Gene

KWMTBOMO06583

Pre Gene Modal

BGIBMGA011808

Annotation

PREDICTED:_lariat_debranching_enzyme_[Amyelois_transitella]

Location

Bomo_Chr11(-):11056311-11060051      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.925

CDS

ATGAAAATAGCAGTGGAAGGATGCGCTCATGGAGAATTAGACAAAATCTACGATTGCATAGAAACATTACAAGAGAGAGAAGGTTTTAAGATTGATTTGTTAATATGTTGCGGTGACTTTCAATCTGTACGAAATGCCGCTGATTTACGTGCAATGGCTGTACCCGAGAAATATCAACGCATGTGCACATTTTACAAATATTACAGTGGGGAGAAGAAGGCACCTGTATTAACATTATTTATTGGTGGAAACCATGAAGCTTCAAACTATCTACAGGAGCTTCCGTATGGTGGGTGGGTGGCTCCCAATATATACTACATGGGACGTGCTGGTGTTGTTAAGTTTGGAGAACTGAGGATTGGTGGATTATCAGGAATATTCAAAGGGCATGATTACCTGCAAGGCCTCTGGGAATGTTTGCCCTACAACCAAAACTCCATGAGGTCTGTGTATCATATCAGGTCACTAGATGTCTTTAGATTATCTCAATTGAAAGAAAAACTACATGTAATGTTGACACATGACTGGCCTCGTGGTATTACAGATTATGGAGACAAAGATCACTTGTTGAGAAGAAAACCTTTTTTAAGGGAAGATATTGAATCAAACCAATTAGGTAGTATGCCTGCAGAAAAATTACTTCATACATTGAAACCAGATTACTGGTTTGCAGCACATTTGCACTGTCAATTTGCAGCATTGGTCAAACATGAAGATAACAGGGAAACGAAGTTTCTTGCTCTGGACAAATGTTTGCCAAAACGTAGACATTTACAAATATTAGATCTACCTCATGAGTATGATGGAGATAAATGCTTGAAACATGATGCAGAATGGTTAGTTGTGTTGAAGAATACAAATCATCTGCTGAATGTTAAAAACATGGAGGGTCATCTACCTGGACCGGGCGGAAATGAAAGGTACAATTTTACCCCAACCAATGAAGAAAAAGAAATTTTAATTCAGTCCTTGCAAAATTTGGCTATTACATCTGAAAATTTCGTCAAAACTGCACCTGCATACAAGCCAGGAGCTCCCAAAGCATATCTCACAGACCCTATACTAAATCCACAGACAGTAGATTTATGTGAGAAATTAGGTATTGATGATCCTGTACAAGTGATTATGGCACGAGCAGGCAGAGTTATGGAGAAACCAACTGATGTCGATATTGTTGAAACGAAAGCAGATCTCAATCCAGTACTAAAAACACCTATGTCAAAACTAATTTTACCAGCACCTGTGACACCTAGTGAAAATGATTGTGAAGAAAATACATGTACAACACCTATTTCAGAAAATCCCTTATTATTAGATAGTTTATGTAATACTTCTGAATGTACGACTCCTACTTCAATTAGTGGGAAGAAAACATTCAAGAGGCGAAATATATCAATTTATAGTTCCACAGAAGAAGAGAGTCAAAGTATGAACTCAAGTTCCTTAGTAAGTCCAACCAGTCCATCAAAATATCCTAGGGGTAATATTGAATAA

