Gene

KWMTBOMO06564

Pre Gene Modal

BGIBMGA011657

Annotation

PREDICTED:_lisH_domain_and_HEAT_repeat-containing_protein_KIAA1468-like_[Bombyx_mori]

Location

Bomo_Chr11(+):10548975-10565618      View in EpiBrowser

Location in the cell

Golgi   Reliability : 1.151 Nuclear   Reliability : 1.003 PlasmaMembrane   Reliability : 1.447

CDS

ATGAATCCGTACAAGGAAACAGAGGAGTCATCTTTCGATACACCTCATTTGTCTTATGAGGATATAGCTACAAAACTGCTAAAAGACAACTTCTTCCTGACTGCCTTAGAACTCCACACTGAGCTTGTAGAGAGCGGCAAGGAACTTCCTCAACTTAGAGAATTCTTCTCGAATCCTGGAAATTTTGAACAGCATGTCTCTAGAGCATCTGAATTAAATTCTATACACCGCACTCCAAGTCAAGCAACTTTAGACTCTTTGGACACAGCAAGATATTCAGAAGATGGTGGAGGTGACCGTGGTGGTAGTGGGGGTGACGTGGCTGTTCTAGAATTTGAGCTGCGTAAGGCAAGGGAAACTATTAATTCCCTAAGGGCTAATCTTACACAGTTTGCAGATGGTTCATCAACATTAGATAAAAGTTCCCAAAAAATATGTGACCAGAGATCCTTAAAGCCACATGAGAAGAGAGCACTCAATTTCTTGATTAATGAATATCTACTTATGCAAGATTATAAATTAACTTCAATTACATTTTCTGATGAGAATCCTGATCAGGAATTCGAAGATTGGGATGATGTAGGTTTGAATATGCCTCGACCCGCAGGAATAGTCTCCCTATTCCGAGGAGAGTCAGTATTGAGTGTACCTAAAGTAGACTCATCAACTGAAACAAATTGGCAACAAATAGATGCTGGATGCCAGACTGAACTTGATGAAAGGAGTATTTGTGTCAGTTGCCAGGACTCGATTGATCATGATAATGATTGGGCAGCTGAGCTTCTCATTCAAGCTGAAGAGATAGAAATGCTGAAACAAAAGGCTATGGCCTTAGAGATGGAGAAGCAAAATTTTCAAAAATTGTATGATACTGCTATTGTCAGTTTGAATTCTCTTGCAAGTCCCGCCATCGAGAGCAAAGCCCTTGATTTAAACACAAAAGATGAAAAAATGATTGAAGCCGAACAGGCTATTGATACTACACCAATAACTTGTACGGCTTCAGAGAATCATTACGGGAGTGGAAATTCTACACATAGTGCAACACCAGAACAGTTCGAAATGATTGAGAGTGAAAAGAATAGTACTATCACCAGAAAAGAAGGCTCTACGCTAAGTTCCTTTGAACATACTGTGTTGGGTGAAAATTGTAACAGAGATTCACCGTTGCGGCGCGGTAGTGTCACCACTTTAGACGAAGCCCTTAGCATAAATGATGGAGGCGAGTGGACACGTGTTCAATATGAATACAACAGCATCGAAACTAGTAGTAAGGAAATGTGGATCGACAGTGGTCTACCAAATAGTCTAAAAGTATCAATTCTAAACTGGTGCTGTGAGACGCTGAACCTGAACGAATCATTCTCGAACGATCTTTTAGTAGAACTAATAAACAATGATAAACCAATAACACTGCCTGGGTTTCTAACGCTGGCTGCCGACACTATGCCTAGGATAATCCCTCATACTCTCGTGGCACGACGTTTCGAAGCTGCGGCATTACTAGCAGCGAGCGTGGCTCTGCTCCCGACCGGAGATCCAAGACGCGCTCGCACCTTACACTCATTACTTACACTCGTGAAGAAGCCGGAGCCGTCCGACACGAGATCCATATGTGAAGCGGCGTGTTACATAGTGAAATGGGGAGGCAGCGGGGAAGTGTTGTCCTCCGTAGCTGAATTACTGGCATCGAGATCGGCCGAGCGACGGATCCTCGCCAGCCAGATCTGCGTCGCCATAGCTCCGTACGTTCCGATCGAGCTGTGCACGTCCCTACTGCTCAGTCTAGTGGTGCTGATGTGCGAATCGAACGAGATCGAAATCAGGAGTTTGGCCCTAAAATCCGCGTGCCTAATATGTCCGGTTGCGGAACATAAGTACGCGCAGCTCGAGAATATAATGTTCGGTTTCCTGAAGGATCCGATCGAGAAGCACGTCAAAGATACGGTCAGCATTTTCGGGCCGATACTGGCGAGAAGCGCTCTGATGGCAGGAAAATTCTGTACCGATCTGTGTACACGTATTATGAGAAACGCTGCGAAAGAGAGCTCGGATAATGAATGGAAAAACGCTGCTCTGTATTTAGATCTTATGAAATCTTTAGTATTAGCGAAACTGGCATACGTTATAAACGTACAAATAATCAAAGATGCCACCTCGTCTGACTGTGATATGGAGAATATAATTTTACAAGAGGTACCTTTAGAGGAACAGGAGCATTTCGTGGATTTACAATGCTTCGTAAGCGATGTTGACGCTAAGACGCTGCTGGCTGCTGCGAACCGTCTGGTCAAAGAGAAACCGGACGTTAGATGGCCGGAACTGAACTGGTTTATTGATTTCGTAAAACAAGTCCTAGACTTAGCGACAACTTCAAAAGTTTTAAGTCATCAAACGATGTATGAAAAATTCATTTCATTATTTTCGAGTTATGTGGAGAATTTTGGTGTGAGCTTTACTACCCACATCCTGAACCCGATATTCGTCGATATTATAATGGATCTCGAGCAGAAAATGGAGAAACTTCACACTGTAAATGTCGAAAGCTCTGTGGTGGTCGGTATTTATTCAGTCACAGTGTTGCCAGCGATTGGGAATTATTCACAACACGGAGAATTTTTACAGAAATGGGTAATGTACTGTAGTCTTCGCAGTTTCCCGCCTAAAGTATTATCCATTCCAATGAAGTGGGTTTGCGAACATCGGCCAGACACACTTGATTTTTATTTACAACACCTCAGAGAGTTTGCGGCCAGCAGTTGTGAGAGCGCAAGCGGCAGTTCAGTCCGCGTCTACATCTCCAATATTATCACAGAGTTGTTGAACACAACAGAAATAAACGAGAAATGTATAGAACGACAAGTCCTGCCGGCTGTCGTAGCTCTCTTGCATGACGATGATGTGTCGGTCCGCGAAGTGGCACTCACCTCATGGGGCAGTATGACTCGCACCTGTTTGATCCGAGGGCTGGCGTGCGAAGCGCAGTGCTGGGCCGCGGCCGACGACCTGCTGTGCGGTACACACGTGCTCTCCACGAAGGAAGGGCTGCGAGCGGCCGAGGCACTAACTCTATTGGTGTTGCCCACTGCCGATAGCCACGCCGTCTCAGAGAAAGCGGTGTCGCTACTGTGCGCCCTGTGCGAGCGCGGCCCCGCATGCGCCGAGCGCGTGGCAGCCCTGACGCCGGGCCTGCAGCTGGCGGTGCACCACTGCGGGCGCCACCCGGCCATACTGCCCGCATTAAGAAAATTGGAGGAGGAGGTTCAGTCGCCCGCGCTGTCGCAGCACCGGGCGGCCGTGGAGAGCCTGGTGCAGACGGCGGCCGGCGCGCCCGCCGAGCCCGCGCGCGACCCCCCGCGCCCCGCCAACCTGCTCGCCGCGCAGGAGGTCGGCAGGAGGGTCACGCAGATGTTCCACCAATCCAAGACCAACATCAATTTACAGAATATATTTAAAAAGAAACCGTAG

