SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06611  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011792
Annotation
PREDICTED:_TPPP_family_protein_CG45057-like_[Amyelois_transitella]
Full name
TPPP family protein CG45057      
Location in the cell
Nuclear   Reliability : 2.877
 

Sequence

CDS
ATGTCTACTGAAGCACAGAATACGGATGCCGCTGTGGAGCAAGTGACACAGGAAGTCAAGGACGTCAAGCTTGAGAACGGGAACGCGCCGGGAGCATCCAATGGAACGTCCAGTAAAAGCGAGGATAACGCCTTATCTTTCAAGGAAGCCTTCAAGGCGTTTTCCAAATTTGGAGATCCCAAGTCCGATGGAAAAGCCATCACGCTCTCGCAAAGCGACAAATGGATGAAGCAAGCCAAAGTCATTGATGGAAAGAAAATAACAACAACGGACACGGCCATTCACTTCAAAAAACTCAAATCGGTAAAACTCGGCATCGACGACTACCAGAAGTTTCTAGATGATCTCGCGAAGAACAAAAAAGTGGAACTTGACGAAATTAAGAAGAAGTTGACAACTTGCGGCCAACCGGGAATTACATCACACGTTACAAAATCACCGGCAGCCGCAGCGGCCGTAGATCGATTGACAGACACAAGCAAATATACTGGCTCGCACAGGCAGCGCTTCGATGAAACTGGAAAAGGGAAGGGAATCGCCGGCAGGAAAGACTTAGTCGACGGGTCCGGCTACGTCACTGGATACCAACATAAAGATACTTACAATAAATCTCACTAA
Protein
MSTEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDNALSFKEAFKAFSKFGDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCGQPGITSHVTKSPAAAAAVDRLTDTSKYTGSHRQRFDETGKGKGIAGRKDLVDGSGYVTGYQHKDTYNKSH

Summary

Similarity
Belongs to the TPPP family.
Keywords
Complete proteome   Reference proteome  
Feature
chain  TPPP family protein CG45057
EMBL
BABH01012031    GDQN01001772    JAT89282.1    RSAL01000097    RVE47668.1    KQ461190    + More
KPJ07196.1    AGBW02008266    OWR53879.1    KQ459590    KPI97348.1    GAIX01012248    JAA80312.1    GL436364    EFN72070.1    AJVK01000389    AJVK01000390    KQ971327    EEZ99609.1    GFDF01006471    JAV07613.1    GEZM01068530    JAV66908.1    JTDY01000254    KOB78041.1    GEBQ01020542    JAT19435.1    CH480815    EDW41744.1    AE014296    AFH04463.1    AGB94631.1    AGB94632.1    AY071493    AY071358    CM000363    CM002912    EDX10709.1    KMZ00027.1    CM000159    EDW95422.1    KMZ00028.1    GFDL01005444    JAV29601.1    CH891728    EDW99761.1    KRK02428.1    CH477517    EAT39656.1    KRK05225.1    KK107109    EZA59234.1    QOIP01000008    RLU19700.1    CH954178    EDV52277.1    KRK02427.1    KRK05224.1    KQS44206.1    CH379070    KRT08627.1    EAL30065.3    ATLV01023266    KE525341    KFB48786.1    LBMM01006125    KMQ90902.1    DS231933    EDS27566.1    APCN01003693    CH479203    EDW30390.1    AXCM01000934    GL450402    EFN81031.1    CVRI01000043    CRK95875.1    AXCN02000558    CH963876    EDW76914.1    OUUW01000012    SPP87072.1    GALA01001405    JAA93447.1    GDHF01021804    JAI30510.1    GAKP01006237    JAC52715.1    CH902618    EDV39613.1    AAAB01008807    EDO64745.1    GAMC01011408    JAB95147.1    GAKP01006238    JAC52714.1    EAA04714.5    GDHF01017010    GDHF01008668    JAI35304.1    JAI43646.1    GGFJ01009103    MBW58244.1    KPU78108.1    KPU78109.1    KQ435706    KOX80211.1    GL888284    EGI63329.1    GAPW01004101    JAC09497.1    GAPW01004100    JAC09498.1    GBXI01005962    JAD08330.1    GBXI01013137    JAD01155.1    ADMH02000528    ETN66092.1    NEVH01017474    PNF24186.1    GALA01000895    JAA93957.1    AXCP01008358    GBGD01003260    JAC85629.1    JR039218    JR039219    AEY58586.1    AEY58587.1    KQ976532    KYM81586.1    ADTU01026655    APGK01027109    KB740648    KB632292    ENN79779.1    ERL91604.1    JXUM01107734    KQ565169    KXJ71259.1    GECU01024608    GECU01016865    JAS83098.1    JAS90841.1    JXJN01022474    KQ981085    KYN09592.1    GECL01001248    JAP04876.1    CH916366    EDV95763.1    KK852855    KDR14913.1    KZ288235    PBC31396.1    GFTR01002765    JAW13661.1    GBBI01000014    JAC18698.1    EZ424034    ADD20310.1    CP012525    ALC43971.1    HP429404    ADN29904.1   
Pfam
PF05517   p25-alpha
Interpro
IPR011992   EF-hand-dom_pair        + More
IPR008907   P25-alpha       
SUPFAM
SSF47473   SSF47473       
PDB
2JRF     E-value=2.00218e-19,     Score=232

Ontologies

Topology

Length:
205
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00016
Exp number, first 60 AAs:
0
Total prob of N-in:
0.25215
outside
1  -  205
 
 

Population Genetic Test Statistics

Pi
253.377861
Theta
179.240412
Tajima's D
0.908555
CLR
0.570753
CSRT
0.630668466576671
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 AITISQSDK 100.00 1e-05
26280517 STCSGDSGGPISIGSGGGR 100.00 1e-05
25044914 STCEQFSVSGYPTIK 100.00 1e-05
28467696 STDGDNEESYRSESSSSSSSSSSSSR 100.00 1e-05
28556443 SEDNALSFK 100.00 5e-05
28556443 SEDNALSFK 100.00 1e-04
28556443 AITLSQSDK 100.00 2e-04
28556443 SGDTANDFIEGLR 100.00 2e-04
28556443 LENGNAPGASNGTSSK 100.00 3e-04
28556443 LENGNAPGASNGTSSK 100.00 3e-04
28556443 ITTTDTAIHFK 100.00 3e-04
28556443 KVELDEIK 100.00 3e-04
26280517 KITEIYPTHACK 100.00 0.048
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号