Protein

MKIAVEGCAHGELDKIYDCIETLQEREGFKIDLLICCGDFQSVRNAADLRAMAVPEKYQRMCTFYKYYSGEKKAPVLTLFIGGNHEASNYLQELPYGGWVAPNIYYMGRAGVVKFGELRIGGLSGIFKGHDYLQGLWECLPYNQNSMRSVYHIRSLDVFRLSQLKEKLHVMLTHDWPRGITDYGDKDHLLRRKPFLREDIESNQLGSMPAEKLLHTLKPDYWFAAHLHCQFAALVKHEDNRETKFLALDKCLPKRRHLQILDLPHEYDGDKCLKHDAEWLVVLKNTNHLLNVKNMEGHLPGPGGNERYNFTPTNEEKEILIQSLQNLAITSENFVKTAPAYKPGAPKAYLTDPILNPQTVDLCEKLGIDDPVQVIMARAGRVMEKPTDVDIVETKADLNPVLKTPMSKLILPAPVTPSENDCEENTCTTPISENPLLLDSLCNTSECTTPTSISGKKTFKRRNISIYSSTEEESQSMNSSSLVSPTSPSKYPRGNIE

Uniprot

H9JQK2   A0A3S2LUF9   S4NSN7   A0A2A4J4Y8   A0A1E1WKW8   A0A212EL36   + More
A0A194QQI3   A0A0L7L1U3   A0A194PWD3   A0A2H1VG55   A0A2W1BLA8   A0A2W1BP07   A0A1Q3EYY6   U4UA57   N6U4P2   B0WC77   A0A182GF62   D6WDD9   A0A336LVS1   W5JGV9   A0A0P6JRZ8   A0A3F2YQ97   A0A336MVD9   A0A1B6LZV8   A0A1L8DFX6   A0A069DVC4   A0A182K0Q0   A0A182MJ64   A0A182PIW0   A0A0P5TF60   A0A182WI35   A0A0P5FXV0   A0A0P5VUY7   A0A164W622   A0A1B0C9U2   A0A0V0GBC9   A0A1B6DWG1   A0A182R6P7   A0A0P5C9K7   A0A0P5XMW2   A0A1B6CUA3   A0A1W4XE65   A0A1B6FR46   A0A0L0C1Y1   A0A182Y888   A0A182N7F9   A0A1Z5KXJ4   E9HAB2   A0A2J7PPH4   A0A2J7PPC9   A0A084WMW3   A0A182QEL4   A0A1I8Q5G1   A0A182I6D5   A0A182L402   A0A210QH95   A0A182X275   A0A182VNZ8   A0A182U883   A0A182IY73   A0A195F1D7   A0A0P5TKD7   Q7QIE4   E2A9L0   A0A026WSM6   A0A0P5UZJ4   E0VAQ8   A0A1I8M588   A0A2R5LB18   A0A0P5PPK5   A0A151XB78   K1Q687   A0A2S2QUT4   A0A067RBG6   W8BB13   A0A0P5XEW6   A0A293LZ91   A0A0P4WD94   A0A151I1B3   A0A0N7Z9E9   A0A0P5WT81   A0A0P5BHJ6   A0A195E6Z3   A0A0P6BCB4   J9JWY2   A0A0J7NEI1   A0A2A3EAV4   T1I1S4   A0A3R7N5D6   A0A088AHU7   A0A0P5XBA3   A0A1Y1N083   A0A0P5QL06   V5HSG9   A0A0L7RIE9   A0A131Y1N5   B3M423   A0A0N0U6G0   A0A0A1XSH9   F4X6K4  

Pubmed

19121390    23622113    22118469    26354079    26227816    28756777    + More
23537049    26483478    18362917    19820115    20920257    23761445    26999592    26334808    26108605    25244985    28528879    21292972    24438588    20966253    28812685    12364791    14747013    17210077    20798317    24508170    20566863    25315136    22992520    24845553    24495485    27129103    28004739    25765539    17994087    25830018    21719571   

