SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06598  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011675
Annotation
hypothetical_protein_KGM_06038_[Danaus_plexippus]
Location in the cell
Mitochondrial   Reliability : 2.241
 

Sequence

CDS
ATGTACGAGCGCGCGGCTCGGTGCGCGGCGGAGGGCGGCGGCGTGGCGGTGCGGCGTCGGTACCTCGCCGCGGCGCTCACCGCGCTGCGCATGGCGCGTCCCGACCACGCCTTCATAGCGCGACCCGCCACGCATCTAGACTCCAAACTACAGGTAATCGGTCCCGAAGAATTAGCAGCGGAATTACGTGAAGAAGTCCCGGATTCCCAAGACCCAGTAAAACAAGCTCTGCTTAACAGTGAAAACATAAACTTCGACCGTCTGTATACAACCTTGAAAGATGCAAATGCAGATACCTTGCTCACAGTAACTAAAAGAGCAATAAGTACAGGACAGTTTCTACCGCGGTGGTTTTTGCATAGATATTTGGAGGTTGACGGAGCGGGCTGCGTGCGTGCGTTACTGAGCGGAGGGCGCGCGGGCGAGGCGGGGGCGGCGTGGTGCGCGCTGGCACGAGCCTCGCTGGCCACACTGCAGCCGCGCGGACCGCCCGCTATGGCGCACCTCTCGCTAGCTGATTTATTACTCGCAGAGCTCGCCGACCATCAACAACCATACGCCAAACAGGTACACGACGAGATAGATTCGCTGGTAAAGGAATATACTCAAGTTATAATTCGCACATCTGAAGATATGAAATTAGTATAA
Protein
MYERAARCAAEGGGVAVRRRYLAAALTALRMARPDHAFIARPATHLDSKLQVIGPEELAAELREEVPDSQDPVKQALLNSENINFDRLYTTLKDANADTLLTVTKRAISTGQFLPRWFLHRYLEVDGAGCVRALLSGGRAGEAGAAWCALARASLATLQPRGPPAMAHLSLADLLLAELADHQQPYAKQVHDEIDSLVKEYTQVIIRTSEDMKLV

Summary

Interpro
IPR021717   Nucleoporin_Nup160       

Ontologies

GO

Topology

Length:
215
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01591
Exp number, first 60 AAs:
0.01061
Total prob of N-in:
0.31922
outside
1  -  215
 
 

Population Genetic Test Statistics

Pi
151.606043
Theta
165.69438
Tajima's D
0.194549
CLR
17.846684
CSRT
0.422078896055197
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号