Gene

KWMTBOMO06550

Annotation

PREDICTED:_transmembrane_protein_184B_isoform_X1_[Papilio_xuthus]

Location

Bomo_Chr11(+):10233485-10265569      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.708

CDS

ATGAGTACCACAGATACGGTGAATATAACCGCTCAGCGGATTTCTGAAATTGTTCACGACGTGCTGAAGCCGCTGCAAGAGCCCATATTCCTGCAGACCCGCAGCGCGCAGGTCATCGCGGGAATATTCGTGTTCACGGCTCTATTCATTACTTGCCAACAGATATACCAGCATTTGCGTTGGTACACAAACCCATCAGAGCAACGTTGGATCGTGCGAATCCTATTTATCGTCCCAATATACGGCTGTTACAGCTGGATATCTTTGCTCTTCTTCAATGGAGACTCTTACTACGTTTACTTCTTCACCGTCAGGGATTGTTATGAAGCGTTCGTGATCTATAGCTTCTTGTCCCTGTGCTACGAGTACCTCGGGGGCGAAGGGAACATAATGTCGGAGTTGCGCGGGCGGCCGGTGCGCGCGTCCTGCGTCAACGGCACGTGTTGCCTGGCAGGAGCAACGTACACGATCGGCTTCCTCCGTTTCTGCAAGCAGGCAACCCTACAGTTCTGCCTCATAAAGCCGCTCTGCGCTTTCGTCATCATTTTCTTGCAGGCTTTCGGGCATTACCACGACGGTGACTGGAGTCCCAACGGCGGCTACATTTACATAACGATCATCAATAATTTCTCCGTGAGCTTGGCACTCTACGGCCTGTTCCTCTTCCTCGGAGCCACCAGGGAGATGCTGAAGCCTTTCGATCCAGTTCTGAAGTTCTTCACCGTTAAATCTGTCATCTTCCTTTCGTTCTGGCAAGGCGTCGCCCTGGCCATACTCGAGAAGGCGCAAGTGATCTCCCCGATACTGGACGCGAGCAACGTTCCCACGACGGCCGGTACTGTGTCGGCCGGCTACCAGAACTTCCTGATCTGCATCGAGATGTGCGCCGCGGCGGTGGCGCTGCGGTACGCGTTCCCGGCCGCCGTGTACGTGCACTCGCACCGCGACCCGCACCGCTCCCTCACCATGCAGTCGATCTCCAGCAGCCTCAAGGAGACAATGAATCCCAAGGACATAATGACGGACGCCTTCCACAATTTCCATCCGCAGTACCAGCAGTACACCCAGTACAGCTCCGTAATGCGCGGTCACACGGAATCCGGTAAGCGTGGGGAGGAAGGAGCGGCTCTGGCTCCTCGCCCGCCGCCCCAGCGCGTCGCTACCATCTGCCACGCCACCAATTACCACGAGAAGACTACGCTGCTCAGCTCCGATGACGAATTTCAGTGA

Protein

MSTTDTVNITAQRISEIVHDVLKPLQEPIFLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLFFNGDSYYVYFFTVRDCYEAFVIYSFLSLCYEYLGGEGNIMSELRGRPVRASCVNGTCCLAGATYTIGFLRFCKQATLQFCLIKPLCAFVIIFLQAFGHYHDGDWSPNGGYIYITIINNFSVSLALYGLFLFLGATREMLKPFDPVLKFFTVKSVIFLSFWQGVALAILEKAQVISPILDASNVPTTAGTVSAGYQNFLICIEMCAAAVALRYAFPAAVYVHSHRDPHRSLTMQSISSSLKETMNPKDIMTDAFHNFHPQYQQYTQYSSVMRGHTESGKRGEEGAALAPRPPPQRVATICHATNYHEKTTLLSSDDEFQ

Uniprot

A0A212EQT9   A0A2W1BTU5   A0A2H1V9Q4   A0A2A4J0V3   A0A194PW99   A0A194QQL9   + More
S4P291   A0A026W211   E9IGT2   E2BBR8   E2AVY5   A0A232F6J8   A0A158NDX8   A0A195ESB7   A0A151X4H3   A0A195BR99   A0A195C4Y1   K7J338   A0A195D7Y3   A0A087ZW91   V9I992   A0A1L8DJV6   E0VYV2   A0A0Q9WII3   A0A310SBD2   A0A1I8PB65   A0A0L7QV55   A0A0Q9XD69   A0A1B6C1K0   A0A1I8MCW3   A0A3B0JS68   A0A0M4EA54   A0A1A9WQ14   A0A0R3P479   W8B2N9   U4UN65   A0A0A1WKT1   A0A0K8UAP1   A0A1W4W7T6   A0A1Y1KZ84   A0A0P9AKR9   A0A0J9RLU2   A1A714   A0A1Q3EUK1   A0A067RKV2   B4N2V1   B4IZJ8   B4LHM2   A0A1Q3EUA7   Q17AK3   T1E1I4   A0A023ESF5   A0A1B6JZF4   A0A1I8PB57   A0A1L8EBH3   B4KWA2   A0A084VDN3   A0A336KYG5   A0A1L8DJV2   A0A1L8DK90   A0A2M4BQ87   A0A2M4ALB4   W5JIR3   A0A2M3Z5L2   Q7PNZ7   A0A1I8MCW6   A0A182IZ47   A0A3B0JS73   A0A1A9V4F5   A0A1A9ZLX2   A0A1A9YG16   W8C149   A0A1B6D6W4   A0A0Q5UGX1   D6WF17   A0A1W4WL99   A0A034W2W9   A0A0K8WID9   A0A1Y1KXV4   U5EWE1   V9I7V7   Q2LZX6   B4HBR3   A0A0K8VWX7   A0A0R1DUB7   A0A0A1X2A9   B3MAZ5   B3NBC8   B4PDA8   B4HVV4   B4QMG6   Q960F6   A0A1W4VVC9   A0A1J1I7J5   A0A1B0CP60   A0A0K8TNW0   A0A2S2QNM9   A0A1B6MFA8   D3TQ11   A0A0A9XHN3  

