SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06603  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011677
Annotation
PREDICTED:_uncharacterized_protein_LOC101742952_[Bombyx_mori]
Location
Bomo_Chr11(+):11378322-11385395      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.169
 

Sequence

CDS
ATGGATGTCGTGGAAAACTCTGTGTGTTCTACTGTAGAAGATAACGAAAAGATTAAAAACACTAATACAGATAGAGAAGAGATCGTCCAAACTTCGGGAGGATCTAATGTGTGTCAGAAAACGAACGGCGTCGCTGAGACCGACGAGTCCGCTGTAGATTGTTCAGTTCCTGCAGAGGTTTTAGAAATCGCTGTGATTAACCCAGACATTGAAGTTCAATGTGAAAATAATCAAGATGAAGTCATTCCAGAGCCTGGCAATTCAGAATCAGTCATCAATGACACAAGTGCTTCAGACATAATACCATGCGAATGTGATCCTGCACCAGTAGTAGCTGCTGCTATTCCTACAGATACAGATTCCAATGAAAATAATGTTGAAAAGTCACTTTCTGAAGTACTGGATCAAGAAGTAGAGAGCACAGTTGAACTGGAGAGTGTGGTAGATATAGGCTCTGACAGGGTCGCTTTTGAGACTGAGATCCTAGTTGAAGAAAATGTAAATGATTCAAATGAATCTAAGATTGATGAAATTGTTAAATTAAGACAGGGAACACCTGACCTTTTGAATGAATTAGATCAAAATATTGAATTTAGTGAAGCATTACGCTCAACTGACATTACTGGAAATGGAGTCAATAATAATACTACACCTGTAGAAGAAGTATATAATAAAAAAGAGTTATTGGATATTTTGAAGGGTAATGATGCTGAAGAATGTAAACCTGTCATCACTCGTGTCAGTGTAGATAAATTGACTGAAACAGAAAAAGCCCTTCAACAACTGTCACGTCTTAAGAAGCAAAAAAAAACTAAAAGTAATGTGAAAGTATCAATCAGGTGCAAGAGTGAACGCAAAGAAATAGTTGCTAAAAAAGAACCAGAGGTAAAAAAAGAATACAGTATAGTCAAAGCCCTTGTTAAAGATTGGGATGATGAAGAACCACCCGAAGGTGAACAGTTAAATCAAATAATAAAAGAGAATCAAAGTTTAGATGTGGAGCCCCAAGATATTGTAGTCATTGAGGAAGAGGAAACCAAACAAAACCAAACTGTGTTACGAACATCAGTTGATTCTGCTGAAGAGACCACAAATCTTAATCCCAGCAAGAGTGGTGATGAAAATTCTGCACAACCTCAACGTAGACTAAGCAGAATCATTAAGAAAAAAGTTATTTTTGATCCTGACAATCCAGACACATTTACAAAAGTTAAATCATTATCTAAAAACAAAGAATTGTCAGCTGATAAAGATCAAATTGTTGTTAAAAAACCGAAAATGGATATTGTATACTCTAGACCAAAGTCTAAATCTCCAGTTTCTAAAATGCAATGGAAAAAGCCATCTTCTAAAAATAGCAAACAATGTAAGAGGCTGTCAGAAGTTGATAAATTATTAATGGATGAAGGTGCAGTTAACATGATTTATCAACTGACTCCTGAAGCACCTAAAGGCAAAAAAAACATGAAAACAAAAGCAGAATTCATTAAGAAAATACAGAGTACTACTCCTGACTCTAAGGAAATGAAGTTTAGAGAAAGAAAAAAAGAATTGAAAGGAGAAGTAGGTGAAGCCAAGAAGATATTAGGTGGCAAATATAGGAGTTCAATCGGCAGTTCAGTCAAATCTCCTTCAATGAATGAAGATTTTGAAGCACACAGTGCTGACGATTCCATTATTTATCGCCGACACTCATCTAGCTCTTACTCAAGTTCGTGTATGAGCCCTCGGAGACTTAGTGACGTTGAGGGAAGTGTTATACAAGTTACAACAAGCCATTCAATGCTGCAACACACTGAAACTGAGACGCAACCAAATAATGATGCAGAAAGCAAAAACTCTGTCTCTGAACCATTCTTAGAAGATCAAAATGTCATTCCAAAACAAATAAATAAAGATGATTGTTTGTCAATTAAAGAAAAACTAAATACCAAATTGTCCCTTGCTTTGAATAAGAGAAAAAGAGAAATTGTTAAAACGGAGAAACCGAGTAAACAAAGAAAAACTATAAAAAGTCAAGAGAAAGTCATAAACAGGGAAATAGTCCATAGCTTTAAGTATGTCTCTGTTCAAATTGATCAGAGATTTGGTGAAATATGTATCCTTGATTCCGGGACCAATTTTAATATAGAGGTAATAAAAGAAATAGAGAAAGCTTTATTGTTTTTAGATTCCAGAGAAGATATATCTGTAACATTGTTATTGTCCACTAGTGGACAGATGTGCCTAAACTTAGATTTAAACCTTCTATTAACTAAGAGTCTTGATGACAGAACTAATGATGCTCATGAAATTGCTGAAACTATCAGATCCTTACTGTGTACAATTCTGAACCACACAAAATTGTTGTGCACAGCTGTAGAGAGGGGATGCACTGGCCTTGGTTTCACATTAGTGGCATTAAGTGACATCACTTTTGCCTCTGAATTTGCTACTTTTGCACTAAGTAATGCCGAGAAAAATGCAGAATATAGTTTGACACCTGGTATCGCTATACTTAGTTATTTATTACCACAACCATTGCTCAACAATATTGTACTATTTGGGAGACAACTGTCTGCAACAGCAGCTGTGCAGAGTGGCCTTATTAGTCATTGCCTCTGGCCGGCAAGCTTTATAGAACAGCTACGAGTTGTCATAAAAGATATAGCTGCTCAACCTGCCCAAGACGTTTTACTAAAAAAGCAACTTTTAACCCTGAAGAAGACCGAATCAATGGATTCAATTAAGTCCAGCCTTGAAAAAGAAAAAGATATGTTTGTTAAATACTGGACCACCGTTGAGAGAAATGACGAATCCCATTAA
Protein
MDVVENSVCSTVEDNEKIKNTNTDREEIVQTSGGSNVCQKTNGVAETDESAVDCSVPAEVLEIAVINPDIEVQCENNQDEVIPEPGNSESVINDTSASDIIPCECDPAPVVAAAIPTDTDSNENNVEKSLSEVLDQEVESTVELESVVDIGSDRVAFETEILVEENVNDSNESKIDEIVKLRQGTPDLLNELDQNIEFSEALRSTDITGNGVNNNTTPVEEVYNKKELLDILKGNDAEECKPVITRVSVDKLTETEKALQQLSRLKKQKKTKSNVKVSIRCKSERKEIVAKKEPEVKKEYSIVKALVKDWDDEEPPEGEQLNQIIKENQSLDVEPQDIVVIEEEETKQNQTVLRTSVDSAEETTNLNPSKSGDENSAQPQRRLSRIIKKKVIFDPDNPDTFTKVKSLSKNKELSADKDQIVVKKPKMDIVYSRPKSKSPVSKMQWKKPSSKNSKQCKRLSEVDKLLMDEGAVNMIYQLTPEAPKGKKNMKTKAEFIKKIQSTTPDSKEMKFRERKKELKGEVGEAKKILGGKYRSSIGSSVKSPSMNEDFEAHSADDSIIYRRHSSSSYSSSCMSPRRLSDVEGSVIQVTTSHSMLQHTETETQPNNDAESKNSVSEPFLEDQNVIPKQINKDDCLSIKEKLNTKLSLALNKRKREIVKTEKPSKQRKTIKSQEKVINREIVHSFKYVSVQIDQRFGEICILDSGTNFNIEVIKEIEKALLFLDSREDISVTLLLSTSGQMCLNLDLNLLLTKSLDDRTNDAHEIAETIRSLLCTILNHTKLLCTAVERGCTGLGFTLVALSDITFASEFATFALSNAEKNAEYSLTPGIAILSYLLPQPLLNNIVLFGRQLSATAAVQSGLISHCLWPASFIEQLRVVIKDIAAQPAQDVLLKKQLLTLKKTESMDSIKSSLEKEKDMFVKYWTTVERNDESH

