SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06593  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011803
Annotation
hypothetical_protein_KGM_06034_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.873 Nuclear   Reliability : 1.746
 

Sequence

CDS
ATGGCGAATCCGTCATCAGGCGTTGTGGTGCCACGGAATTTTCGTCTCTTAGAAGAACTTGAACAAGGCCAAAAGGGAGTGGGCGATGGAACCATTTCTTGGGGTCTTGAAAGCGATGATGATATGACTCTTACTCATTGGACTGGAATGATTATTGGCCCACCAAGGACACCCTACGAGAATAGAATGTACTCCCTTAAAATTGAATGTGGAACACGATACCCTGATGAGCCACCAACAGCCCGCTTTATTTCTAGGATTCATATGAACTGTGTCAATAGTCAAACTGGACTTGTGGATAATAGACAAGTCCCAATTCTTGCTAGATGGCAGCGTGACTATACCATCAAAACAGTTCTTCAAGAAGTGAGACGTCTCATGACTCTTAAAGATAACATGAAGCTTTCTCAGCCACCAGAGGGAAGCACTTTCTAG
Protein
MANPSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQEVRRLMTLKDNMKLSQPPEGSTF

Summary

EMBL
BABH01012067    KZ150049    PZC74445.1    GAIX01014551    JAA78009.1    AGBW02010462    + More
OWR48456.1    KQ461190    KPJ07238.1    KQ459590    KPI97307.1    JTDY01001663    KOB73215.1    ODYU01005769    SOQ46970.1    GL761846    EFZ22695.1    KK852815    KDR15802.1    KQ971329    EFA01155.1    GECZ01006390    JAS63379.1    KQ434870    KZC09513.1    GL446000    EFN88620.1    GL439266    EFN67604.1    GALX01003151    JAB65315.1    KZ288303    PBC28811.1    JR050016    AEY61156.1    KQ981979    KYN31474.1    ADTU01001531    GEDC01021443    JAS15855.1    KQ414755    KOC61729.1    GL887491    EGI71066.1    GEBQ01027133    JAT12844.1    KK107119    QOIP01000009    EZA58566.1    RLU18291.1    KQ771134    OAD52546.1    AAZX01001186    GEMB01003947    JAR99309.1    GDKW01000887    JAI55708.1    GAHY01000834    JAA76676.1    GEZM01074988    JAV64357.1    GFTR01002572    JAW13854.1    GECL01003500    JAP02624.1    GBGD01003328    JAC85561.1    GGMS01001495    MBY70698.1    AAAB01008807    EAA04120.4    EDO64746.1    EDO64747.1    APCN01003693    ABLF02032252    ABLF02032255    AK342922    BAH72755.1    GGFL01004196    MBW68374.1    GGFM01003465    MBW24216.1    GGFK01008623    MBW41944.1    AXCM01009146    AXCN02000558    KQ976625    KYM79028.1    KQ982585    KYQ54296.1    LJIJ01000096    ODN02770.1    KQ977642    KYN00943.1    CVRI01000035    CRK92682.1    AJVK01028397    ACPB03006890    GBHO01006173    GBRD01011566    GDHC01003645    JAG37431.1    JAG54258.1    JAQ14984.1    GALA01000627    JAA94225.1    KQ435727    KOX78093.1    APGK01055166    KB741261    KB632344    ENN71579.1    ERL93044.1    AK417736    BAN20951.1    DQ440255    CH477810    ABF18288.1    EAT36006.1    JXUM01015680    JXUM01015681    JXUM01015682    JXUM01015683    GAPW01005693    KQ560437    JAC07905.1    KXJ82418.1    KQ979609    KYN20165.1    GBRD01011565    GDHC01016143    JAG54259.1    JAQ02486.1    GANO01002538    JAB57333.1    GAMD01002298    JAA99292.1    CH902618    EDV40352.1    CH379069    EAL29490.2    GDAI01001425    JAI16178.1    KK854924    PTY19713.1    CH479206    EDW30857.1    JXUM01097907    KQ564381    KXJ72361.1    APGK01044177    BT127407    KB741021    KB631749    AEE62369.1    ENN75012.1    ERL85787.1    GDHF01024440    JAI27874.1    GAKP01003401    JAC55551.1    GBXI01009636    JAD04656.1    JH429910    LJIG01001521    KRT85419.1    CH916366    EDV96321.1    DS235269    EEB14119.1    CH963847    EDW73022.1    CH480817    EDW50571.1    CH954178    EDV51010.1    CM000363    CM002912    EDX09309.1    KMY97732.1    AE014296    AY060384    KX531865    AAF50784.1    AAL25423.1    AHN57965.1    ANY27675.1    AY232007    CM000159    AAR10030.1    EDW93499.1    CH940647    EDW69292.1    CH933809    EDW18630.1    OUUW01000002    SPP76919.1    GFDF01004442    JAV09642.1   
Pfam
PF00179   UQ_con
Interpro
IPR000608   UBQ-conjugat_E2        + More
IPR016135   UBQ-conjugating_enzyme/RWD       
SUPFAM
SSF54495   SSF54495       
Gene 3D
PDB
5AIT     E-value=1.53622e-56,     Score=549

Ontologies

Topology

Length:
144
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00235
Exp number, first 60 AAs:
0.00231
Total prob of N-in:
0.08087
outside
1  -  144
 
 

Population Genetic Test Statistics

Pi
86.930083
Theta
94.48115
Tajima's D
-0.250467
CLR
18.322507
CSRT
0.309934503274836
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 VANVSLLALYK 100.00 2e-06
26822097 TVIQEVR 100.00 4e-05
26280517 IDVNVDR 100.00 4e-05
27102218 QVPIIAR 100.00 4e-05
28467696 IECAGVICIEPFKK 100.00 4e-05
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