Silkworm Genome Informatics Database

Gene

KWMTBOMO06589

Pre Gene Modal

BGIBMGA011805

Annotation

hypothetical_protein_KGM_06054_[Danaus_plexippus]

Location

Bomo_Chr11(-):11205050-11211591 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.425

CDS

ATGCCTGCTTCCATTTGCGACCCAGTAACGAGCGCATTGCGTTTATCTCTAACTCAAGACGATTCTCAAAGCTCATCCTTGTTGGATAGCCGTCTATATTCCTCGACTAAAAGTGTTCTTTTATCTAAGATCGACTTTGAAGAATCTGGCGACTATCAAAGTAACGTTCTTGATGGACTCAAGTCTAAGTACGTGGTTATTCGACCAAAAAAAACTATTCATGACCCTAAACCTTTTAAAAAAGATAGCGCAAGCAACAGCCAATGCTTAGAGAACAGTAAATCTGTAGAAGATGGTTTACCTAAGCCTAAAAGGATTTTGTTTCCCCTTGAAAAAGTGCAATTGGGTTGGCAGAGTCCATGGGCAGCAGGAGCTGGAATGCAAAATGTGGGCAATACCTGTTACCTGAATTCCACCTTACAGGCACTGTTCCATGTTCCTGCATTAGCTAATTGGTTGATGTCTGAATCAACTCATACTGAAAAATGTAATCAACAAGAGGCATGTGTAATATGCGGAATGCGTGCCAGCCTGATGGCAACACAAAAGGGTGGCGGTGCTCCCATAAAGCCATGGCAAGTTTATTCCAAACTCCGCCTTATCTGTAGACATTTGACTCCCGGAAGGCAAGAAGATGCACATGAATTTCTAAGATACTTAGTAGAAGCAATGGAAAAATGCTATTTGTTACGGTTCATAAATTCTGATAAATTGGATCAATATAGTAAAGAGACCACTCCACTGAACCAGATACTGGGTGGGTATCTAAGATCTACAGTACGCTGCTTATCCTGCCATCATTTGTCCACTACTTATCAGCATTTCCAGGATTTATTACTAGATATAAGGAAACATTCAACATTGGATGAGGCTTTAGACTCATTTTTTTCGAGAGAAAGGTTGGAAGACTTGGGTTATAAATGTGAAGCATGTAACAAAAAGGTATCAGCCACAAAACAGTTTTTTGTGGAGAGAGCTCCAATGGTTTTGTGTATTGCATTGAAAAGATTTTCACTGGCAGGAGGAAAACTATCAAAACATGTGCAGTTCAGGAAGAAAATAAGTTTGAATAAATATATTTATAGCAAACACTCACATCAACAGCTGTCTTATAAATTAGTAAGTTTAGTAACACATCTTGGTCCATCACAAAATTGCGGACACTACACTGCCATAGGCCAAGCACCCAATGGGAACTATTATCAATTTGATGATAGCTGTGTGAGACCTCTTCCTTTATCAGCAGTTTTGGGAACCAATGCCTATATAATGTTTTTTGAAAAAGATAATAGTAGCGAAGACATATGCACTTCTGTGGCTACGACTTCGGGTGTGATTTACGGCCCGCAACTTCCAGAAAGTATTCTCAACAGAGAAAAAAGTCCTTTAAAACTTACATTCTACAGAAACGATGAAAGGAAACCTATGCTTAATAGCACTTCCACAGAAGCTCCGAAACCGATAATTTTAAACAGTACATTGAGTAATTCCGAAAACTCTTCAAATGTCATTAATTCAGAACCTTGGGTTGTGAAACAAAACGGGGAAATAGAAAAAGTCATACAGACACCAAAAACAATTAACGGTATTGATAAAGGTCAGAAAGTTGATGATGAAAAACGGATCAGTTTTGTAATTAAAAGGCAAAACAATGAAGATGTACAGATAAAACCGAAAGCATGTAAAAGCGATTCTAATATGAAATTAGTCGCAAACAATGTAAAGGTAGCTGATCAGCCGGTTTCCATCAGCAAACTCTTAAAACCATTTAAATCTCCTCTTGAAAAATTAGAGGAACAAATGAACAAAAACGATGGCGGTGAACTTATTCAGAAAAACGATAGCTCCAGTTCAAGGTTGGTTCCTTACGACTCCGAGTCTAGTGGCGATGAACGCGGTGATCGGAACGGTGACGATCCGACCAAGAGGATCCCTGGGAAAGACGCAGGACGGAAACCGAAACCGAGCCGATGCGAGTCTCCACGGCGACTCGTTGTCACCACGAAAAGCTCCTGGACGGTGTCCAGTGAGAAAAGCGGACCCCTCCTCAGTCCCAGTTTGAACGGCGACACTAATAAAAAGGTGAAGGAAGAGCGCGGTGAGAGCTCGCAGCAGAGTCCGCACACGAGTGTGAGCAGCATGTCTCCCCTCAGCGACCGTGGCGAGCTGAGCCCGGGCGCCGTGACGCGCGCTCTGCAGACGGCCTCGCACCGCGGGTACGGCGCGCCCGTCGCCGCCTGGTCCGGCGCACACAGCGCGCTCTCCCGCCAGGTGTTTGAAGAAAGACGCGAGGAAAGAAAGCGAGCCGCGGAGTCGATCGACGATATGGATTGCGGTCGAGTTAAGAAAGTTAAAAATTTTCATCACTTCAATCGGTTCAATAACAATAGGAACGGCTACAATCCCTTCCAGGAAAAACAAAACAAATTGCACTGGGGAGGAGGCAACTTTAAATATCGGAATGAAAGACGTTCGCACCATTTCAACAAGCATCACAACAATAAGTACAAGAGATTTAATAGGTACAGCAACGGACACCATTACCCGAGGCACCATTGA