Protein

MNPYKETEESSFDTPHLSYEDIATKLLKDNFFLTALELHTELVESGKELPQLREFFSNPGNFEQHVSRASELNSIHRTPSQATLDSLDTARYSEDGGGDRGGSGGDVAVLEFELRKARETINSLRANLTQFADGSSTLDKSSQKICDQRSLKPHEKRALNFLINEYLLMQDYKLTSITFSDENPDQEFEDWDDVGLNMPRPAGIVSLFRGESVLSVPKVDSSTETNWQQIDAGCQTELDERSICVSCQDSIDHDNDWAAELLIQAEEIEMLKQKAMALEMEKQNFQKLYDTAIVSLNSLASPAIESKALDLNTKDEKMIEAEQAIDTTPITCTASENHYGSGNSTHSATPEQFEMIESEKNSTITRKEGSTLSSFEHTVLGENCNRDSPLRRGSVTTLDEALSINDGGEWTRVQYEYNSIETSSKEMWIDSGLPNSLKVSILNWCCETLNLNESFSNDLLVELINNDKPITLPGFLTLAADTMPRIIPHTLVARRFEAAALLAASVALLPTGDPRRARTLHSLLTLVKKPEPSDTRSICEAACYIVKWGGSGEVLSSVAELLASRSAERRILASQICVAIAPYVPIELCTSLLLSLVVLMCESNEIEIRSLALKSACLICPVAEHKYAQLENIMFGFLKDPIEKHVKDTVSIFGPILARSALMAGKFCTDLCTRIMRNAAKESSDNEWKNAALYLDLMKSLVLAKLAYVINVQIIKDATSSDCDMENIILQEVPLEEQEHFVDLQCFVSDVDAKTLLAAANRLVKEKPDVRWPELNWFIDFVKQVLDLATTSKVLSHQTMYEKFISLFSSYVENFGVSFTTHILNPIFVDIIMDLEQKMEKLHTVNVESSVVVGIYSVTVLPAIGNYSQHGEFLQKWVMYCSLRSFPPKVLSIPMKWVCEHRPDTLDFYLQHLREFAASSCESASGSSVRVYISNIITELLNTTEINEKCIERQVLPAVVALLHDDDVSVREVALTSWGSMTRTCLIRGLACEAQCWAAADDLLCGTHVLSTKEGLRAAEALTLLVLPTADSHAVSEKAVSLLCALCERGPACAERVAALTPGLQLAVHHCGRHPAILPALRKLEEEVQSPALSQHRAAVESLVQTAAGAPAEPARDPPRPANLLAAQEVGRRVTQMFHQSKTNINLQNIFKKKP