Pubmed

22118469    28756777    26354079    23622113    24508170    30249741    + More
21282665    20798317    28648823    21347285    20075255    20566863    17994087    18057021    25315136    15632085    24495485    23537049    25830018    28004739    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24845553    17510324    24330624    24945155    26483478    24438588    20920257    23761445    12364791    14747013    17210077    18362917    19820115    25348373    17550304    26369729    20353571    25401762   

EMBL

AGBW02013252    OWR43821.1    KZ149971    PZC76056.1    ODYU01001414    SOQ37559.1    + More
NWSH01004467    PCG65070.1    KQ459590    KPI97278.1    KQ461190    KPJ07265.1    GAIX01008596    JAA83964.1    KK107503    QOIP01000006    EZA49611.1    RLU21344.1    GL763054    EFZ20245.1    GL447151    EFN86844.1    GL443213    EFN62407.1    NNAY01000884    OXU26068.1    ADTU01013062    KQ981993    KYN30797.1    KQ982548    KYQ55287.1    KQ976424    KYM88486.1    KQ978251    KYM95929.1    KQ981153    KYN08981.1    JR036530    JR036533    JR036534    JR036536    AEY57201.1    AEY57204.1    AEY57205.1    AEY57207.1    GFDF01007358    JAV06726.1    DS235848    EEB18558.1    CH940647    KRF84457.1    KQ776210    OAD52204.1    KQ414727    KOC62523.1    CH933809    KRG06229.1    KRG06230.1    GEDC01029930    JAS07368.1    OUUW01000009    SPP84974.1    CP012525    ALC44091.1    CH379069    KRT07929.1    GAMC01011145    JAB95410.1    KB632292    ERL91606.1    GBXI01014830    JAC99461.1    GDHF01028610    JAI23704.1    GEZM01075223    JAV64197.1    CH902618    KPU78465.1    KPU78466.1    CM002912    KMY96871.1    KMY96872.1    BT029687    AE014296    ABL75744.1    ABW08437.1    GFDL01016046    JAV18999.1    KK852567    KDR21220.1    CH964062    EDW78690.2    CH916366    EDV97773.1    EDW69575.1    GFDL01016146    JAV18899.1    CH477333    EAT43288.1    GALA01001634    JAA93218.1    JXUM01034619    JXUM01034620    JXUM01034621    JXUM01034622    JXUM01034623    JXUM01034624    JXUM01034625    JXUM01034626    JXUM01034627    JXUM01034628    GAPW01001907    JAC11691.1    GECU01003131    JAT04576.1    GFDG01002896    JAV15903.1    EDW18509.1    ATLV01011631    KE524705    KFB36077.1    UFQS01001036    UFQT01001036    SSX08663.1    SSX28578.1    GFDF01007325    JAV06759.1    GFDF01007324    JAV06760.1    GGFJ01006041    MBW55182.1    GGFK01008201    MBW41522.1    ADMH02001054    ETN64272.1    GGFM01003060    MBW23811.1    AAAB01008960    EAA11279.5    SPP84975.1    GAMC01011146    JAB95409.1    GEDC01022120    GEDC01015885    GEDC01006787    JAS15178.1    JAS21413.1    JAS30511.1    CH954178    KQS43088.1    KQ971319    EFA00467.2    GAKP01010834    JAC48118.1    GDHF01001674    JAI50640.1    GEZM01075224    JAV64196.1    GANO01002987    JAB56884.1    JR036529    JR036531    JR036532    JR036535    AEY57200.1    AEY57202.1    AEY57203.1    AEY57206.1    EAL31161.1    CH479261    EDW39467.1    GDHF01013898    GDHF01008931    JAI38416.1    JAI43383.1    CM000159    KRK00763.1    GBXI01008813    JAD05479.1    EDV40261.1    KPU78467.1    EDV50181.1    EDW92856.1    CH480817    EDW50069.1    CM000363    EDX08823.1    KMY96870.1    AY052085    AAF47516.2    AAK93509.1    CVRI01000043    CRK96232.1    AJWK01021443    AJWK01021444    AJWK01021445    AJWK01021446    GDAI01001549    JAI16054.1    GGMS01010118    MBY79321.1    GEBQ01005402    JAT34575.1    CCAG010008841    EZ423513    ADD19789.1    GBHO01024473    JAG19131.1   