EMBL

BABH01012081    RSAL01000209    RVE44245.1    GAIX01013997    JAA78563.1    NWSH01003314    + More
PCG66574.1    GDQN01003384    JAT87670.1    AGBW02014142    OWR42195.1    KQ461190    KPJ07230.1    JTDY01003602    KOB69281.1    KQ459590    KPI97313.1    ODYU01002361    SOQ39761.1    KZ150049    PZC74455.1    KZ149973    PZC76001.1    GFDL01014531    JAV20514.1    KB631957    ERL87471.1    APGK01043139    KB741011    ENN75576.1    DS231886    EDS43322.1    JXUM01059292    KQ562045    KXJ76820.1    KQ971321    EEZ99472.1    UFQT01000224    SSX22035.1    ADMH02001223    ETN63597.1    GDUN01000824    JAN95095.1    UFQS01002111    UFQT01002111    SSX13265.1    SSX32703.1    GEBQ01013282    GEBQ01010807    JAT26695.1    JAT29170.1    GFDF01008726    JAV05358.1    GBGD01001123    JAC87766.1    AXCM01002040    GDIP01130850    JAL72864.1    GDIQ01249894    JAK01831.1    GDIP01095946    JAM07769.1    LRGB01001348    KZS12981.1    AJWK01002798    GECL01000883    JAP05241.1    GEDC01007292    JAS30006.1    GDIP01189838    JAJ33564.1    GDIP01082093    JAM21622.1    GEDC01020485    JAS16813.1    GECZ01017101    JAS52668.1    JRES01000997    KNC26266.1    GFJQ02007459    JAV99510.1    GL732611    EFX71275.1    NEVH01022715    PNF18199.1    PNF18204.1    ATLV01024521    KE525352    KFB51557.1    AXCN02000573    APCN01003620    NEDP02003668    OWF48133.1    KQ981864    KYN34191.1    GDIP01125096    JAL78618.1    AAAB01008807    EAA04183.4    GL437917    EFN69900.1    KK107109    EZA59050.1    GDIP01107153    JAL96561.1    DS235012    EEB10464.1    GGLE01002532    MBY06658.1    GDIQ01125734    JAL25992.1    KQ982335    KYQ57607.1    JH818630    EKC26794.1    GGMS01012313    MBY81516.1    KK852567    KDR21191.1    GAMC01016214    JAB90341.1    GDIP01074689    JAM29026.1    GFWV01008647    MAA33376.1    GDRN01067002    JAI64442.1    KQ976580    KYM79900.1    GDKW01000739    JAI55856.1    GDIP01082092    JAM21623.1    GDIP01189837    JAJ33565.1    KQ979568    KYN20958.1    GDIP01017267    JAM86448.1    ABLF02033601    LBMM01006104    KMQ90935.1    KZ288310    PBC28604.1    ACPB03014728    QCYY01001486    ROT77735.1    GDIP01076188    JAM27527.1    GEZM01018711    JAV90045.1    GDIQ01119136    JAL32590.1    GANP01003214    JAB81254.1    KQ414583    KOC70742.1    GEFM01003411    JAP72385.1    CH902618    EDV40385.1    KQ435727    KOX77928.1    GBXI01008331    GBXI01000316    JAD05961.1    JAD13976.1    GL888818    EGI57964.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000007151    UP000053240    UP000037510    + More
UP000053268    UP000030742    UP000019118    UP000002320    UP000069940    UP000249989    UP000007266    UP000000673    UP000069272    UP000075881    UP000075883    UP000075885    UP000075920    UP000076858    UP000092461    UP000075900    UP000192223    UP000037069    UP000076408    UP000075884    UP000000305    UP000235965    UP000030765    UP000075886    UP000095300    UP000075840    UP000075882    UP000242188    UP000076407    UP000075903    UP000075902    UP000075880    UP000078541    UP000007062    UP000000311    UP000053097    UP000009046    UP000095301    UP000075809    UP000005408    UP000027135    UP000078540    UP000078492    UP000007819    UP000036403    UP000242457    UP000015103    UP000283509    UP000005203    UP000053825    UP000007801    UP000053105    UP000007755   

PRIDE

H9JQK2   

Pfam

PF00149   Metallophos        + More
PF05011   DBR1
PF00288   GHMP_kinases_N
PF10509   GalKase_gal_bdg
PF18800   Atthog

