SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO06578  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011810
Annotation
PREDICTED:_uncharacterized_protein_C05D11.9_[Amyelois_transitella]
Location in the cell
Mitochondrial   Reliability : 2.319 Nuclear   Reliability : 2.083
 

Sequence

CDS
ATGGAAGCAGCAGAATTCGACGCCACCCTGGGTGGCACGGAGCAGCTGCCGTTTTCGGCAAACAGCTTAAAATTTGCCGCGTCTAGAAGTATAGAAATAGCAGCAATGACGGAAAGTATTCAACGAACGAACCATAACAAACTTATATTTCAAAACCTACCCGTTCACATGCGACGTCGTGTTATGAGCCATAATAGTAAAAGACTTCCTATAAAACTAAGAGAAGCTCATACAAAGCAGTTTAAAAATAATGGGTTTGCTGTAAAGCAAAAACGACCTTCCAGGAAATATAGACGCCGTCCACAGAACCTATTAGATGAGTACAATCGTCGACAGAAACGCCATAAATGGTTAGAGACACATATATGGCATGCAAAAAGATTTCACATGATAGAAAAGTGGGGTTACCGTTTAGCTTATGCACCTTGTGATAAAGCATTTAGAGCTTGTTACCGAGCTACATCTGCTCACTGTCTGTTACAAGACATCTCTTATGTCACTCCGATAGAAATAAATGGTCCAGTAGATACAATTAAAGAACTGTTTAGTTCAATAACCAGCCCTTCTTGTGGTCTTGGGTTGTGTGCTAAGGCATATATTGATGGTAAACGTGAAGGTATGATTCATCTTTATCAAAGTAACACATATCCCTTTGGATACATTGGCAAATTAAATTTTATTTGGGTGCCACACAAATCCAAAAAAACATTATGGTTATTTGTTCATCCTTCTCAAACTCAGCAAATAGAATCAATATTAACAAATTTAATATATTCAAACAAAAATTACGGTCCTGAAATTACAAAAAAACGCAGGAAATCCGGTGGCATGGATGAAAGTGTGACGATTAAAATAAAAGCAGGAATATTTAACAGATTTCGTTTAACTGGCCCTAATAGCCATGCTGTTCTAACACATAGCCTAAAATGTGTAGAAAGTGCTAAAATTAAAAATGATGACTGGGCAAAGTCTTATGATGACCTTAACTTAGAGGAAAAAGATGAATACTGGGAATCTCTGTCAACATTGAATTCACCATCTCAATTGCCTCCTAAGATTATTATAGGATTGATTGTAAAGGATCCACGATTAAGTAGACCTTCAAAAAGAACAAAAGCAATAATAGAAACAGACACATCATTTGACTCAAACATTGTTCTTAATATACCATCATATGCATCATCCTCACCTTTATGGGATCTAAATATACATGAAAAATTAAAAAAGAAGATTATGTCTAATGCAGAATTTATTCAACACTTGACTAAGACAAAAATTGTTCCTGGAGATATAAATGAGAATGATCCTGTTTTACAAAGTATACCCATTATACTGATACAAAGACCAGGATCACAAGACTCAGATTACAAGAAAATAGGGTATGGAAGCGGTTGGGATATTATAGTTCCAGCTGGTTATGGTTTACCTTTCTGGCTAACTTTTATAATGTTTGGTGGGAGGTCTGGAGGTCTTAGAGAGACTGAGAATTTGGCCTTTGAGATGGGGGAGTGCTACTTCCCTCCAGACTCTGCTGCGGGAAAACTAGAAGAGAAAAGAATAGAGAATGAACTGAAAGAAAAATACTTTCGTCTGCCACCTAGCAAAAGAGTAAATTATATAAAATTAGGTATTAACAGCCCTTTTATTTGCCCTTGGGATTTGTTATTGAAAGATTGGTGTGAAGAACACATTCATGACTTCTTTGTGTTACGAGATAGACAGTTATTGAATCAAATACAGGATTCTATAGACAGGAAAAAACTAATGCCAGAAATTGAAAACTCAAACTCATGCCTCATCCCTGTATACTTGACTCTGAAATCGAGAGGAAATTTAAAACGGCATGCTTTGATTTGTTTACCCGAAGTTACTGACGCCTCTAATATAAAAACATTATTTGAACCACATCATGAAGATCCAAATGAAAAACATAGAAAACAAAAAAGGAAAGAACACCTTAAAGAATTAAAGAAATTCAGAAAGAATCGAATAAAACTGAAAAAACAGGGTCATGCCAGCAATGTTACTAAAAGAACCAACGAGCCTTCTGAATATGTGAGAAATATGCGTCAATTGTGGTTACCATCAAAAATTGATAGTGTGCGTTTTATTGGAACACGGCAAGTTTTGGGTTACTTGTCAATGGGAGCTCTTAGCTTTTCGGAAGCTCGAAGTTGTGGTATTGGATATGTGGCTTACAATGCCCTTTCCGAATTATTAAAAATGGGACAAAATCGAGTATTGGTTCGCAATGTCTCATCACGCAAATATTGGTTAGCAAATATTCAGACAGTAAAGAATGTTTAA
Protein
MEAAEFDATLGGTEQLPFSANSLKFAASRSIEIAAMTESIQRTNHNKLIFQNLPVHMRRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKWLETHIWHAKRFHMIEKWGYRLAYAPCDKAFRACYRATSAHCLLQDISYVTPIEINGPVDTIKELFSSITSPSCGLGLCAKAYIDGKREGMIHLYQSNTYPFGYIGKLNFIWVPHKSKKTLWLFVHPSQTQQIESILTNLIYSNKNYGPEITKKRRKSGGMDESVTIKIKAGIFNRFRLTGPNSHAVLTHSLKCVESAKIKNDDWAKSYDDLNLEEKDEYWESLSTLNSPSQLPPKIIIGLIVKDPRLSRPSKRTKAIIETDTSFDSNIVLNIPSYASSSPLWDLNIHEKLKKKIMSNAEFIQHLTKTKIVPGDINENDPVLQSIPIILIQRPGSQDSDYKKIGYGSGWDIIVPAGYGLPFWLTFIMFGGRSGGLRETENLAFEMGECYFPPDSAAGKLEEKRIENELKEKYFRLPPSKRVNYIKLGINSPFICPWDLLLKDWCEEHIHDFFVLRDRQLLNQIQDSIDRKKLMPEIENSNSCLIPVYLTLKSRGNLKRHALICLPEVTDASNIKTLFEPHHEDPNEKHRKQKRKEHLKELKKFRKNRIKLKKQGHASNVTKRTNEPSEYVRNMRQLWLPSKIDSVRFIGTRQVLGYLSMGALSFSEARSCGIGYVAYNALSELLKMGQNRVLVRNVSSRKYWLANIQTVKNV

