Gene

KWMTBOMO06623

Pre Gene Modal

BGIBMGA011690

Annotation

PREDICTED:_YTH_domain-containing_protein_1_[Amyelois_transitella]

Location

Bomo_Chr11(+):11810813-11812330      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.678

CDS

ATGGAGACCTCTAACAACACAGACGCCGTCAACCTTGGTGTTGGTGAAGTGGAAGCAGAAATCGGAGAGGAACTCAAACAGTTAGAGGAAGGTAAAGATTATGATACACGCAGTGAAGTATCTAGTTCTTCATCAAGTGGATCAAGTTCACCAAGCATAAGTTCTGCCAGCACTAAATCCAAGGAAAGTCGTGTGATCCGCAAACGTTCCAAGTCCAAAAGTCGTTCGCCTGTAGGAAGAAAGCGCAAGTGTGTCCGTAGCACAACAAATGTGAAAACCTACGATTATATGACAAAATTGAACTACTTGTTTCGAGACACACGATTTTTCCTGATAAAATCGAATAATGCTGAAAACATAACACTTTCAAAAGCAAGAGGAGTGTGGTCCACTTTACCACAAAATGAAGCCAATTTGAATCAAGCATACAGAGAGTCTCGCAATGTATTGCTAATATTTTCGGTCAAAGAGAGTGGGAAATTTGCTGGTTTTGCTCGGTTAGGAAGTGAATCACGACGAGATGTACCACCAATATCATGGGTGCTACCCCCAGGCCTTTCAGCCAAAGTACTTGATGGAGTTTTCAAAGTTGACTGGATTTGTCGAAAAGAATTGTCATTTAATAGTACCTTGCATCTTTACAACCCATGGAATGAAGGTAAGCCCGTCAAAATTGGAAGAGATGGGCAAGAAATAGAACCAAAAGTTGCAGAAGAGCTATGTAGGCTGTTTTCAGAAGATGAAGGTATTGAAATGACTCCTATTTTACGGAAGTCTAAAGAGGCATCAAAAAAATCATATGTTAAAAGTGGAGGTAACTATCGAACATATCGTGCCCCATTGGCTTTTAGAGGCTCATCATTTCGACATAGATTAGGTCCAAGAAATAGGAGAAAGATATACCAACCACCCAGAAATCGAGTTACAGGCCCTTATAAAAGAAGGTCACCTTCTCCATATTTACGGGATCGCTTTCCAATGTGGTTTGGACGTAATCGTGAAAGCTACAATAATACAAGTTCAGCAGCTGCAGAAGCCTATGTAGCAGAGTATATGCGATCCATGCATCATCAATTGCCTCCGTTACCATATGTTGCTCCTCCAGGTTTCAGTGGAGCTCTGACACCATATGACGGTATACCACCACCACCTCCACCCCCACCTCCACCTCGCTACTATGACCTTGCTGAATATCCTCGTTCTGTTCTTCTTTATGATAAAAGATCTTATGAACGGTCAGTAGATGAATTTTTATGGCGAACTGCTGATCGATCTCGGGGGCGAAGTCGTGAACGTGATTCAAGCAGGTCTTATCGTGATCGACGCTAA

Protein

METSNNTDAVNLGVGEVEAEIGEELKQLEEGKDYDTRSEVSSSSSSGSSSPSISSASTKSKESRVIRKRSKSKSRSPVGRKRKCVRSTTNVKTYDYMTKLNYLFRDTRFFLIKSNNAENITLSKARGVWSTLPQNEANLNQAYRESRNVLLIFSVKESGKFAGFARLGSESRRDVPPISWVLPPGLSAKVLDGVFKVDWICRKELSFNSTLHLYNPWNEGKPVKIGRDGQEIEPKVAEELCRLFSEDEGIEMTPILRKSKEASKKSYVKSGGNYRTYRAPLAFRGSSFRHRLGPRNRRKIYQPPRNRVTGPYKRRSPSPYLRDRFPMWFGRNRESYNNTSSAAAEAYVAEYMRSMHHQLPPLPYVAPPGFSGALTPYDGIPPPPPPPPPPRYYDLAEYPRSVLLYDKRSYERSVDEFLWRTADRSRGRSRERDSSRSYRDRR

Uniprot

H9JQ84   A0A212FJH4   A0A3S2N576   A0A2A4JJJ4   A0A2H1VNZ9   A0A194QNU0   + More
A0A0L7LRQ2   A0A2A4JJH6   A0A1E1WDN5   A0A194PVL2   A0A1Y1LAL9   A0A1Y1L5M7   A0A1W4WTD4   E2B7T5   A0A1B6CU59   D7EHP9   A0A2P8XZN1   A0A154P4I8   A0A0L7R462   A0A0M9A6E5   A0A088ARK3   A0A1B6HW22   A0A2A3EDN5   A0A1B6FWM4   A0A067QYD9   A0A158NM80   A0A026WF21   F4WK02   A0A151JWG8   N6UGZ1   E2A8Z2   E9J4H8   A0A195BYV0   A0A151IE71   A0A1L8DLJ1   A0A1L8DLK0   A0A1B0DCT0   A0A1B0CQA6   A0A2J7QIW6   A0A023ETE8   A0A1J1IGV9   Q17IT0   A0A0P4W957   A0A0P4W5X1   A0A0A9W0N2   A0A336KPF7   A0A336KN95   A0A336MJL1   A0A336KRA4  

