Gene

KWMTBOMO06639  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002353

Annotation

lysophospholipase_[Bombyx_mori]

Location

Bomo_Chr11(-):11987653-11990091      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.872

CDS

ATGGAACCAAATCCAGTAATAATCGCCGCACAGGCTAGACATACAGCATCGCTTATATTTTTACACGGTTTGGGTGACACCGGTCATGGATGGGCAAGCACGATTGCTGGCATCAGAGGCCCTCATGTCAAAGTTATATGTCCTACGGCTTCGACTATGCCCGTGACGCTCAACAACGGTTTCCGTATGCCCTCGTGGTTTGATTTAAGAACGCTGGACGCTACAGCTCCTGAAGATGAAGAAGGTATTGAGAGAGCCACTGATCTCGTCCATGGGTTGATTGCTGATGAAGTTAAAGCCGGTGTGCCTGCAGATAAAGTTCTGCTTGGTGGTTTCTCTCAAGGTGGAGCATTAGCTCTATATGCTGCGCTTACATATCCTGAGAGATTAGCAGGAGTCATGTCCCTATCCTGCTGGCTACCTCGACATGGTTATTTCCCTGGAGGCTTAAAGGCTCCTGTTGATTTACCAATATTCCAAGCTCATGGTGATAAGGACCCAGTTGTATCTTTCAAATGGGGACAAATGACGGCATCATGCCTCAAGACATTTATGAAAAATGTTAAATTTTCAACATACCAAGGACTCGCACATAGCTCATCCATTGCCGAACTCAAAGACATGCAAGAATTTATAGAAAAGACCCTGCCAGCATCAAAGTAA

Protein

MEPNPVIIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSWFDLRTLDATAPEDEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGALALYAALTYPERLAGVMSLSCWLPRHGYFPGGLKAPVDLPIFQAHGDKDPVVSFKWGQMTASCLKTFMKNVKFSTYQGLAHSSSIAELKDMQEFIEKTLPASK

Uniprot

Q2F5Q1   H9IYL9   A0A3S2NQU5   A0A212FDE5   S4P8A3   D5IES7   + More
A0A194QNS0   I4DK24   I4DMT5   A0A2A4JFE1   A0A2H1X153   A0A0L7LLQ7   E0VAT2   A0A1W4XU67   A0A1Q3FFW0   A0A067QR62   Q16VJ7   V5GMI0   D6W6B5   A0A088AHK0   T1D4P3   A0A336K686   U5EXF0   A0A232F028   K7IYN4   A0A1B6GVW1   A0A2A3EC10   V9IMH8   B0WLE2   A0A023EJY5   E2AJB6   A0A151XCY3   A0A1L8DQ44   F4WZP7   A0A158NGT9   A0A0K8TPS1   A0A026WCQ9   A0A1L8DPU0   A0A1B6IA90   A0A3L8D7U9   A0A0R1E248   A0A0R3P8A3   A0A195B7L2   A0A1B6DWN5   B4HAI5   Q2LZ68   A0A0J9RUS7   A0A1W4W6B5   A0A1Y1LTY6   A0A1W4VUA5   A0A0R1DX48   A0A0Q5U6I0   A0A0R3P547   B4MKQ2   B3NGY2   B4PFL7   A0A1Y1LQ15   B4QQ88   B4HEW2   A0A0Q9WXP2   A0A1W4W6V6   Q9I7R0   A0A0J9RTS7   C0PDF4   A0A3B0J9Y0   A0A0J9RTD3   M9PEW1   A0A0P8YGF8   C0PV64   A0A0Q9XE64   A0A171B407   A0A0P9C2X4   A0A0Q9XQ46   A0A0Q9XR58   B4J2J6   B3M4A0   A0A1I8N3E0   B4KUR2   A0A1I8PX20   A0A1I8M4X1   A0A1I8N3D8   A0A0Q9WW48   W8BFJ4   W8B0P5   A0A0A1WKF9   B4LCP7   A0A182Q6M7   A0A034VYX0   A0A034VTV0   W5JSH8   A0A0L0CGF2   T1PEM1   A0A0A1X2R0   A0A1I8JVX2   A0A2C9GQU5   A0A182UM23   A0A182TP24   A0A182KT69   Q7PZW9   A0A0T6B8R5  

