Gene

KWMTBOMO06596

Pre Gene Modal

BGIBMGA011801

Annotation

F-box/LRR-repeat_protein_16_[Papilio_xuthus]

Location

Bomo_Chr11(-):11289993-11297401      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.718

CDS

ATGTCGTCAGTGTCAGCACAAGGAGTAGTAGAACGCGCCTCGGCAGAGCTCTCTCGACGGATCACTGGACTGGGGTTGCGCGGCCGTAAGCGTTCCCCCAGTGTTGTGGAGCGTATGGCCAATGCACTCTGTGGACCTGCTGCGCCCGCACCCCCTCGCGTTCCGCGCCGCCGGCGACCCTCACCGCGACCTCTTCTTTGGAATCAATTTATTTTGGATGACAGATTTTTAGAAAAGTTTTTTTTGTTTTTTAATTCTGTTGACAGGAGAACCCTTGCACAGGTATGCACTCGATGGCGCGATATATTGTACTCATCACCACGATGGTGGACGGGCTTGATAGCGGTGTTAGATTGTCGGGAACTACGTATATCTACCGGGTGTTGCATGCAGCGTTTCTACAATTCGCTGATGAGAAGAGGTATTCGTGGTGTCGTTTTAATATCTGCTTCGGATGATGATATTAACGAATTCATTAGACAGTTCCCCTTGTCGGCTCATCATGTCCATGCTATTGGCTTAAAAGGGTGTACTATAACAGATAGGGGGCTCGAAGCTATTTTGGATCACTTACAAGTACTGTTTGAGTTAGAACTAACAGGATGTAATGAAATAACAGAAGCCGGATTATGGGCATGTCTAACACCTCGAATTGTATCACTCACGCTTACTGACTGCATTAACATAGCTGATGAGGCTGTTGGAGCTGTCGCACAATTGCTTCCGTCCCTGTACGAGTTCTCATTGCAAGCCTACCACGTCACGGATGCAGCCCTCGGTTACTTCTCTCCAAAGCAGAGCGCATCGCTGAGCGTCCTGCGTCTGCAGAGTTGCTGGGAACTCACCAATCATGGTGTTGTTAATATCGTGCACTCGTTGCCGAACCTGACGGTGCTGTCGCTGAGCGGCTGCAGCAAGGTGACGGACGAGGGCGTGGAGCTGCTGGCGGAGAACCTGCCGCGCCTGCGCAGCCTCGACCTGAGCTGGTGTCCGCGCGTCACCGACAGCTCGCTCGAGTACATCGCCTGCGACCTCAACCACCTCGAAGAGCTCACTCTCGATAGATGTGTGCATATAACGGACATCGGCGTGGGGTACATCAGCACCATGCAGACCCTGGTGGCGCTGTACCTTCGCTGGTGCTCGCAGCTGCGAGACTTCGGCGTGCAACATCTTTGTACCATGCGGTCTTTACAGTGTCTGTCCTTAGCAGGTTGTCCGCTGCTGACGTCCGGAGGACTCTCGAATCTGATACAGCTGCGGCAGCTTCGCGAGCTGGAGCTGACCAACTGCCCCGGAGTCTCTCCGGAACTTTTTGACTACATACATGAACATCTTCCTAAATGCGTTATCATAGAGTGA

Protein

MSSVSAQGVVERASAELSRRITGLGLRGRKRSPSVVERMANALCGPAAPAPPRVPRRRRPSPRPLLWNQFILDDRFLEKFFLFFNSVDRRTLAQVCTRWRDILYSSPRWWTGLIAVLDCRELRISTGCCMQRFYNSLMRRGIRGVVLISASDDDINEFIRQFPLSAHHVHAIGLKGCTITDRGLEAILDHLQVLFELELTGCNEITEAGLWACLTPRIVSLTLTDCINIADEAVGAVAQLLPSLYEFSLQAYHVTDAALGYFSPKQSASLSVLRLQSCWELTNHGVVNIVHSLPNLTVLSLSGCSKVTDEGVELLAENLPRLRSLDLSWCPRVTDSSLEYIACDLNHLEELTLDRCVHITDIGVGYISTMQTLVALYLRWCSQLRDFGVQHLCTMRSLQCLSLAGCPLLTSGGLSNLIQLRQLRELELTNCPGVSPELFDYIHEHLPKCVIIE