Protein

MPASICDPVTSALRLSLTQDDSQSSSLLDSRLYSSTKSVLLSKIDFEESGDYQSNVLDGLKSKYVVIRPKKTIHDPKPFKKDSASNSQCLENSKSVEDGLPKPKRILFPLEKVQLGWQSPWAAGAGMQNVGNTCYLNSTLQALFHVPALANWLMSESTHTEKCNQQEACVICGMRASLMATQKGGGAPIKPWQVYSKLRLICRHLTPGRQEDAHEFLRYLVEAMEKCYLLRFINSDKLDQYSKETTPLNQILGGYLRSTVRCLSCHHLSTTYQHFQDLLLDIRKHSTLDEALDSFFSRERLEDLGYKCEACNKKVSATKQFFVERAPMVLCIALKRFSLAGGKLSKHVQFRKKISLNKYIYSKHSHQQLSYKLVSLVTHLGPSQNCGHYTAIGQAPNGNYYQFDDSCVRPLPLSAVLGTNAYIMFFEKDNSSEDICTSVATTSGVIYGPQLPESILNREKSPLKLTFYRNDERKPMLNSTSTEAPKPIILNSTLSNSENSSNVINSEPWVVKQNGEIEKVIQTPKTINGIDKGQKVDDEKRISFVIKRQNNEDVQIKPKACKSDSNMKLVANNVKVADQPVSISKLLKPFKSPLEKLEEQMNKNDGGELIQKNDSSSSRLVPYDSESSGDERGDRNGDDPTKRIPGKDAGRKPKPSRCESPRRLVVTTKSSWTVSSEKSGPLLSPSLNGDTNKKVKEERGESSQQSPHTSVSSMSPLSDRGELSPGAVTRALQTASHRGYGAPVAAWSGAHSALSRQVFEERREERKRAAESIDDMDCGRVKKVKNFHHFNRFNNNRNGYNPFQEKQNKLHWGGGNFKYRNERRSHHFNKHHNNKYKRFNRYSNGHHYPRHH

Similarity

Belongs to the peptidase C19 family.

Uniprot

A0A2H1W393 A0A2A4JTC6 A0A2W1BH71 A0A194PWC8 A0A194QNZ5 A0A212F3Z2 + More
A0A0L7L1E9

Pubmed

28756777 26354079 22118469 26227816

EMBL

ODYU01005769 SOQ46974.1 NWSH01000661 PCG74948.1 KZ150049 PZC74449.1 + More
KQ459590 KPI97308.1 KQ461190 KPJ07237.1 AGBW02010462 OWR48455.1 JTDY01003618 KOB69250.1

Proteomes

UP000218220 UP000053268 UP000053240 UP000007151 UP000037510

Pfam

PF00443 UCH

Interpro

IPR028889   USP_dom        + More
IPR001394   Peptidase_C19_UCH
IPR038765   Papain-like_cys_pep_sf
IPR018200   USP_CS

SUPFAM

SSF54001 SSF54001

ProteinModelPortal

A0A2H1W393 A0A2A4JTC6 A0A2W1BH71 A0A194PWC8 A0A194QNZ5 A0A212F3Z2 + More
A0A0L7L1E9

PDB

4FK5 E-value=2.35226e-33, Score=359

KEGG

101743899 K11855 ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] | (RefSeq) ubiquitin carboxyl-term

GO

GO:0006511 GO:0016579 GO:0036459 GO:0005249 GO:0006813 GO:0008076 GO:0005216 GO:0006811 GO:0016020 GO:0005634 GO:0006260

Length:

852

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00529999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00022

outside

1 - 852

Pi

126.3927

Theta

152.656859

Tajima's D

-0.695374

CLR

258.433354

CSRT

0.197590120493975

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics