Gene

KWMTBOMO06600

Pre Gene Modal

BGIBMGA011799

Annotation

PREDICTED:_peroxisomal_membrane_protein_PMP34_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr11(-):11353965-11355841      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.116

CDS

ATGACATCATTGTTAAGTTATGAGACTTTGGTCCACGCTATAGCTGGCGCTACTGGCAGCGTCGTGGGCATGACAATATTTTATCCTTTGGATACACTCAGGTCACGGATTCAAGTTGAAGATTCGAAGAAGTTGCAAGGATCGACACTGGAATTATTAATAAAACTAGCCAATGAAGAAGGTATTGAGTCTCTTTACAGAGGGCTATCACCAGTTTTACAGTCACTCTCAGTATCCAACTTTGTTTACTTTTATTCATTCCATGCATTACGAAAACTATATTCCCAGCCAACATCAGCATTGCGCGATCTACTTTTTGGTTTAATTGCTGGAAGTATCAATGTTATTTTAACATCACCGCTATGGGTTGTAAATACAAGAATAAAGTTAGAAAAAAACAATTACAAAAATTTATTTGAAGGTCTCCTTGAACTGGCAAGAACGGAAGGCGCAAAAGGCCTCTGGTCTGGAACTGTTCCTTCACTACTTCTGGTTTCAAATCCAGCTATTCAGTTTATGGTGTATGAATCTCTAAAACGAAAATTTATGTCCCAAGGCTCATTTCATACATATACTTCATTTTTGATTGGGGCTACAGCAAAAGCTGTAGCCACAACTCTAACCTACCCCTTGCAAGTAATTCAATCTAGACTTCGTGCTGGTACAAATTTGAAAACAATGGTGAAAGATATTAAGTCAAAACCCTTTTCAATGTTCCGTGGACTGGAAGCCAAGCTTTTGCAAACAGTCATGACTGCTGCTTTGATGTTTATTGTATATGAAAAACTTGTTATTTTAGTTTTAACTATTATGAGAGTTAGGATGAAAAAAATTCACTGA

Protein

MTSLLSYETLVHAIAGATGSVVGMTIFYPLDTLRSRIQVEDSKKLQGSTLELLIKLANEEGIESLYRGLSPVLQSLSVSNFVYFYSFHALRKLYSQPTSALRDLLFGLIAGSINVILTSPLWVVNTRIKLEKNNYKNLFEGLLELARTEGAKGLWSGTVPSLLLVSNPAIQFMVYESLKRKFMSQGSFHTYTSFLIGATAKAVATTLTYPLQVIQSRLRAGTNLKTMVKDIKSKPFSMFRGLEAKLLQTVMTAALMFIVYEKLVILVLTIMRVRMKKIH

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.

Uniprot

H9JQJ3   A0A2W1BJF5   A0A1E1WCM2   A0A2A4JPI6   A0A2H1W9A1   A0A0L7KZY9   + More
A0A212F408   A0A194Q1Q8   A0A194QUI0   H9JQJ4   S4PMR4   A0A336K7Y0   A0A1Q3G2P7   A0A1Q3G319   A0A1V9WY48   E0VAP9   A0A226EGU3   A0A1Z5L6Q5   A0A1D2NIK9   A0A2R5LM62   A0A293N2Q0   A0A182M5J5   A0A182R4E3   A0A182WJ54   A0A1L8DZS3   A0A182JQP4   A0A0K8UUJ8   T1L2V7   T1K9Y5   A0A1B6MD75   A0A1B6BWN5   Q2LZ86   V9IGY4   A0A182XYZ3   A0A3Q2DB20   A0A1B6J3Q3   B4HU50   B3M915   A0A067QZR0   A0A034VBU1   B4PHU3   B4QQK3   A0A182TYJ8   B3NC25   B4LGI4   A0A210PFI9   A0A1A7WQE2   Q7QJH5   A0A182I3E2   A0A182X3M7   W8BL00   Q8IGS6   A0A1B6GCQ0   A0A088AC08   A0A182PQB9   A0A3R7T048   Q9VZD9   A0A1Y1MST7   A0A0M9A6Q6   A0A023FWD0   B4L0D0   A0A023FIN0   A0A1W4W6E3   A0A182V752   A0A131YQ45   A0A1A8D4G1   B4N4A9   A0A224Z929   C3Y9L7   A0A1L8EIG6   A0A1L8EIF3   A0A2J7RQZ8   A0A0L0C1P6   B4J2Q3   A0A1A8UAF2   A0A1A8C9B8   A0A1A8IFJ1   A0A026WV14   A0A3Q3B7J2   A0A3B0KNP0   A0A0P4WL46   A0A1A9W7N0   Q17HF0   A0A1A8QL63   A0A3Q3GQG1   T1IIK0   A0A182NHS3   H2LXT8   A0A1A8P1L6   A0A182G349   A0A1L8EI81   A0A2I4B3P3   A0A2K5NYW4   A0A2I3HZK6   A0A1I8PDK0   A0A195F6M8   A0A0M4ENK3   A0A0A9W6D0   A0A084WNE8   A0A1L8EIN7  