Proteomes

UP000007151    UP000218220    UP000053268    UP000053240    UP000053097    UP000279307    + More
UP000008237    UP000000311    UP000215335    UP000005205    UP000078541    UP000075809    UP000078540    UP000078542    UP000002358    UP000078492    UP000005203    UP000009046    UP000008792    UP000095300    UP000053825    UP000009192    UP000095301    UP000268350    UP000092553    UP000091820    UP000001819    UP000030742    UP000192221    UP000007801    UP000000803    UP000027135    UP000007798    UP000001070    UP000008820    UP000069940    UP000030765    UP000000673    UP000007062    UP000075880    UP000078200    UP000092445    UP000092443    UP000008711    UP000007266    UP000192223    UP000008744    UP000002282    UP000001292    UP000000304    UP000183832    UP000092461    UP000092444   

PRIDE

A1A714    Q960F6   

Pfam

PF03619   Solute_trans_a        + More
PF00675   Peptidase_M16

Interpro

IPR005178   Ostalpha/TMEM184C        + More
IPR011249   Metalloenz_LuxS/M16       
IPR011765   Pept_M16_N       

SUPFAM

SSF63411   SSF63411       

ProteinModelPortal

A0A212EQT9   A0A2W1BTU5   A0A2H1V9Q4   A0A2A4J0V3   A0A194PW99   A0A194QQL9   + More
S4P291   A0A026W211   E9IGT2   E2BBR8   E2AVY5   A0A232F6J8   A0A158NDX8   A0A195ESB7   A0A151X4H3   A0A195BR99   A0A195C4Y1   K7J338   A0A195D7Y3   A0A087ZW91   V9I992   A0A1L8DJV6   E0VYV2   A0A0Q9WII3   A0A310SBD2   A0A1I8PB65   A0A0L7QV55   A0A0Q9XD69   A0A1B6C1K0   A0A1I8MCW3   A0A3B0JS68   A0A0M4EA54   A0A1A9WQ14   A0A0R3P479   W8B2N9   U4UN65   A0A0A1WKT1   A0A0K8UAP1   A0A1W4W7T6   A0A1Y1KZ84   A0A0P9AKR9   A0A0J9RLU2   A1A714   A0A1Q3EUK1   A0A067RKV2   B4N2V1   B4IZJ8   B4LHM2   A0A1Q3EUA7   Q17AK3   T1E1I4   A0A023ESF5   A0A1B6JZF4   A0A1I8PB57   A0A1L8EBH3   B4KWA2   A0A084VDN3   A0A336KYG5   A0A1L8DJV2   A0A1L8DK90   A0A2M4BQ87   A0A2M4ALB4   W5JIR3   A0A2M3Z5L2   Q7PNZ7   A0A1I8MCW6   A0A182IZ47   A0A3B0JS73   A0A1A9V4F5   A0A1A9ZLX2   A0A1A9YG16   W8C149   A0A1B6D6W4   A0A0Q5UGX1   D6WF17   A0A1W4WL99   A0A034W2W9   A0A0K8WID9   A0A1Y1KXV4   U5EWE1   V9I7V7   Q2LZX6   B4HBR3   A0A0K8VWX7   A0A0R1DUB7   A0A0A1X2A9   B3MAZ5   B3NBC8   B4PDA8   B4HVV4   B4QMG6   Q960F6   A0A1W4VVC9   A0A1J1I7J5   A0A1B0CP60   A0A0K8TNW0   A0A2S2QNM9   A0A1B6MFA8   D3TQ11   A0A0A9XHN3  

KEGG

101735892    no KO assigned | (RefSeq) transmembrane protein 184B

GO

GO:0016021   GO:0008039   GO:0050832   GO:0030246   GO:0003824   GO:0046872  

PANTHER

PTHR23423  

Length:

409

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

146.74581

Exp number, first 60 AAs:

20.34108

Total prob of N-in:

0.52492

POSSIBLE N-term signal

sequence

inside

1  -  37

TMhelix

38  -  57

outside

58  -  71

TMhelix

72  -  94

inside

95  -  106

TMhelix

107  -  126

outside

127  -  140

TMhelix

141  -  163

inside

164  -  169

TMhelix

170  -  187

outside

188  -  201

TMhelix

202  -  224

inside

225  -  235

TMhelix

236  -  258

outside

259  -  409

 

 

Pi

22.863864

Theta

170.210315

Tajima's D

0.720272

CLR

0.408296

CSRT

0.576021198940053

Interpretation

Uncertain