SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06590  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011672
Annotation
PREDICTED:_protein_disulfide-isomerase_TMX3_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 3.308
 

Sequence

CDS
ATGAAGTTCATTACGGGATTATACATTATATTTTTTACAAGAATATTTAACGTGTCATCATCTAGAGTTTTAGAACTAAGTGACAGATTTTTAGAGTTTAGCAAAGATGGAATGTGGTTTGTTAAATTCTATGCGCCTTGGTGTTCACACTGTCGGCGCATGGAACCTACTTGGGCGCATGTGGCACAAGCCTTGTATAATACTCCCGTAAAAGTAGCCAAAGTCGATTGTACCCGTTTTACAGCTGTGGCCTCACATTTTCATATCCGAGCTTATCCTACTATCTTGTTTTTAAAAGGATCTTTTCAGCATGAATACACAGGAGATAGGGTTAAAGAGGATTTGATTAATTATGCAATGAGAATGTCACAGCCAGCAGTGCAGAGAATATCTCGTGGTAACAGCATTGAATATTTAAAAGAATCTCATCCTGTATTTTTTGGATTCATTGGCAAACAGGAAGGGCTTTTATGGGAAATGTTTACAATTCATGCTGAGAAATATCAGCCTCATTCCTGGTTTTATGCAATGACCCATGAAGTAATAAAACATGAAATCAAAGTTCCTAATGAAACAGCTATATTTGTTTATAAAGATAATGAAGCATTTTTCTTTGAAGTTAAAGATGAATTACTTGAAGACAAAAATATGTTAAACAACACCTTAGGCAAATGGATTACTTCTGAGAGATTTGGTTTTTTCCCCAAAATAACCCGAGCAAATATTAATAGTCTGATTGATACTGAAAAATATATTGTGATAGTAGTAGTTGCAGAAAATAAACTTGAAGAAATATCACAAACTGAAAGAGATTTTAAAGATATGGTAGAAGGAATTATAATGAAAAGAAAAAATGAGCTACATTCTCGTTTTCAGTTTGGTTGGATGGGTTCACCAGAACTAGCAAATTCTATTGCTATGTCTGAACTTACTGTACCTCATTTATTAGTATTAAACTCAACGACAAGTCATCATCATATTCCAGACGATGATCCAGTATTAATGACACCAGAAGCAATCTCACTGTTTCTTGATCAAATACACAACCAGCAAGCTACCGTATATGGTGGCAATGGCTGGCCAGTAAAACTATATAGAGGTTTCTTTGAAGCAAGAACTACATTGGCAAACATGTGGCATGGAAACCCTGTTCTAACAGCTCTTATCTTTGGTCTGCCACTGGGATTCCTCTCACTGATATGCTATTCAGTGTGTTGTGCTGATATTTTAGATGCTGAAGACGAAGACACACCAGAACTACACGAGAAAAGGGACTAA
Protein
MKFITGLYIIFFTRIFNVSSSRVLELSDRFLEFSKDGMWFVKFYAPWCSHCRRMEPTWAHVAQALYNTPVKVAKVDCTRFTAVASHFHIRAYPTILFLKGSFQHEYTGDRVKEDLINYAMRMSQPAVQRISRGNSIEYLKESHPVFFGFIGKQEGLLWEMFTIHAEKYQPHSWFYAMTHEVIKHEIKVPNETAIFVYKDNEAFFFEVKDELLEDKNMLNNTLGKWITSERFGFFPKITRANINSLIDTEKYIVIVVVAENKLEEISQTERDFKDMVEGIIMKRKNELHSRFQFGWMGSPELANSIAMSELTVPHLLVLNSTTSHHHIPDDDPVLMTPEAISLFLDQIHNQQATVYGGNGWPVKLYRGFFEARTTLANMWHGNPVLTALIFGLPLGFLSLICYSVCCADILDAEDEDTPELHEKRD

Summary

EMBL
BABH01012070    ODYU01005769    SOQ46973.1    KZ150049    PZC74448.1    NWSH01000661    + More
PCG74950.1    AGBW02010462    OWR48460.1    KQ459590    KPI97330.1    KQ461190    KPJ07217.1    JTDY01003618    KOB69253.1    GFDF01004047    JAV10037.1    GFDF01004048    JAV10036.1    GFDL01009555    JAV25490.1    DS232080    EDS34208.1    APCN01004377    AXCM01001426    ADMH02001337    ETN62963.1    AAAB01008960    EAA11944.3    AXCN02000935    GGFJ01005657    MBW54798.1    GGFJ01005576    MBW54717.1    ATLV01011192    KE524650    KFB35935.1    GGFJ01005007    MBW54148.1    GGFK01011498    MBW44819.1    JXUM01029021    JXUM01029022    KQ560839    KXJ80665.1    CH477395    EAT41861.1    NEVH01017447    PNF24377.1    GEDC01007532    JAS29766.1    GEBQ01018914    JAT21063.1    GFDF01004097    JAV09987.1    GECZ01012244    JAS57525.1    GEBQ01000827    JAT39150.1    AJWK01015937    AJWK01015938    AJWK01015939    ACPB03013538    ACPB03013539    LJIG01022694    KRT79210.1    AK417548    BAN20763.1    GFTR01006080    JAW10346.1    KK852777    KDR16743.1    KQ971327    EEZ99618.1    GEDC01020167    JAS17131.1    GL767232    EFZ13968.1    CVRI01000054    CRL00032.1    GEZM01003080    GEZM01003079    JAV96932.1    ADTU01017117    GL447336    EFN86546.1    GBHO01020176    GDHC01000604    JAG23428.1    JAQ18025.1    KJ939606    AJE70277.1    KQ414681    KOC63943.1    PYGN01000579    PSN43899.1    GL442637    EFN63198.1    KQ978068    KYM97613.1    JRES01000645    KNC29623.1    FX985550    BBF97884.1    GBXI01012382    JAD01910.1    UFQT01000289    SSX22831.1    QCYY01001116    ROT80473.1    CH964095    EDW79361.1    KQ434870    KZC09487.1    CH902618    EDV40030.1    GAMC01006428    JAC00128.1    CM000159    EDW95468.1    CH940647    EDW68524.1    GDHF01003412    JAI48902.1    GAKP01010678    JAC48274.1    CM002912    KMY99969.1    CH480815    EDW41690.1    AE014296    AY051696    AAF49525.3    AAK93120.1    CH954178    EDV52222.1    CH933809    EDW17445.1    CP012525    ALC43933.1    QOIP01000014    RLU14737.1    CH916366    EDV95712.1    JXJN01024845    KK107405    EZA51207.1    DS235149    EEB12518.1    CCAG010006833    KQ976394    KYM93250.1    NNAY01001103    OXU25133.1   
Pfam
PF00085   Thioredoxin
Interpro
IPR036249   Thioredoxin-like_sf        + More
IPR013766   Thioredoxin_domain       
IPR017937   Thioredoxin_CS       
SUPFAM
SSF52833   SSF52833       
PDB
1X5D     E-value=3.47892e-16,     Score=208

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.638737
 
 
Length:
425
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
18.35379
Exp number, first 60 AAs:
0.3136
Total prob of N-in:
0.02620
outside
1  -  425
 
 

Population Genetic Test Statistics

Pi
226.380457
Theta
210.219127
Tajima's D
0.206283
CLR
0.033531
CSRT
0.421828908554572
Interpretation
Uncertain
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