Interpro

IPR041816   Dbr1_N        + More
IPR004843   Calcineurin-like_PHP_ApaH       
IPR029052   Metallo-depent_PP-like       
IPR007708   DBR1_C       
IPR006203   GHMP_knse_ATP-bd_CS       
IPR006204   GHMP_kinase_N_dom       
IPR014721   Ribosomal_S5_D2-typ_fold_subgr       
IPR019741   Galactokinase_CS       
IPR019539   GalKase_gal-bd       
IPR000705   Galactokinase       
IPR020568   Ribosomal_S5_D2-typ_fold       
IPR037663   Mosmo       

SUPFAM

SSF54211   SSF54211       

Gene 3D

3.60.21.10     3.30.230.10    

CDD

cd00844  MPP_Dbr1_N

ProteinModelPortal

H9JQK2   A0A3S2LUF9   S4NSN7   A0A2A4J4Y8   A0A1E1WKW8   A0A212EL36   + More
A0A194QQI3   A0A0L7L1U3   A0A194PWD3   A0A2H1VG55   A0A2W1BLA8   A0A2W1BP07   A0A1Q3EYY6   U4UA57   N6U4P2   B0WC77   A0A182GF62   D6WDD9   A0A336LVS1   W5JGV9   A0A0P6JRZ8   A0A3F2YQ97   A0A336MVD9   A0A1B6LZV8   A0A1L8DFX6   A0A069DVC4   A0A182K0Q0   A0A182MJ64   A0A182PIW0   A0A0P5TF60   A0A182WI35   A0A0P5FXV0   A0A0P5VUY7   A0A164W622   A0A1B0C9U2   A0A0V0GBC9   A0A1B6DWG1   A0A182R6P7   A0A0P5C9K7   A0A0P5XMW2   A0A1B6CUA3   A0A1W4XE65   A0A1B6FR46   A0A0L0C1Y1   A0A182Y888   A0A182N7F9   A0A1Z5KXJ4   E9HAB2   A0A2J7PPH4   A0A2J7PPC9   A0A084WMW3   A0A182QEL4   A0A1I8Q5G1   A0A182I6D5   A0A182L402   A0A210QH95   A0A182X275   A0A182VNZ8   A0A182U883   A0A182IY73   A0A195F1D7   A0A0P5TKD7   Q7QIE4   E2A9L0   A0A026WSM6   A0A0P5UZJ4   E0VAQ8   A0A1I8M588   A0A2R5LB18   A0A0P5PPK5   A0A151XB78   K1Q687   A0A2S2QUT4   A0A067RBG6   W8BB13   A0A0P5XEW6   A0A293LZ91   A0A0P4WD94   A0A151I1B3   A0A0N7Z9E9   A0A0P5WT81   A0A0P5BHJ6   A0A195E6Z3   A0A0P6BCB4   J9JWY2   A0A0J7NEI1   A0A2A3EAV4   T1I1S4   A0A3R7N5D6   A0A088AHU7   A0A0P5XBA3   A0A1Y1N083   A0A0P5QL06   V5HSG9   A0A0L7RIE9   A0A131Y1N5   B3M423   A0A0N0U6G0   A0A0A1XSH9   F4X6K4  

PDB

5UKI     E-value=1.8518e-49,     Score=496

KEGG

101744527    K18328 lariat debranching enzyme [EC:3.1.-.-] | (RefSeq) lariat debranching enzyme

GO

GO:0016788   GO:0006397   GO:0005634   GO:0000398   GO:0008419   GO:0006012   GO:0005534   GO:0004335   GO:0005524   GO:0016021   GO:0016787   GO:0008094   GO:0000166   GO:0015299   GO:0006419   GO:0015923   GO:0006260  

Length:

497

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01365

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00406

outside

1  -  497

 

 

Pi

179.145422

Theta

169.673914

Tajima's D

0.47567

CLR

0.375409

CSRT

0.508624568771561

Interpretation

Uncertain