Summary

Uniprot
H9JQ71   A0A2H1W7N8   A0A2A4JNG5   A0A2W1BH63   A0A212F403   A0A194PWF8   + More
A0A194QNV6  
Pubmed
19121390    28756777    22118469    26354079   
EMBL
BABH01012046    ODYU01006850    SOQ49067.1    NWSH01000902    PCG73615.1    KZ150049    + More
PZC74439.1    AGBW02010462    OWR48467.1    KQ459590    KPI97338.1    KQ461190    KPJ07208.1   
Proteomes
UP000005204    UP000218220    UP000007151    UP000053268    UP000053240   
PRIDE
H9JQ71   
Pfam
PF00378   ECH_1
Interpro
IPR029045   ClpP/crotonase-like_dom_sf        + More
IPR001753   Enoyl-CoA_hydra/iso       
SUPFAM
SSF52096   SSF52096       
ProteinModelPortal
H9JQ71   A0A2H1W7N8   A0A2A4JNG5   A0A2W1BH63   A0A212F403   A0A194PWF8   + More
A0A194QNV6  
PDB
2GTR     E-value=7.72265e-10,     Score=157

Ontologies

KEGG
101742952    K00653 chromodomain protein Y [EC:2.3.1.48] | (RefSeq) uncharacterized LOC101742952
GO
GO:0003824   GO:0008152   GO:0006468   GO:0006813   GO:0008076   GO:0005216   GO:0006811   GO:0016020   GO:0005634   GO:0006260  

Topology

Length:
934
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.19698
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00003
outside
1  -  934
 
 

Population Genetic Test Statistics

Pi
200.833008
Theta
186.155696
Tajima's D
0.265592
CLR
0.570742
CSRT
0.449077546122694
Interpretation
Uncertain
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