Gene

KWMTBOMO06627

Pre Gene Modal

BGIBMGA011692

Annotation

PREDICTED:_protein_SGT1_homolog_ecdysoneless_[Bombyx_mori]

Location

Bomo_Chr11(+):11848953-11850758      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.54

CDS

ATGCATTTAATTAATGTAACATGTTTTGGTGACAATATTGAAGATGAATGGTTCATAGTTTACCTTGTAAAAAATATAACAAAGCTATACACTAACATAGTTGTACAAATTAAAGACAGTGATGGTGAATTTTTATTAATAGAAGCTGCAAATTATTTGCCTTCATGGGCAAATTCAAATACTACAGAAAATAGAGTGTTCATTTACAACAACAATTTACATATAATACCTCCACATGTGGCAAGTATAGATGAGAAGTTAGAAATATCAGAAGCATTAAAATACTTGGAAATCAATAAAGACACTAAGTCAACACATGAAATTGAAAATGCTATATCGTTAAGAATTGAGAAGTTTTCTAAACATTTAAGTGATTATTTCCATACATCAGTTGTTAGACTTCCAATAGAGATGATAACGATGACTGGATGA

Protein

MHLINVTCFGDNIEDEWFIVYLVKNITKLYTNIVVQIKDSDGEFLLIEAANYLPSWANSNTTENRVFIYNNNLHIIPPHVASIDEKLEISEALKYLEINKDTKSTHEIENAISLRIEKFSKHLSDYFHTSVVRLPIEMITMTG

Uniprot

H9JQ86   A0A194PX78   I4DQ65   A0A212EM53   A0A212FDB3   A0A194QP97   + More
S4PJJ8   A0A2A4JKI8   A0A3S2LPS0   A0A2H4WW85   A0A2H1VP19   A0A1Y1ML86   A0A1A8K967   A0A1W4ZV86   A0A2H8U101   A0A1A8U3A7   T1K5C8   A0A1A8GJA7   A0A1B6FGT8   A0A1A8G7V3   A0A1A8Q4F0   A0A1A7YY65   A0A1A7WHQ5   A0A1A8LYS4   A0A1A8BPU4   A0A2S2NJB4   A0A1A8PUG6   A0A1A8S4Q1   A0A091SAW5   A0A1A7ZFV6   A0A2S2NNP4   J9JPF7   D6WF00   A0A1A8D4Q1   A0A3Q3KGT0   A0A3B3BTZ7   A0A091GLL6   A0A3Q1I7P7   A0A1B6D498   A0A3P9KNS1   A0A3P9JIJ1   A0A093BD20   A0A2G8LHF6   A0A1I8N0Z9   A0A3B4EE71   A0A3Q2E9U0   A0A1B6EM34   A0A0Q3T623   A0A0A9XSY8   A0A0A1X4Z5   A0A3Q3MKZ6   A0A3P8UTK7   A0A2S2QU19   A0A0L0CH30   A0A218U6U9   F6WLA1   F6WL91   T1PEQ4   A0A3B4ZK78   A0A147BD71   A0A147BD72   A0A1I8NLL6   F1NG67   A0A224X985   A0A3P8S4M1   A0A1V4K535   A0A3Q0RJA8   A0A131XYG9   A0A0V0G7K6   Q7SXQ4   I3IWE8   A0A3P9DRB6   A0A023F1B7   K1R4R8   G3P7G7   A0A3B4EXK4   I3IWE7   A0A226N8C8   M3XJK2   A0A3P8QQJ9   A0A3P8QSP8   A0A3P9DRN4   A0A3Q2ZUW4   A0A1A9W5S2   A0A3Q3W7S2   A0A093IGT3   A0A3Q4AZH6   H3AJU0   E0VL55   A0A3B3R333   A0A3N2Q7L9   A0A3M0KKR9   U4UJW1   N6T3Q8   F1QAN3   A0A226P5A2   A0A3B4XYP0  

Pubmed

19121390    26354079    22651552    22118469    23622113    28004739    + More
18362917    19820115    29451363    17554307    29023486    25315136    25401762    26823975    25830018    24487278    26108605    18464734    29652888    15592404    25186727    25474469    22992520    9215903    20566863    29240929    30368956    23537049    23594743    24621616   

