.1    GAKP01017271    GAKP01017270    JAC41681.1    CH916366    EDV96323.1    CH902618    EDV40350.1    CH933809    EDW18632.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053240    UP000053268    + More
UP000037510    UP000007266    UP000235965    UP000030742    UP000027135    UP000019118    UP000008237    UP000078542    UP000215335    UP000002358    UP000007819    UP000076407    UP000075903    UP000075881    UP000075840    UP000053105    UP000075883    UP000075920    UP000075901    UP000075902    UP000076408    UP000007062    UP000075885    UP000000673    UP000069272    UP000053825    UP000092462    UP000192223    UP000075900    UP000078540    UP000078541    UP000005205    UP000075809    UP000036403    UP000075886    UP000053097    UP000007755    UP000069940    UP000249989    UP000008820    UP000078492    UP000002320    UP000075884    UP000279307    UP000079169    UP000242457    UP000005203    UP000092461    UP000075880    UP000030765    UP000015102    UP000002282    UP000015103    UP000008711    UP000037069    UP000007798    UP000268350    UP000001819    UP000008744    UP000001070    UP000078200    UP000007801    UP000009192   

PRIDE

H9JQH3   

Pfam

PF01920   Prefoldin_2        + More
PF01746   tRNA_m1G_MT

Interpro

IPR009053   Prefoldin        + More
IPR002777   PFD_beta-like       
IPR016661   PFDN4       
IPR038459   MT_TRM10-typ_sf       
IPR016009   tRNA_MeTrfase_TRMD/TRM10       
IPR007356   tRNA_m1G_MeTrfase_euk       
IPR025812   TRM10C       
IPR028564   MT_TRM10-typ       

Gene 3D

1.10.287.370     3.40.1280.30    

ProteinModelPortal

H9JQH3   A0A2A4JBT4   A0A2H1VXB2   S4PMN4   A0A3S2NW85   A0A212ELI2   + More
A0A194QQC4   I4DLD8   A0A0L7L117   D6X221   A0A2J7Q722   V5I7Y6   U4UKA1   A0A067R1Q5   N6SV95   J3JXB8   E2BHI5   A0A195CTQ6   R4UKZ0   A0A1B6MDB0   A0A232EYK4   K7JAQ8   A0A2S2NGK1   C4WSI6   A0A0V0G5R6   A0A224XZW6   A0A0T6B6I4   A0A1L8DU37   A0A0P4VK23   U5EZA6   T1DHD4   A0A2M3Z6Z5   A0A1B6HCG7   A0A182WWI6   A0A182UPF3   A0A182JRP3   A0A182I6R7   A0A0N0U709   A0A182MCN7   A0A182WBI9   A0A182SL99   A0A182UDD8   A0A1Q3FBZ0   A0A182Y2C2   Q7QIM0   A0A182PII6   A0A1B6G7J4   R4WT38   W5JV23   A0A182FEL8   A0A2M4C2Z2   A0A0L7QQ59   A0A1B0D5V5   A0A1W4WHZ9   A0A2M4AGV2   A0A182RJL6   A0A195BP16   A0A195FR15   A0A158NTS0   A0A151WX69   A0A0J7NNA4   A0A182QFC1   A0A026W939   F4WJ11   A0A182HA99   Q17IJ1   A0A151J594   B0W5L5   A0A151JNR5   A0A0K8TP25   A0A182N9A1   A0A1Y1KJW0   A0A3L8DA49   A0A1S3DCZ7   A0A2A3EG24   V9ILX5   A0A088ATX6   A0A1B0GII4   A0A182JEN9   A0A336N5J2   A0A1B6DQ76   A0A084W148   T1GKH0   T1J251   B4PIT1   A0A336L8G3   T1HUH4   B3NGB1   A0A0L0CCD3   W8B6K5   B4MM11   A0A3B0JW25   Q2LZL9   B4H3B9   A0A0K8UTS8   A0A034VEH7   B4IX17   A0A1A9UP26   B3M3Q7   B4KXE6  

KEGG

101737652    K09550 prefoldin subunit 4 | (RefSeq) probable prefoldin subunit 4

GO

GO:0016272   GO:0006457   GO:0051082   GO:0005737   GO:0008033   GO:0008168   GO:0005739   GO:0016021   GO:0006812   GO:0015299   GO:0006811   GO:0016020   GO:0005634   GO:0006260  

PANTHER

PTHR21100   PTHR13563   PTHR13563:SF5  

Length:

135

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00127

Exp number, first 60 AAs:

0

Total prob of N-in:

0.29926

outside

1  -  135

 

 

Pi

147.509206

Theta

147.374144

Tajima's D

-0.798856

CLR

468.522874

CSRT

0.175791210439478

Interpretation

Uncertain