Gene

KWMTBOMO06552

Annotation

PREDICTED:_uncharacterized_protein_LOC101735621_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr11(-):10318256-10323264      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.256

CDS

ATGTTTCATGAGGCTTTCCTTGCTGGAATTTGGGGATCTGCTGGAAGCGCTTTGGGGAAGCTAGCTGGAACTGAAAGTGTAGTAGGAGACAGCTATGCTATATCCGGCGTTATCTTGATAATCATGGTCCTCGTTAACACGTGGAGTAGCAGGCATTACTTGCGGTCACTGGACGCTGCACCTAACTCGGTCGCACCCACCGTCATATCCGCAGCTTCTAGCTACGTTCTATCGGGTTTTATAGGAATCGTGTTATTCGAAGAGCCATCAAGTACCCAATGGTGGGCAGGCGCAATTCTCATTATAATGGGGTTAACATTAATTGCCCGACCGAAGGATAGAGATAAATTCACATAA

Protein

MFHEAFLAGIWGSAGSALGKLAGTESVVGDSYAISGVILIIMVLVNTWSSRHYLRSLDAAPNSVAPTVISAASSYVLSGFIGIVLFEEPSSTQWWAGAILIIMGLTLIARPKDRDKFT

Uniprot

A0A194QP20   I4DLL1   S4NS20   A0A194PV55   A0A151X9W8   A0A195DCM3   + More
F4WM10   A0A158N9B2   A0A154NX36   A0A0A9W2M6   A0A195C644   A0A067R360   A0A0C9Q5F3   A0A0P4VJA6   T1ICN3   A0A1W4W9D5   A0A1X2GU96   A0A1L8DK47   A0A068RPE7   A0A1L8DKA2   A0A023F7N6   A0A0Q9XQ28   A0A0V0GCN7   A0A0K8VXE2   A0A034WHB1   A0A1Y1YT04   A0A077X1K0   A0A2G5V2G5   A0A1I7U9V1   A8WT41   A0A2G5V2F0   K7IXZ9   A0A232EZU8   B9H4J7   A0A0P8XW07   A0A0A1UB44  

Pubmed

26354079    22651552    23622113    21719571    21347285    25401762    + More
24845553    27129103    25474469    17994087    25348373    14624247    20075255    28648823    16973872   

EMBL

KQ461190    KPJ07262.1    AK402179    BAM18801.1    GAIX01014252    JAA78308.1    + More
KQ459590    KPI97281.1    KQ982353    KYQ57172.1    KQ980989    KYN10633.1    GL888217    EGI64654.1    ADTU01001369    ADTU01001370    KQ434777    KZC04187.1    GBHO01042881    JAG00723.1    KQ978220    KYM96334.1    KK852729    KDR17550.1    GBYB01009263    JAG79030.1    GDKW01002370    JAI54225.1    ACPB03009858    MCGT01000003    ORX61570.1    GFDF01007278    JAV06806.1    CBTN010000008    CDH50861.1    GFDF01007279    JAV06805.1    GBBI01001452    JAC17260.1    CH933809    KRG06609.1    GECL01000496    JAP05628.1    GDHF01008763    JAI43551.1    GAKP01005412    JAC53540.1    MCFE01000079    ORY00705.1    LK023368    CDS13073.1    PDUG01000002    PIC45973.1    HE601438    CAP23652.1    PIC45972.1    NNAY01001442    OXU23964.1    CM009294    PNT38367.1    CH902618    KPU78888.1    KB206629    ELP89416.1   

Proteomes

UP000053240    UP000053268    UP000075809    UP000078492    UP000007755    UP000005205    + More
UP000076502    UP000078542    UP000027135    UP000015103    UP000192223    UP000242146    UP000027586    UP000009192    UP000193498    UP000230233    UP000095282    UP000008549    UP000002358    UP000215335    UP000006729    UP000007801   

Interpro

IPR039632   TMEM42       

ProteinModelPortal

A0A194QP20   I4DLL1   S4NS20   A0A194PV55   A0A151X9W8   A0A195DCM3   + More
F4WM10   A0A158N9B2   A0A154NX36   A0A0A9W2M6   A0A195C644   A0A067R360   A0A0C9Q5F3   A0A0P4VJA6   T1ICN3   A0A1W4W9D5   A0A1X2GU96   A0A1L8DK47   A0A068RPE7   A0A1L8DKA2   A0A023F7N6   A0A0Q9XQ28   A0A0V0GCN7   A0A0K8VXE2   A0A034WHB1   A0A1Y1YT04   A0A077X1K0   A0A2G5V2G5   A0A1I7U9V1   A8WT41   A0A2G5V2F0   K7IXZ9   A0A232EZU8   B9H4J7   A0A0P8XW07   A0A0A1UB44  

KEGG

101735621    no KO assigned | (RefSeq) transmembrane protein 42-like

GO

GO:0016021  

PANTHER

PTHR31965  

Length:

118

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

64.24527

Exp number, first 60 AAs:

23.73974

Total prob of N-in:

0.13244

POSSIBLE N-term signal

sequence

outside

1  -  26

TMhelix

27  -  49

inside

50  -  61

TMhelix

62  -  84

outside

85  -  93

TMhelix

94  -  111

inside

112  -  118

 

 

Pi

171.494193

Theta

147.796788

Tajima's D

0.460689

CLR

0.755491

CSRT

0.503324833758312

Interpretation

Uncertain