Pubmed

19121390    28756777    26227816    22118469    26354079    23622113    + More
28327890    20566863    28528879    27289101    15632085    17994087    25244985    24845553    25348373    17550304    22936249    28812685    12364791    14747013    17210077    24495485    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    28004739    26830274    28797301    18563158    26108605    24508170    30249741    17510324    17554307    26483478    25401762    26823975    24438588   

EMBL

BABH01012050    BABH01012051    KZ150049    PZC74441.1    GDQN01006326    JAT84728.1    + More
NWSH01000902    PCG73618.1    ODYU01006850    SOQ49064.1    JTDY01003951    KOB68787.1    AGBW02010462    OWR48464.1    KQ459590    KPI97335.1    KQ461190    KPJ07211.1    BABH01012056    GAIX01003420    JAA89140.1    UFQS01000109    UFQT01000109    SSW99758.1    SSX20138.1    GFDL01000972    JAV34073.1    GFDL01000830    JAV34215.1    MNPL01033479    OQR66173.1    DS235012    EEB10455.1    LNIX01000003    OXA56812.1    GFJQ02004020    JAW02950.1    LJIJ01000030    ODN05079.1    GGLE01006465    MBY10591.1    GFWV01022667    MAA47394.1    AXCM01000285    GFDF01002101    JAV11983.1    GDHF01024941    GDHF01022284    JAI27373.1    JAI30030.1    CAEY01000991    CAEY01001893    GEBQ01006099    JAT33878.1    GEDC01031607    JAS05691.1    CH379069    EAL29622.2    JR043314    AEY59756.1    GECU01036727    GECU01031252    GECU01027349    GECU01013907    JAS70979.1    JAS76454.1    JAS80357.1    JAS93799.1    CH480817    EDW50471.1    CH902618    EDV38959.1    KK853064    KDR11884.1    GAKP01019370    JAC39582.1    CM000159    EDW93402.1    CM000363    CM002912    EDX09209.1    KMY97572.1    CH954178    EDV50913.1    CH940647    EDW69422.1    NEDP02076736    OWF35221.1    HADW01006540    HADX01002386    SBP07940.1    AAAB01008807    EAA04680.4    APCN01000207    GAMC01012604    JAB93951.1    BT001624    AAN71379.1    GECZ01009550    JAS60219.1    QCYY01000643    ROT83710.1    AE014296    AAF47885.2    AFH04286.1    GEZM01028224    GEZM01028223    JAV86367.1    KQ435724    KOX78375.1    GBBL01001506    JAC25814.1    CH933809    EDW18076.1    GBBK01003035    JAC21447.1    GEDV01007869    JAP80688.1    HAEA01000527    SBQ29007.1    CH964095    EDW78983.1    GFPF01011954    MAA23100.1    GG666492    EEN63273.1    GFDG01000354    JAV18445.1    GFDG01000351    JAV18448.1    NEVH01000613    PNF43262.1    JRES01000997    KNC26273.1    CH916366    EDV96044.1    HAEJ01004807    SBS45264.1    HADZ01011374    SBP75315.1    HAED01009725    HAEE01008748    SBQ95937.1    KK107111    QOIP01000011    EZA58944.1    RLU16604.1    OUUW01000012    SPP87476.1    GDRN01022630    JAI67782.1    CH477250    EAT46056.1    HAEF01020034    HAEG01013019    SBR93844.1    JH430177    HAEI01001209    HAEH01009281    SBR75158.1    JXUM01140965    KQ569159    KXJ68746.1    GFDG01000349    JAV18450.1    ADFV01024826    ADFV01024827    ADFV01024828    ADFV01024829    ADFV01024830    KQ981763    KYN36036.1    CP012525    ALC43542.1    GBHO01040643    GBRD01011846    GBRD01011845    GDHC01016753    GDHC01012894    JAG02961.1    JAG53978.1    JAQ01876.1    JAQ05735.1    ATLV01024593    KE525352    KFB51742.1    GFDG01000346    JAV18453.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053268    UP000053240    + More
UP000192247    UP000009046    UP000198287    UP000094527    UP000075883    UP000075900    UP000075920    UP000075881    UP000015104    UP000001819    UP000076408    UP000265020    UP000001292    UP000007801    UP000027135    UP000002282    UP000000304    UP000075902    UP000008711    UP000008792    UP000242188    UP000007062    UP000075840    UP000076407    UP000005203    UP000075885    UP000283509    UP000000803    UP000053105    UP000009192    UP000192221    UP000075903    UP000007798    UP000001554    UP000235965    UP000037069    UP000001070    UP000053097    UP000279307    UP000264800    UP000268350    UP000091820    UP000008820    UP000075884    UP000001038    UP000069940    UP000249989    UP000192220    UP000233060    UP000001073    UP000095300    UP000078541    UP000092553    UP000030765   