Summary

EMBL
BABH01012094    ODYU01001000    SOQ36599.1    GDQN01005291    JAT85763.1    KQ461190    + More
KPJ07223.1    KQ459590    KPI97325.1    RSAL01000209    RVE44251.1    NWSH01000215    PCG78326.1    AGBW02013617    OWR43157.1    JTDY01000048    KOB79186.1    CP012528    ALC48214.1    AJVK01019600    CH916370    EDW00420.1    CH954180    EDV45908.1    GFDL01015418    JAV19627.1    OUUW01000003    SPP78606.1    GDUN01000815    JAN95104.1    DS231984    EDS30434.1    CH933810    EDW07289.1    AJWK01017006    AXCN02001699    JXUM01045638    KQ561445    KXJ78566.1    JRES01000975    KNC26584.1    CH940651    EDW65312.2    CH902622    EDV34381.1    CH379063    EDY72425.1    GEBQ01003508    JAT36469.1    GEZM01024262    JAV87819.1    GEDC01009724    GEDC01003363    JAS27574.1    JAS33935.1    CM000162    EDX01104.1    KQ971319    EFA11371.2    JXJN01008905    CCAG010007842    CH479194    EDW27012.1    CH963851    EDW75155.1    GBXI01003273    JAD11019.1    ATLV01024388    KE525351    KFB51306.1    GAKP01012237    GAKP01012234    JAC46718.1    GDHF01014536    JAI37778.1    NEVH01006722    PNF37106.1    KQ414657    KOC65685.1    APCN01003267    JXUM01027861    KQ560803    KXJ80840.1    KQ434825    KZC07365.1    AF132176    AAD34764.1    GBBI01004159    JAC14553.1    AAZX01010390    AXCM01003003    NNAY01000080    OXU31170.1    KK854505    PTY16433.1    KZ288282    PBC29608.1    KQ435726    KOX78198.1    ACPB03013485    GL887762    EGI70069.1    KQ980612    KYN15164.1    GEZM01024264    JAV87817.1    CVRI01000002    CRK86886.1    ADTU01010385    ADTU01010386    KK107182    EZA55940.1    QOIP01000011    RLU16681.1    KB199650    ESP05473.1    KQ977642    KYN00892.1    KQ981954    KYN32278.1    GBHO01044931    GBRD01001821    JAF98672.1    JAG64000.1    GGMR01015237    MBY27856.1    KQ982101    KYQ60022.1    GEDC01011604    JAS25694.1    GFXV01006752    MBW18557.1    GBYB01000466    JAG70233.1    KRF82178.1    GFTR01007754    JAW08672.1    GGMS01015865    MBY85068.1    GAMC01014511    JAB92044.1    RQTK01000039    RUS90150.1    ABLF02032470    GFJQ02006023    JAW00947.1    LRGB01001581    KZS11204.1    GDIQ01092385    JAL59341.1    GDIQ01115185    JAL36541.1   
Pfam
PF08170   POPLD        + More
PF06978   POP1
Interpro
IPR039182   Pop1        + More
IPR009723   Pop1_N       
IPR012590   POPLD_dom       
PDB
6AHU     E-value=1.25227e-93,     Score=878

Ontologies

Topology

Length:
768
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.810799999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00656
outside
1  -  768
 
 

Population Genetic Test Statistics

Pi
246.828299
Theta
196.734691
Tajima's D
0.606875
CLR
0
CSRT
0.546222688865557
Interpretation
Uncertain
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