Uniprot

A0A2H1WHP4   A0A212ENW0   A0A194QPH0   A0A067QXL5   D6WGG1   A0A2J7RGN7   + More
A0A310SQF4   F4WNN8   A0A0M9A7E1   A0A3L8DH82   A0A026WUG3   A0A158NV79   A0A195ECD4   A0A195B7N5   A0A2A3EJD5   A0A0J7L7T5   A0A087ZZD5   A0A1Y1KW97   E2BG12   A0A0L7R0Y0   A0A195FVT1   E2AFJ5   A0A232FA99   K7J6L9  

Pubmed

22118469    26354079    24845553    18362917    19820115    21719571    + More
30249741    24508170    21347285    28004739    20798317    28648823    20075255   

EMBL

ODYU01008647    SOQ52412.1    AGBW02013617    OWR43141.1    KQ461190    KPJ07249.1    + More
KK853239    KDR09486.1    KQ971321    EFA00181.1    NEVH01003760    PNF40001.1    KQ761738    OAD57133.1    GL888237    EGI64231.1    KQ435732    KOX77453.1    QOIP01000008    RLU19543.1    KK107109    EZA59311.1    ADTU01002880    KQ979074    KYN22771.1    KQ976565    KYM80526.1    KZ288230    PBC31584.1    LBMM01000342    LBMM01000325    KMR00159.1    KMR01327.1    GEZM01073871    JAV64761.1    GL448096    EFN85414.1    KQ414669    KOC64510.1    KQ981215    KYN44531.1    GL439118    EFN67746.1    NNAY01000544    OXU27774.1    AAZX01001307   

Proteomes

UP000007151    UP000053240    UP000027135    UP000007266    UP000235965    UP000007755    + More
UP000053105    UP000279307    UP000053097    UP000005205    UP000078492    UP000078540    UP000242457    UP000036403    UP000005203    UP000008237    UP000053825    UP000078541    UP000000311    UP000215335    UP000002358   

Pfam

PF02985   HEAT

Interpro

IPR040362   RELCH        + More
IPR006594   LisH       
IPR016024   ARM-type_fold       
IPR021133   HEAT_type_2       
IPR011989   ARM-like       
IPR000357   HEAT       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.10.10    

ProteinModelPortal

A0A2H1WHP4   A0A212ENW0   A0A194QPH0   A0A067QXL5   D6WGG1   A0A2J7RGN7   + More
A0A310SQF4   F4WNN8   A0A0M9A7E1   A0A3L8DH82   A0A026WUG3   A0A158NV79   A0A195ECD4   A0A195B7N5   A0A2A3EJD5   A0A0J7L7T5   A0A087ZZD5   A0A1Y1KW97   E2BG12   A0A0L7R0Y0   A0A195FVT1   E2AFJ5   A0A232FA99   K7J6L9  

KEGG

101739512    no KO assigned | (RefSeq) lisH domain and HEAT repeat-containing protein KIAA1468-like

GO

GO:0005802   GO:0032367   GO:0005515   GO:0005488   GO:0051536   GO:0016791   GO:0006812   GO:0015299   GO:0006419   GO:0015923   GO:0005634   GO:0006260  

PANTHER

PTHR32059  

Length:

1155

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.50129

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00049

outside

1  -  1155

 

 

Pi

266.031945

Theta

186.30439

Tajima's D

1.551926

CLR

0.512259

CSRT

0.797310134493275

Interpretation

Uncertain