Pubmed

19121390    22118469    23622113    26354079    22651552    26227816    + More
20566863    24845553    17510324    18362917    19820115    24330624    28648823    20075255    24945155    20798317    21719571    21347285    26369729    24508170    30249741    17994087    17550304    15632085    23185243    22936249    28004739    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25315136    24495485    25830018    25348373    20920257    23761445    26108605    20966253    12364791    14747013    17210077   

EMBL

DQ311372    ABD36316.1    BABH01043846    RSAL01000137    RVE46190.1    AGBW02009074    + More
OWR51750.1    GAIX01006031    JAA86529.1    GU073312    ADE75589.1    KQ461190    KPJ07162.1    AK401642    KQ459590    BAM18264.1    KPI97383.1    AK402603    BAM19225.1    NWSH01001612    PCG70691.1    ODYU01012587    SOQ58997.1    JTDY01000710    KOB76136.1    DS235015    EEB10488.1    GFDL01008612    JAV26433.1    KK853119    KDR11136.1    CH477589    EAT38599.1    GALX01005654    JAB62812.1    KQ971319    EFA11376.1    GALA01000868    JAA93984.1    UFQS01000131    UFQT01000131    SSX00229.1    SSX20609.1    GANO01002568    JAB57303.1    NNAY01001418    OXU24044.1    GECZ01003296    JAS66473.1    KZ288310    PBC28581.1    JR053908    AEY62042.1    DS231984    EDS30435.1    GAPW01004181    GEHC01000239    JAC09417.1    JAV47406.1    GL439972    EFN66437.1    KQ982294    KYQ58213.1    GFDF01005587    JAV08497.1    GL888480    EGI60322.1    ADTU01015210    GDAI01001708    JAI15895.1    KK107314    EZA52834.1    GFDF01005586    JAV08498.1    GECU01023926    JAS83780.1    QOIP01000012    RLU16341.1    CM000159    KRK01681.1    KRK01682.1    KRK01683.1    CH379069    KRT08237.1    KRT08239.1    KQ976574    KYM80235.1    GEDC01007200    JAS30098.1    CH479240    EDW37583.1    EAL29641.3    CM002912    KMY99028.1    KMY99029.1    KMY99030.1    GEZM01049950    GEZM01049948    JAV75740.1    KRK01680.1    CH954178    KQS43804.1    KRT08235.1    KRT08236.1    KRT08238.1    KRT08240.1    CH963847    EDW72758.2    EDV51439.2    KQS43805.1    EDW94166.2    KRK01684.1    GEZM01049949    JAV75739.1    CM000363    EDX10106.1    CH480815    EDW41131.1    KRF97630.1    AE014296    AY094672    AAG22322.1    AAM11025.1    KMY99027.1    BT066323    ACN32199.1    AGB94412.1    OUUW01000002    SPP76782.1    KMY99026.1    KMY99031.1    AGB94413.1    CH902618    KPU78022.1    KPU78025.1    BT072920    ACN81341.1    CH933809    KRG06597.1    GEMB01000301    JAS02817.1    KPU78023.1    KRG06599.1    KRG06600.1    CH916366    EDV97081.1    EDV39370.2    KPU78021.1    KPU78024.1    EDW19318.2    KRG06596.1    KRG06598.1    CH940647    KRF85198.1    GAMC01014516    GAMC01014514    GAMC01014512    JAB92041.1    GAMC01014518    JAB92037.1    GBXI01015429    JAC98862.1    EDW70939.2    KRF85199.1    KRF85200.1    AXCN02001699    GAKP01012242    GAKP01012239    GAKP01012232    JAC46713.1    GAKP01012243    GAKP01012241    GAKP01012238    GAKP01012236    GAKP01012235    JAC46711.1    ADMH02000596    ETN65714.1    JRES01000502    KNC30574.1    KA647232    AFP61861.1    GBXI01008668    JAD05624.1    APCN01003267    AAAB01008986    EAA00208.4    LJIG01009151    KRT83653.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053240    UP000053268    UP000218220    + More
UP000037510    UP000009046    UP000192223    UP000027135    UP000008820    UP000007266    UP000005203    UP000215335    UP000002358    UP000242457    UP000002320    UP000000311    UP000075809    UP000007755    UP000005205    UP000053097    UP000279307    UP000002282    UP000001819    UP000078540    UP000008744    UP000192221    UP000008711    UP000007798    UP000000304    UP000001292    UP000000803    UP000268350    UP000007801    UP000009192    UP000001070    UP000095301    UP000095300    UP000008792    UP000075886    UP000000673    UP000037069    UP000076407    UP000075840    UP000075903    UP000075902    UP000075882    UP000007062   