Uniprot

A0A2H1W1M7   A0A194QQH0   A0A194PVI1   A0A212F419   A0A2W1BRR0   H9JQJ5   + More
A0A0L7LDG0   D6WDC3   A0A1B6DJ65   E2BRQ6   E0VAN7   E2A4Z4   F4WSN2   A0A195DIX6   A0A1B0C9D5   A0A195C2J0   A0A151XHE0   A0A195FI88   A0A151I0T1   A0A0K8WC17   A0A067QW04   W8ACT2   B4PFM2   A0A1W4W8M2   A0A1W4VV22   B4N4M4   B3NGY7   A0A3B0K089   B4J2J1   Q8SXG5   A0A0J9RTD9   B4HEW7   Q9VTL8   B4LCQ4   B4KUR8   A0A034WS40   A0A0A1X1V0   B3M4A5   A0A3L8DEY5   A0A084WM59   A0A1J1HHJ7   A0A0N0BIG5   A0A1S4G7X2   A0A1B0FI85   A0A2A3EM42   A0A2C9GQ34   A0A088A9T9   V9ILB3   Q7PZW8   A0A026VY90   A0A154PAM3   A0A336K9B2   B4QQ92   A0A023F3W1   T1ICJ9   E9IVB6   J9K260   A0A2S2PR86   A0A2S2R3N7   A0A2H8TSZ1   A0A310SFT3   T1J1V4   A0A1S3K0D5   A0A0K2TYP2   A0A210QVG4   A0A087UV73   R7VHG4   I3ITN3   A0A3N0Y370   A0A3B3TRS0   A0A2D0PUJ5   A0A146V7Y5   A0A1W5AXF6   H2MY87   H3B648   A0A3Q2P658   A0A3B4EJ76   M4ADJ6   A0A3B5LKE6   W5L2N1   A0A3B3Z2N1   A0A087YCV8   A0A3P9P357   A0A3B5AVD3   H2TCK3   A0A3Q3L5Q6   A0A3B5AI42   A0A3Q2ZZ48   A0A3Q3Q4K4   A0A3Q1J5S3   L5KJZ4   A0A0P7X1D6   M7BDY6   A0A3P9J202   A0A2I4CK14   A0A212CZ80   A0A0P7VKS7   W5MIF8  

Pubmed

26354079    22118469    28756777    19121390    26227816    18362917    + More
19820115    20798317    20566863    21719571    24845553    24495485    17994087    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25348373    25830018    30249741    24438588    12364791    24508170    25474469    21282665    28812685    23254933    23594743    17554307    9215903    23542700    25329095    21551351    23258410    23624526   

EMBL

ODYU01005769    SOQ46968.1    KQ461190    KPJ07215.1    KQ459590    KPI97332.1    + More
AGBW02010462    OWR48462.1    KZ150049    PZC74443.1    BABH01012061    JTDY01001663    KOB73216.1    KQ971321    EEZ99478.2    GEDC01011562    JAS25736.1    GL449978    EFN81650.1    DS235012    EEB10443.1    GL436778    EFN71481.1    GL888326    EGI62775.1    KQ980800    KYN12830.1    AJWK01002229    AJWK01002230    AJWK01002231    AJWK01002232    AJWK01002233    KQ978379    KYM94408.1    KQ982130    KYQ59819.1    KQ981560    KYN39972.1    KQ976599    KYM79493.1    GDHF01003715    JAI48599.1    KK852879    KDR14463.1    GAMC01020830    JAB85725.1    CM000159    EDW94171.2    CH964095    EDW79098.1    CH954178    EDV51444.1    OUUW01000002    SPP76778.1    CH916366    EDV97076.1    AY089649    AAL90387.1    CM002912    KMY99036.1    CH480815    EDW41136.1    AE014296    BT044576    AAF50030.3    ACI16538.1    CH940647    EDW70946.1    CH933809    EDW19324.2    GAKP01001820    JAC57132.1    GBXI01009466    JAD04826.1    CH902618    EDV39375.1    QOIP01000009    RLU18723.1    ATLV01024388    KE525351    KFB51303.1    CVRI01000004    CRK87477.1    KQ435732    KOX77414.1    CCAG010023484    KZ288212    PBC32873.1    APCN01003266    JR053095    AEY61855.1    AAAB01008986    EAA00209.4    KK107622    EZA48436.1    KQ434846    KZC08240.1    UFQS01000131    UFQT01000131    SSX00238.1    SSX20618.1    CM000363    EDX10110.1    GBBI01002587    JAC16125.1    ACPB03004220    GL766194    EFZ15479.1    ABLF02018654    GGMR01019314    MBY31933.1    GGMS01015341    MBY84544.1    GFXV01005502    MBW17307.1    KQ773232    OAD52410.1    JH431789    HACA01013783    CDW31144.1    NEDP02001668    OWF52727.1    KK121803    KFM81262.1    AMQN01004483    KB293638    ELU15721.1    CR792426    CR792438    CT573425    RJVU01053643    ROL28001.1    GCES01072892    JAR13431.1    AFYH01087967    AFYH01087968    AFYH01087969    AYCK01012469    KB030715    ELK10858.1    JARO02004750    KPP67972.1    KB579886    EMP26432.1    MKHE01000010    OWK11266.1    JARO02001866    KPP74196.1    AHAT01013613    AHAT01013614   