Pubmed

19121390    22118469    26354079    26227816    28004739    20798317    + More
18362917    19820115    29403074    24845553    21347285    24508170    30249741    21719571    23537049    21282665    24945155    17510324    25401762    26823975   

EMBL

BABH01012013    AGBW02008266    OWR53893.1    RSAL01000414    RVE41834.1    NWSH01001177    + More
PCG72237.1    ODYU01003588    SOQ42543.1    KQ461190    KPJ07182.1    JTDY01000244    KOB78084.1    PCG72245.1    GDQN01005960    JAT85094.1    KQ459590    KPI97362.1    GEZM01063763    GEZM01063762    JAV68975.1    GEZM01063765    GEZM01063764    JAV68973.1    GL446209    EFN88228.1    GEDC01020340    GEDC01017402    GEDC01012287    JAS16958.1    JAS19896.1    JAS25011.1    KQ973114    EFA12141.2    PYGN01001114    PSN37472.1    KQ434806    KZC06128.1    KQ414657    KOC65667.1    KQ435726    KOX78177.1    GECU01028828    JAS78878.1    KZ288282    PBC29594.1    GECZ01015169    JAS54600.1    KK852879    KDR14470.1    ADTU01020341    KK107238    QOIP01000007    EZA54637.1    RLU20622.1    GL888190    EGI65452.1    KQ981652    KYN38629.1    APGK01026647    KB740635    KB632195    ENN79906.1    ERL89964.1    GL437703    EFN70091.1    GL768105    EFZ12260.1    KQ976395    KYM93106.1    KQ977890    KYM98972.1    GFDF01006849    JAV07235.1    GFDF01006850    JAV07234.1    AJVK01031363    AJWK01023339    NEVH01013573    PNF28522.1    GAPW01001030    JAC12568.1    CVRI01000050    CRK99451.1    CH477237    EAT46558.1    GDRN01080981    JAI62098.1    GDRN01080980    JAI62099.1    GBHO01042628    GBHO01027891    GBRD01004769    GDHC01003572    JAG00976.1    JAG15713.1    JAG61052.1    JAQ15057.1    UFQS01000664    UFQT01000664    SSX05918.1    SSX26277.1    SSX05919.1    SSX26278.1    UFQT01001153    SSX29169.1    SSX05915.1    SSX26274.1   

Proteomes

UP000005204    UP000007151    UP000283053    UP000218220    UP000053240    UP000037510    + More
UP000053268    UP000192223    UP000008237    UP000007266    UP000245037    UP000076502    UP000053825    UP000053105    UP000005203    UP000242457    UP000027135    UP000005205    UP000053097    UP000279307    UP000007755    UP000078541    UP000019118    UP000030742    UP000000311    UP000078540    UP000078542    UP000092462    UP000092461    UP000235965    UP000183832    UP000008820   

PRIDE

H9JQ84   

Pfam

PF04146   YTH        + More
PF01266   DAO

Interpro

IPR007275   YTH_domain        + More
IPR006076   FAD-dep_OxRdtase       
IPR023209   DAO       

ProteinModelPortal

H9JQ84   A0A212FJH4   A0A3S2N576   A0A2A4JJJ4   A0A2H1VNZ9   A0A194QNU0   + More
A0A0L7LRQ2   A0A2A4JJH6   A0A1E1WDN5   A0A194PVL2   A0A1Y1LAL9   A0A1Y1L5M7   A0A1W4WTD4   E2B7T5   A0A1B6CU59   D7EHP9   A0A2P8XZN1   A0A154P4I8   A0A0L7R462   A0A0M9A6E5   A0A088ARK3   A0A1B6HW22   A0A2A3EDN5   A0A1B6FWM4   A0A067QYD9   A0A158NM80   A0A026WF21   F4WK02   A0A151JWG8   N6UGZ1   E2A8Z2   E9J4H8   A0A195BYV0   A0A151IE71   A0A1L8DLJ1   A0A1L8DLK0   A0A1B0DCT0   A0A1B0CQA6   A0A2J7QIW6   A0A023ETE8   A0A1J1IGV9   Q17IT0   A0A0P4W957   A0A0P4W5X1   A0A0A9W0N2   A0A336KPF7   A0A336KN95   A0A336MJL1   A0A336KRA4  

PDB

2YUD     E-value=5.22992e-58,     Score=569

KEGG

101740205    K20100 YTH domain-containing protein 1 | (RefSeq) YTH domain-containing protein 1

GO

GO:0003723   GO:0046416   GO:0071949   GO:0003884   GO:0016805   GO:0016787   GO:0004003   GO:0006289   GO:0006367   GO:0006811   GO:0016020   GO:0005634   GO:0006260  

PANTHER

PTHR11530  

Length:

442

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00225

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03210

outside

1  -  442

 

 

Pi

133.840132

Theta

168.032496

Tajima's D

-0.84295

CLR

200.7771

CSRT

0.166591670416479

Interpretation

Uncertain