PRIDE

H9JQJ3    H9JQJ4    Q8IGS6    Q9VZD9   

Pfam

PF00153   Mito_carr

Interpro

IPR018108   Mitochondrial_sb/sol_carrier        + More
IPR023395   Mt_carrier_dom_sf       
IPR002030   Mit_uncoupling_UCP-like       
IPR002067   Mit_carrier       

SUPFAM

SSF103506   SSF103506       

Gene 3D

1.50.40.10    

ProteinModelPortal

H9JQJ3   A0A2W1BJF5   A0A1E1WCM2   A0A2A4JPI6   A0A2H1W9A1   A0A0L7KZY9   + More
A0A212F408   A0A194Q1Q8   A0A194QUI0   H9JQJ4   S4PMR4   A0A336K7Y0   A0A1Q3G2P7   A0A1Q3G319   A0A1V9WY48   E0VAP9   A0A226EGU3   A0A1Z5L6Q5   A0A1D2NIK9   A0A2R5LM62   A0A293N2Q0   A0A182M5J5   A0A182R4E3   A0A182WJ54   A0A1L8DZS3   A0A182JQP4   A0A0K8UUJ8   T1L2V7   T1K9Y5   A0A1B6MD75   A0A1B6BWN5   Q2LZ86   V9IGY4   A0A182XYZ3   A0A3Q2DB20   A0A1B6J3Q3   B4HU50   B3M915   A0A067QZR0   A0A034VBU1   B4PHU3   B4QQK3   A0A182TYJ8   B3NC25   B4LGI4   A0A210PFI9   A0A1A7WQE2   Q7QJH5   A0A182I3E2   A0A182X3M7   W8BL00   Q8IGS6   A0A1B6GCQ0   A0A088AC08   A0A182PQB9   A0A3R7T048   Q9VZD9   A0A1Y1MST7   A0A0M9A6Q6   A0A023FWD0   B4L0D0   A0A023FIN0   A0A1W4W6E3   A0A182V752   A0A131YQ45   A0A1A8D4G1   B4N4A9   A0A224Z929   C3Y9L7   A0A1L8EIG6   A0A1L8EIF3   A0A2J7RQZ8   A0A0L0C1P6   B4J2Q3   A0A1A8UAF2   A0A1A8C9B8   A0A1A8IFJ1   A0A026WV14   A0A3Q3B7J2   A0A3B0KNP0   A0A0P4WL46   A0A1A9W7N0   Q17HF0   A0A1A8QL63   A0A3Q3GQG1   T1IIK0   A0A182NHS3   H2LXT8   A0A1A8P1L6   A0A182G349   A0A1L8EI81   A0A2I4B3P3   A0A2K5NYW4   A0A2I3HZK6   A0A1I8PDK0   A0A195F6M8   A0A0M4ENK3   A0A0A9W6D0   A0A084WNE8   A0A1L8EIN7  

PDB

2LCK     E-value=1.12262e-10,     Score=158

KEGG

101737458    K13354 solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17 | (RefSeq) p

PATHWAY

04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0031966   GO:0016021   GO:0006839   GO:0022857   GO:0051724   GO:0080122   GO:0005779   GO:0015228   GO:0015217   GO:0015230   GO:0005347   GO:0044610   GO:0005778   GO:0006635   GO:0015908   GO:0051087   GO:0055085  

Length:

279

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

101.60128

Exp number, first 60 AAs:

19.98451

Total prob of N-in:

0.28121

POSSIBLE N-term signal

sequence

inside

1  -  4

TMhelix

5  -  27

outside

28  -  103

TMhelix

104  -  126

inside

127  -  186

TMhelix

187  -  209

outside

210  -  245

TMhelix

246  -  268

inside

269  -  279

 

 

Pi

283.396814

Theta

229.079733

Tajima's D

0.841229

CLR

0

CSRT

0.619169041547923

Interpretation

Uncertain