Proteomes

UP000053240    UP000053268    UP000007151    UP000005204    UP000037510    UP000007266    + More
UP000008237    UP000009046    UP000000311    UP000007755    UP000078492    UP000092461    UP000078542    UP000075809    UP000078541    UP000078540    UP000027135    UP000002282    UP000192223    UP000192221    UP000007798    UP000008711    UP000268350    UP000001070    UP000001292    UP000000803    UP000008792    UP000009192    UP000007801    UP000279307    UP000030765    UP000183832    UP000053105    UP000092444    UP000242457    UP000075840    UP000005203    UP000007062    UP000053097    UP000076502    UP000000304    UP000015103    UP000007819    UP000085678    UP000242188    UP000054359    UP000014760    UP000000437    UP000261500    UP000221080    UP000192224    UP000001038    UP000008672    UP000265000    UP000261440    UP000002852    UP000261380    UP000018467    UP000261480    UP000028760    UP000242638    UP000261400    UP000005226    UP000261640    UP000264800    UP000261600    UP000265040    UP000010552    UP000034805    UP000031443    UP000265200    UP000192220    UP000018468   

PRIDE

H9JQJ5    Q8SXG5    Q9VTL8   

Pfam

PF00646   F-box        + More
PF13516   LRR_6
PF12937   F-box-like

Interpro

IPR006553   Leu-rich_rpt_Cys-con_subtyp        + More
IPR036047   F-box-like_dom_sf       
IPR032675   LRR_dom_sf       
IPR001810   F-box_dom       
IPR001611   Leu-rich_rpt       

SUPFAM

SSF81383   SSF81383       

Gene 3D

3.80.10.10    

ProteinModelPortal

A0A2H1W1M7   A0A194QQH0   A0A194PVI1   A0A212F419   A0A2W1BRR0   H9JQJ5   + More
A0A0L7LDG0   D6WDC3   A0A1B6DJ65   E2BRQ6   E0VAN7   E2A4Z4   F4WSN2   A0A195DIX6   A0A1B0C9D5   A0A195C2J0   A0A151XHE0   A0A195FI88   A0A151I0T1   A0A0K8WC17   A0A067QW04   W8ACT2   B4PFM2   A0A1W4W8M2   A0A1W4VV22   B4N4M4   B3NGY7   A0A3B0K089   B4J2J1   Q8SXG5   A0A0J9RTD9   B4HEW7   Q9VTL8   B4LCQ4   B4KUR8   A0A034WS40   A0A0A1X1V0   B3M4A5   A0A3L8DEY5   A0A084WM59   A0A1J1HHJ7   A0A0N0BIG5   A0A1S4G7X2   A0A1B0FI85   A0A2A3EM42   A0A2C9GQ34   A0A088A9T9   V9ILB3   Q7PZW8   A0A026VY90   A0A154PAM3   A0A336K9B2   B4QQ92   A0A023F3W1   T1ICJ9   E9IVB6   J9K260   A0A2S2PR86   A0A2S2R3N7   A0A2H8TSZ1   A0A310SFT3   T1J1V4   A0A1S3K0D5   A0A0K2TYP2   A0A210QVG4   A0A087UV73   R7VHG4   I3ITN3   A0A3N0Y370   A0A3B3TRS0   A0A2D0PUJ5   A0A146V7Y5   A0A1W5AXF6   H2MY87   H3B648   A0A3Q2P658   A0A3B4EJ76   M4ADJ6   A0A3B5LKE6   W5L2N1   A0A3B3Z2N1   A0A087YCV8   A0A3P9P357   A0A3B5AVD3   H2TCK3   A0A3Q3L5Q6   A0A3B5AI42   A0A3Q2ZZ48   A0A3Q3Q4K4   A0A3Q1J5S3   L5KJZ4   A0A0P7X1D6   M7BDY6   A0A3P9J202   A0A2I4CK14   A0A212CZ80   A0A0P7VKS7   W5MIF8  

PDB

5JH5     E-value=0.000409174,     Score=104

KEGG

101743091    K10282 F-box and leucine-rich repeat protein 16 | (RefSeq) F-box/LRR-repeat protein 16

GO

GO:0019005   GO:0031146   GO:0006511   GO:0016567   GO:0005515   GO:0008270   GO:0006468   GO:0006813   GO:0008076   GO:0005216   GO:0006811   GO:0016020   GO:0005634   GO:0006260  

Length:

453

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.49334

Exp number, first 60 AAs:

0.00037

Total prob of N-in:

0.00329

outside

1  -  453

 

 

Pi

208.900447

Theta

196.036954

Tajima's D

-0.71804

CLR

0.406858

CSRT

0.193740312984351

Interpretation

Uncertain