PRIDE

Q2F5Q1    H9IYL9    Q9I7R0    C0PDF4    C0PV64   

Pfam

PF02230   Abhydrolase_2

Interpro

IPR029058   AB_hydrolase        + More
IPR003140   PLipase/COase/thioEstase       

SUPFAM

SSF53474   SSF53474       

Gene 3D

3.40.50.1820    

ProteinModelPortal

Q2F5Q1   H9IYL9   A0A3S2NQU5   A0A212FDE5   S4P8A3   D5IES7   + More
A0A194QNS0   I4DK24   I4DMT5   A0A2A4JFE1   A0A2H1X153   A0A0L7LLQ7   E0VAT2   A0A1W4XU67   A0A1Q3FFW0   A0A067QR62   Q16VJ7   V5GMI0   D6W6B5   A0A088AHK0   T1D4P3   A0A336K686   U5EXF0   A0A232F028   K7IYN4   A0A1B6GVW1   A0A2A3EC10   V9IMH8   B0WLE2   A0A023EJY5   E2AJB6   A0A151XCY3   A0A1L8DQ44   F4WZP7   A0A158NGT9   A0A0K8TPS1   A0A026WCQ9   A0A1L8DPU0   A0A1B6IA90   A0A3L8D7U9   A0A0R1E248   A0A0R3P8A3   A0A195B7L2   A0A1B6DWN5   B4HAI5   Q2LZ68   A0A0J9RUS7   A0A1W4W6B5   A0A1Y1LTY6   A0A1W4VUA5   A0A0R1DX48   A0A0Q5U6I0   A0A0R3P547   B4MKQ2   B3NGY2   B4PFL7   A0A1Y1LQ15   B4QQ88   B4HEW2   A0A0Q9WXP2   A0A1W4W6V6   Q9I7R0   A0A0J9RTS7   C0PDF4   A0A3B0J9Y0   A0A0J9RTD3   M9PEW1   A0A0P8YGF8   C0PV64   A0A0Q9XE64   A0A171B407   A0A0P9C2X4   A0A0Q9XQ46   A0A0Q9XR58   B4J2J6   B3M4A0   A0A1I8N3E0   B4KUR2   A0A1I8PX20   A0A1I8M4X1   A0A1I8N3D8   A0A0Q9WW48   W8BFJ4   W8B0P5   A0A0A1WKF9   B4LCP7   A0A182Q6M7   A0A034VYX0   A0A034VTV0   W5JSH8   A0A0L0CGF2   T1PEM1   A0A0A1X2R0   A0A1I8JVX2   A0A2C9GQU5   A0A182UM23   A0A182TP24   A0A182KT69   Q7PZW9   A0A0T6B8R5  

PDB

5SYM     E-value=1.083e-55,     Score=545

KEGG

692950    K06130 lysophospholipase II [EC:3.1.1.5] | (RefSeq) lysophospholipase

PATHWAY

00564    Glycerophospholipid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016787   GO:0080030   GO:0002084   GO:0005737   GO:0008474   GO:0052689   GO:0016021   GO:0008270   GO:0008603   GO:0008026   GO:0005524   GO:0005234   GO:0006811   GO:0016020   GO:0005634   GO:0006260  

Length:

220

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.27451

Exp number, first 60 AAs:

0.05046

Total prob of N-in:

0.03917

outside

1  -  220

 

 

Pi

232.188469

Theta

181.749871

Tajima's D

0.944622

CLR

0

CSRT

0.648417579121044

Interpretation

Uncertain