EMBL

BABH01012010    BABH01012011    KQ459590    KPI97369.1    AK403955    BAM20055.1    + More
AGBW02013918    OWR42563.1    AGBW02009074    OWR51736.1    KQ461190    KPJ07174.1    GAIX01004925    JAA87635.1    NWSH01001177    PCG72238.1    RSAL01000414    RVE41829.1    KY514088    AUD12119.1    ODYU01003588    SOQ42548.1    GEZM01028105    JAV86462.1    HAEE01008797    SBR28847.1    GFXV01008065    MBW19870.1    HAEJ01001131    SBS41588.1    CAEY01001585    HAEC01003029    SBQ71106.1    GECZ01020372    JAS49397.1    HAEB01021263    SBQ67790.1    HAEG01010902    SBR88338.1    HADX01012859    SBP35091.1    HADW01004092    SBP05492.1    HAEF01010056    SBR49668.1    HADZ01004740    SBP68681.1    GGMR01004636    MBY17255.1    HAEH01008668    SBR85110.1    HAEI01011390    SBS13241.1    KK947587    KFQ55658.1    HADY01003217    SBP41702.1    GGMR01006176    MBY18795.1    ABLF02038060    ABLF02038062    KQ971319    EFA01447.1    HAEA01000735    SBQ29215.1    KL448307    KFO82206.1    GEDC01016769    JAS20529.1    KN126311    KFU88688.1    MRZV01000076    PIK59671.1    GECZ01030805    JAS38964.1    LMAW01002878    KQK76182.1    GBHO01023394    GBHO01004184    GBHO01004180    GDHC01021264    GDHC01018009    JAG20210.1    JAG39420.1    JAG39424.1    JAP97364.1    JAQ00620.1    GBXI01008502    JAD05790.1    GGMS01012038    MBY81241.1    JRES01000493    KNC30799.1    MUZQ01001048    OWK49449.1    AAPN01305742    AAPN01305743    AAPN01305744    AAPN01305745    AAPN01305746    AAPN01305747    KA647179    AFP61808.1    GEGO01006687    JAR88717.1    GEGO01006681    JAR88723.1    AADN05000334    GFTR01007509    JAW08917.1    LSYS01004468    OPJ79473.1    GEFM01003737    JAP72059.1    GECL01002171    JAP03953.1    BC055498    AAH55498.1    AERX01001515    GBBI01003906    JAC14806.1    JH818314    EKC40763.1    MCFN01000142    OXB63834.1    AFYH01171881    AFYH01171882    AFYH01171883    AFYH01171884    KL215648    KFV65931.1    DS235269    EEB14111.1    ML119051    ROT42706.1    QRBI01000108    RMC11824.1    KB632387    ERL94349.1    APGK01053677    KB741231    ENN72248.1    BX005375    BX323986    AWGT02000171    OXB74667.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000053240    UP000218220    UP000283053    + More
UP000192224    UP000015104    UP000007819    UP000007266    UP000261600    UP000261560    UP000053760    UP000265040    UP000265180    UP000265200    UP000230750    UP000095301    UP000261440    UP000265020    UP000051836    UP000261640    UP000265120    UP000037069    UP000197619    UP000002279    UP000261400    UP000095300    UP000000539    UP000265080    UP000190648    UP000261340    UP000005207    UP000265160    UP000005408    UP000007635    UP000261460    UP000198323    UP000008672    UP000265100    UP000264800    UP000091820    UP000261620    UP000053875    UP000009046    UP000261540    UP000272025    UP000269221    UP000030742    UP000019118    UP000000437    UP000198419    UP000261360   

PRIDE

H9JQ86   

Pfam

PF07093   SGT1

Interpro

IPR010770   Ecd        + More
IPR029071   Ubiquitin-like_domsf       

SUPFAM

SSF54236   SSF54236       

ProteinModelPortal

H9JQ86   A0A194PX78   I4DQ65   A0A212EM53   A0A212FDB3   A0A194QP97   + More
S4PJJ8   A0A2A4JKI8   A0A3S2LPS0   A0A2H4WW85   A0A2H1VP19   A0A1Y1ML86   A0A1A8K967   A0A1W4ZV86   A0A2H8U101   A0A1A8U3A7   T1K5C8   A0A1A8GJA7   A0A1B6FGT8   A0A1A8G7V3   A0A1A8Q4F0   A0A1A7YY65   A0A1A7WHQ5   A0A1A8LYS4   A0A1A8BPU4   A0A2S2NJB4   A0A1A8PUG6   A0A1A8S4Q1   A0A091SAW5   A0A1A7ZFV6   A0A2S2NNP4   J9JPF7   D6WF00   A0A1A8D4Q1   A0A3Q3KGT0   A0A3B3BTZ7   A0A091GLL6   A0A3Q1I7P7   A0A1B6D498   A0A3P9KNS1   A0A3P9JIJ1   A0A093BD20   A0A2G8LHF6   A0A1I8N0Z9   A0A3B4EE71   A0A3Q2E9U0   A0A1B6EM34   A0A0Q3T623   A0A0A9XSY8   A0A0A1X4Z5   A0A3Q3MKZ6   A0A3P8UTK7   A0A2S2QU19   A0A0L0CH30   A0A218U6U9   F6WLA1   F6WL91   T1PEQ4   A0A3B4ZK78   A0A147BD71   A0A147BD72   A0A1I8NLL6   F1NG67   A0A224X985   A0A3P8S4M1   A0A1V4K535   A0A3Q0RJA8   A0A131XYG9   A0A0V0G7K6   Q7SXQ4   I3IWE8   A0A3P9DRB6   A0A023F1B7   K1R4R8   G3P7G7   A0A3B4EXK4   I3IWE7   A0A226N8C8   M3XJK2   A0A3P8QQJ9   A0A3P8QSP8   A0A3P9DRN4   A0A3Q2ZUW4   A0A1A9W5S2   A0A3Q3W7S2   A0A093IGT3   A0A3Q4AZH6   H3AJU0   E0VL55   A0A3B3R333   A0A3N2Q7L9   A0A3M0KKR9   U4UJW1   N6T3Q8   F1QAN3   A0A226P5A2   A0A3B4XYP0  

KEGG

105842382    no KO assigned | (RefSeq) protein SGT1 homolog ecdysoneless

GO

GO:0005634   GO:0045944   GO:0008283   GO:0005829   GO:0005654   GO:0035035   GO:2000045  

PANTHER

PTHR13060  

Length:

143

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0178

Exp number, first 60 AAs:

0.01691

Total prob of N-in:

0.10476

outside

1  -  143

 

 

Pi

122.105658

Theta

137.551042

Tajima's D

-0.962168

CLR

141.899756

CSRT

0.146092695365232

Interpretation

Uncertain